RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 CXCL6P80162 114 aa8.18□□□□□ -1.1
GTF3A-204ENST00000438571 KRTAP19-8Q3LI54 63 aa8.15□□□□□ -1.1
GTF3A-204ENST00000438571 Q5VV11 94 aa8.15□□□□□ -1.1
GTF3A-204ENST00000438571 S4R3F8 94 aa8.15□□□□□ -1.1
GTF3A-204ENST00000438571 LCA10Q71F78 164 aa8.13□□□□□ -1.11
GTF3A-204ENST00000438571 SPRR2GQ9BYE4 73 aa8.13□□□□□ -1.11
GTF3A-204ENST00000438571 ATP5EP2Q5VTU8 51 aa8.12□□□□□ -1.11
GTF3A-204ENST00000438571 KRTAP4-8A0A0G2JLE6 195 aa8.1□□□□□ -1.11
GTF3A-204ENST00000438571 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.11
GTF3A-204ENST00000438571 MT-ATP8P03928 68 aa8.08□□□□□ -1.12
GTF3A-204ENST00000438571 KRTAP10-5P60370 271 aa8.08□□□□□ -1.12
GTF3A-204ENST00000438571 HIST1H4AP62805 103 aaKnown RBP8.08□□□□□ -1.12
GTF3A-204ENST00000438571 CSAG1Q6PB30 78 aa8.07□□□□□ -1.12
GTF3A-204ENST00000438571 A0A087WVE0 104 aa8.06□□□□□ -1.12
GTF3A-204ENST00000438571 KLKP1Q107X0 134 aa8.02□□□□□ -1.13
GTF3A-204ENST00000438571 MDN1Q9NU22 5596 aa7.98□□□□□ -1.13
GTF3A-204ENST00000438571 KMT2DO14686 5537 aa7.98□□□□□ -1.13
GTF3A-204ENST00000438571 KRTAP20-1Q3LI63 56 aa7.97□□□□□ -1.13
GTF3A-204ENST00000438571 KRTAP5-9P26371 169 aa7.96□□□□□ -1.14
GTF3A-204ENST00000438571 IMUPQ9GZP8 106 aa7.94□□□□□ -1.14
GTF3A-204ENST00000438571 TP53AIP1Q9HCN2 124 aa7.89□□□□□ -1.15
GTF3A-204ENST00000438571 LCE1DQ5T752 114 aa7.87□□□□□ -1.15
GTF3A-204ENST00000438571 CYP4F30PQ9H0H9 118 aa7.85□□□□□ -1.15
GTF3A-204ENST00000438571 SCGB1A1P11684 91 aa7.82□□□□□ -1.16
GTF3A-204ENST00000438571 KRTAP4-7Q9BYR0 210 aa7.82□□□□□ -1.16
GTF3A-204ENST00000438571 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
GTF3A-204ENST00000438571 CRIPTQ9P021 101 aa7.8□□□□□ -1.16
GTF3A-204ENST00000438571 UQCRQO14949 82 aa7.78□□□□□ -1.16
GTF3A-204ENST00000438571 TRAV22A0A0B4J277 110 aa7.75□□□□□ -1.17
GTF3A-204ENST00000438571 H0Y9P7 68 aa7.73□□□□□ -1.17
GTF3A-204ENST00000438571 LOC101927531A0A1B0GV80 90 aa7.72□□□□□ -1.17
GTF3A-204ENST00000438571 ATOX1O00244 68 aa7.7□□□□□ -1.18
GTF3A-204ENST00000438571 TRAV7A0A075B6U4 112 aa7.69□□□□□ -1.18
GTF3A-204ENST00000438571 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
GTF3A-204ENST00000438571 H0YAA0 97 aa7.67□□□□□ -1.18
GTF3A-204ENST00000438571 SMIM20Q8N5G0 67 aa7.67□□□□□ -1.18
GTF3A-204ENST00000438571 MT1XP80297 61 aa7.66□□□□□ -1.18
GTF3A-204ENST00000438571 LCE4AQ5TA78 99 aa7.66□□□□□ -1.18
GTF3A-204ENST00000438571 LINC00208Q96KT6 92 aa7.66□□□□□ -1.18
GTF3A-204ENST00000438571 NDUFC1O43677 76 aa7.65□□□□□ -1.18
GTF3A-204ENST00000438571 KRTAP2-3P0C7H8 128 aa7.65□□□□□ -1.18
GTF3A-204ENST00000438571 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.18
GTF3A-204ENST00000438571 KRTAP2-4Q9BYR9 128 aa7.65□□□□□ -1.18
GTF3A-204ENST00000438571 SPRR2EP22531 72 aa7.64□□□□□ -1.19
GTF3A-204ENST00000438571 SPRR2BP35325 72 aa7.64□□□□□ -1.19
GTF3A-204ENST00000438571 SPRR2AP35326 72 aa7.64□□□□□ -1.19
GTF3A-204ENST00000438571 MP68P56378 58 aa7.64□□□□□ -1.19
GTF3A-204ENST00000438571 ADM2Q7Z4H4 148 aa7.64□□□□□ -1.19
GTF3A-204ENST00000438571 A8MUN3 132 aa7.62□□□□□ -1.19
GTF3A-204ENST00000438571 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
GTF3A-204ENST00000438571 H3BPC8 53 aa7.57□□□□□ -1.2
GTF3A-204ENST00000438571 PRO2289Q9P1D8 64 aa7.55□□□□□ -1.2
GTF3A-204ENST00000438571 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
GTF3A-204ENST00000438571 COX7CP15954 63 aa7.54□□□□□ -1.2
GTF3A-204ENST00000438571 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
GTF3A-204ENST00000438571 ANAPC13Q9BS18 74 aa7.54□□□□□ -1.2
GTF3A-204ENST00000438571 C20orf197Q8N268 126 aa7.53□□□□□ -1.2
GTF3A-204ENST00000438571 LCE1AQ5T7P2 110 aa7.51□□□□□ -1.21
GTF3A-204ENST00000438571 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
GTF3A-204ENST00000438571 KRTAP4-2Q9BYR5 136 aa7.49□□□□□ -1.21
GTF3A-204ENST00000438571 P0C880 135 aa7.48□□□□□ -1.21
GTF3A-204ENST00000438571 KRTAP12-2P59991 146 aa7.47□□□□□ -1.21
GTF3A-204ENST00000438571 KRTAP19-4Q3LI73 84 aa7.44□□□□□ -1.22
GTF3A-204ENST00000438571 CCDC179H3BU77 68 aa7.43□□□□□ -1.22
GTF3A-204ENST00000438571 CYSTM1Q9H1C7 97 aa7.43□□□□□ -1.22
GTF3A-204ENST00000438571 R4GN34 69 aa7.43□□□□□ -1.22
GTF3A-204ENST00000438571 H3BS24 57 aa7.42□□□□□ -1.22
GTF3A-204ENST00000438571 M0QZ58 72 aa7.4□□□□□ -1.22
GTF3A-204ENST00000438571 KRTAP2-2Q9BYT5 123 aa7.4□□□□□ -1.22
GTF3A-204ENST00000438571 KRTAP2-1Q9BYU5 128 aa7.4□□□□□ -1.22
GTF3A-204ENST00000438571 SPRR2DP22532 72 aa7.37□□□□□ -1.23
GTF3A-204ENST00000438571 KRTAP4-11Q9BYQ6 195 aa7.37□□□□□ -1.23
GTF3A-204ENST00000438571 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
GTF3A-204ENST00000438571 H7BZZ5 65 aa7.32□□□□□ -1.24
GTF3A-204ENST00000438571 LINC01554Q52M75 96 aa7.32□□□□□ -1.24
GTF3A-204ENST00000438571 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
GTF3A-204ENST00000438571 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
GTF3A-204ENST00000438571 LCE5AQ5TCM9 118 aa7.25□□□□□ -1.25
GTF3A-204ENST00000438571 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
GTF3A-204ENST00000438571 ACYP2P14621 99 aa7.21□□□□□ -1.26
GTF3A-204ENST00000438571 PCP4P48539 62 aa7.21□□□□□ -1.26
GTF3A-204ENST00000438571 COA5Q86WW8 74 aa7.1□□□□□ -1.27
GTF3A-204ENST00000438571 CHKB-CPT1BH3BT56 60 aa7.08□□□□□ -1.28
GTF3A-204ENST00000438571 TMEM258P61165 79 aa7.08□□□□□ -1.28
GTF3A-204ENST00000438571 ATP5EP56381 51 aaPredicted RBP7.04□□□□□ -1.28
GTF3A-204ENST00000438571 SPTSSBQ8NFR3 76 aa6.97□□□□□ -1.29
GTF3A-204ENST00000438571 DSTQ03001 7570 aaKnown RBP6.95□□□□□ -1.3
GTF3A-204ENST00000438571 KRTAP13-4Q3LI77 160 aa6.91□□□□□ -1.3
GTF3A-204ENST00000438571 GPR98Q8WXG9 6306 aa6.89□□□□□ -1.31
GTF3A-204ENST00000438571 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
GTF3A-204ENST00000438571 KRTAP19-7Q3SYF9 63 aa6.87□□□□□ -1.31
GTF3A-204ENST00000438571 MT1EP04732 61 aa6.81□□□□□ -1.32
GTF3A-204ENST00000438571 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
GTF3A-204ENST00000438571 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
GTF3A-204ENST00000438571 SEC61GP60059 68 aa6.71□□□□□ -1.34
GTF3A-204ENST00000438571 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
GTF3A-204ENST00000438571 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.34
GTF3A-204ENST00000438571 A0A1B0GU69 56 aa6.7□□□□□ -1.34
GTF3A-204ENST00000438571 KRTAP5-3Q6L8H2 238 aa6.66□□□□□ -1.34
GTF3A-204ENST00000438571 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms