RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 MT1HL1P0DM35 61 aa7.53□□□□□ -1.2
PTCHD3-201ENST00000438700 HERC2O95714 4834 aa7.52□□□□□ -1.21
PTCHD3-201ENST00000438700 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
PTCHD3-201ENST00000438700 KRTAP4-5Q9BYR2 181 aa7.51□□□□□ -1.21
PTCHD3-201ENST00000438700 C20orf166-AS1Q96NR2 134 aa7.48□□□□□ -1.21
PTCHD3-201ENST00000438700 A8MUU9 505 aa7.48□□□□□ -1.21
PTCHD3-201ENST00000438700 ABCA13Q86UQ4 5058 aa7.39□□□□□ -1.23
PTCHD3-201ENST00000438700 H3BS24 57 aa7.38□□□□□ -1.23
PTCHD3-201ENST00000438700 H0YAA0 97 aa7.37□□□□□ -1.23
PTCHD3-201ENST00000438700 PCLOQ9Y6V0 5065 aa7.36□□□□□ -1.23
PTCHD3-201ENST00000438700 KRTAP3-1Q9BYR8 98 aa7.34□□□□□ -1.23
PTCHD3-201ENST00000438700 XP32Q5T750 250 aa7.3□□□□□ -1.24
PTCHD3-201ENST00000438700 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
PTCHD3-201ENST00000438700 J3QL48 77 aa7.25□□□□□ -1.25
PTCHD3-201ENST00000438700 CRIPTQ9P021 101 aa7.25□□□□□ -1.25
PTCHD3-201ENST00000438700 A0A1B0GU33 70 aa7.24□□□□□ -1.25
PTCHD3-201ENST00000438700 TPRXLQ17RH7 258 aa7.22□□□□□ -1.25
PTCHD3-201ENST00000438700 COX6B2Q6YFQ2 88 aa7.22□□□□□ -1.25
PTCHD3-201ENST00000438700 KRTAP25-1Q3LHN0 102 aa7.2□□□□□ -1.26
PTCHD3-201ENST00000438700 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
PTCHD3-201ENST00000438700 LPAP08519 4548 aa7.16□□□□□ -1.26
PTCHD3-201ENST00000438700 LRP2P98164 4655 aa7.14□□□□□ -1.27
PTCHD3-201ENST00000438700 ROMO1P60602 79 aa7.09□□□□□ -1.27
PTCHD3-201ENST00000438700 HERC1Q15751 4861 aa7.04□□□□□ -1.28
PTCHD3-201ENST00000438700 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
PTCHD3-201ENST00000438700 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
PTCHD3-201ENST00000438700 S4R3F8 94 aa6.99□□□□□ -1.29
PTCHD3-201ENST00000438700 A0A0D9SG42 100 aa6.98□□□□□ -1.29
PTCHD3-201ENST00000438700 K7ERS5 55 aa6.97□□□□□ -1.29
PTCHD3-201ENST00000438700 P0C880 135 aa6.97□□□□□ -1.29
PTCHD3-201ENST00000438700 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.29
PTCHD3-201ENST00000438700 SEC61BP60468 96 aaKnown RBP6.96□□□□□ -1.3
PTCHD3-201ENST00000438700 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.31
PTCHD3-201ENST00000438700 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
PTCHD3-201ENST00000438700 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
PTCHD3-201ENST00000438700 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
PTCHD3-201ENST00000438700 MUC17Q685J3 4493 aa6.83□□□□□ -1.32
PTCHD3-201ENST00000438700 SPINT4Q6UDR6 99 aa6.8□□□□□ -1.32
PTCHD3-201ENST00000438700 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
PTCHD3-201ENST00000438700 MUC2Q02817 5179 aa6.72□□□□□ -1.33
PTCHD3-201ENST00000438700 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
PTCHD3-201ENST00000438700 NDUFAF8A1L188 74 aa6.65□□□□□ -1.34
PTCHD3-201ENST00000438700 KRTAP12-1P59990 96 aa6.65□□□□□ -1.34
PTCHD3-201ENST00000438700 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
PTCHD3-201ENST00000438700 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
PTCHD3-201ENST00000438700 M0QZ58 72 aa6.56□□□□□ -1.36
PTCHD3-201ENST00000438700 RNF213Q63HN8 5207 aa6.55□□□□□ -1.36
PTCHD3-201ENST00000438700 FLGP20930 4061 aaPredicted RBP6.52□□□□□ -1.37
PTCHD3-201ENST00000438700 R4GN34 69 aa6.5□□□□□ -1.37
PTCHD3-201ENST00000438700 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
PTCHD3-201ENST00000438700 LCE2CQ5TA81 110 aa6.47□□□□□ -1.37
PTCHD3-201ENST00000438700 FAT4Q6V0I7 4981 aa6.44□□□□□ -1.38
PTCHD3-201ENST00000438700 A0A0A0MQY5 61 aa6.37□□□□□ -1.39
PTCHD3-201ENST00000438700 MT1HP80294 61 aa6.33□□□□□ -1.4
PTCHD3-201ENST00000438700 M0R2T5 61 aa6.31□□□□□ -1.4
PTCHD3-201ENST00000438700 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
PTCHD3-201ENST00000438700 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
PTCHD3-201ENST00000438700 MT2AP02795 61 aa6.11□□□□□ -1.43
PTCHD3-201ENST00000438700 KRTAP9-8Q9BYQ0 159 aa6.11□□□□□ -1.43
PTCHD3-201ENST00000438700 MT1FP04733 61 aa6.1□□□□□ -1.43
PTCHD3-201ENST00000438700 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
PTCHD3-201ENST00000438700 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
PTCHD3-201ENST00000438700 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
PTCHD3-201ENST00000438700 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
PTCHD3-201ENST00000438700 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
PTCHD3-201ENST00000438700 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
PTCHD3-201ENST00000438700 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
PTCHD3-201ENST00000438700 TNP1P09430 55 aa5.88□□□□□ -1.47
PTCHD3-201ENST00000438700 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
PTCHD3-201ENST00000438700 LCE2DQ5TA82 110 aaPredicted RBP5.83□□□□□ -1.48
PTCHD3-201ENST00000438700 MT1BP07438 61 aa5.79□□□□□ -1.48
PTCHD3-201ENST00000438700 LCE2BO14633 110 aa5.72□□□□□ -1.49
PTCHD3-201ENST00000438700 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
PTCHD3-201ENST00000438700 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
PTCHD3-201ENST00000438700 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
PTCHD3-201ENST00000438700 MT1XP80297 61 aa5.64□□□□□ -1.51
PTCHD3-201ENST00000438700 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
PTCHD3-201ENST00000438700 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
PTCHD3-201ENST00000438700 USH2AO75445 5202 aa5.59□□□□□ -1.51
PTCHD3-201ENST00000438700 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
PTCHD3-201ENST00000438700 FSIP2Q5CZC0 6907 aa5.5□□□□□ -1.53
PTCHD3-201ENST00000438700 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
PTCHD3-201ENST00000438700 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
PTCHD3-201ENST00000438700 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
PTCHD3-201ENST00000438700 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
PTCHD3-201ENST00000438700 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
PTCHD3-201ENST00000438700 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
PTCHD3-201ENST00000438700 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
PTCHD3-201ENST00000438700 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
PTCHD3-201ENST00000438700 KMT2DO14686 5537 aa5.26□□□□□ -1.57
PTCHD3-201ENST00000438700 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
PTCHD3-201ENST00000438700 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
PTCHD3-201ENST00000438700 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
PTCHD3-201ENST00000438700 FCGBPQ9Y6R7 5405 aaPredicted RBP5.17□□□□□ -1.58
PTCHD3-201ENST00000438700 INE1O15225 51 aa5.13□□□□□ -1.59
PTCHD3-201ENST00000438700 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
PTCHD3-201ENST00000438700 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.01□□□□□ -1.61
PTCHD3-201ENST00000438700 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
PTCHD3-201ENST00000438700 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
PTCHD3-201ENST00000438700 MT1EP04732 61 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms