RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 PKHD1L1Q86WI1 4243 aa3.39□□□□□ -1.87
SPEN-202ENST00000438066 HSPG2P98160 4391 aa3.39□□□□□ -1.87
SPEN-202ENST00000438066 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
SPEN-202ENST00000438066 LINC00304Q8N9R0 145 aa3.39□□□□□ -1.87
SPEN-202ENST00000438066 TRAV22A0A0B4J277 110 aa3.38□□□□□ -1.87
SPEN-202ENST00000438066 MRPL34Q9BQ48 92 aaKnown RBP3.38□□□□□ -1.87
SPEN-202ENST00000438066 TP53AIP1Q9HCN2 124 aa3.38□□□□□ -1.87
SPEN-202ENST00000438066 A0A1B0GU33 70 aa3.37□□□□□ -1.87
SPEN-202ENST00000438066 H0Y9P7 68 aa3.37□□□□□ -1.87
SPEN-202ENST00000438066 H3BPC8 53 aa3.37□□□□□ -1.87
SPEN-202ENST00000438066 SPAG11AQ6PDA7 123 aa3.37□□□□□ -1.87
SPEN-202ENST00000438066 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
SPEN-202ENST00000438066 FLG2Q5D862 2391 aaPredicted RBP3.36□□□□□ -1.87
SPEN-202ENST00000438066 ATP5EP56381 51 aaPredicted RBP3.36□□□□□ -1.87
SPEN-202ENST00000438066 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
SPEN-202ENST00000438066 LINC00208Q96KT6 92 aa3.36□□□□□ -1.87
SPEN-202ENST00000438066 RPS28P62857 69 aaKnown RBP3.35□□□□□ -1.87
SPEN-202ENST00000438066 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
SPEN-202ENST00000438066 Q5VSD8 79 aa3.35□□□□□ -1.87
SPEN-202ENST00000438066 HRES1P13985 223 aa3.33□□□□□ -1.88
SPEN-202ENST00000438066 SERP1Q9Y6X1 66 aa3.32□□□□□ -1.88
SPEN-202ENST00000438066 LRP1Q07954 4544 aaKnown RBP3.32□□□□□ -1.88
SPEN-202ENST00000438066 RYR1P21817 5038 aa3.31□□□□□ -1.88
SPEN-202ENST00000438066 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
SPEN-202ENST00000438066 TNXBP22105 4242 aa3.31□□□□□ -1.88
SPEN-202ENST00000438066 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
SPEN-202ENST00000438066 CYP4F30PQ9H0H9 118 aa3.3□□□□□ -1.88
SPEN-202ENST00000438066 LOC101927531A0A1B0GV80 90 aa3.28□□□□□ -1.88
SPEN-202ENST00000438066 EPPK1P58107 5090 aaKnown RBP3.28□□□□□ -1.88
SPEN-202ENST00000438066 MYCBP2O75592 4640 aa3.28□□□□□ -1.88
SPEN-202ENST00000438066 DMBT1Q9UGM3 2413 aaPredicted RBP3.28□□□□□ -1.88
SPEN-202ENST00000438066 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
SPEN-202ENST00000438066 PCOTHQ58A44 107 aa3.27□□□□□ -1.89
SPEN-202ENST00000438066 RETNLBQ9BQ08 111 aa3.27□□□□□ -1.89
SPEN-202ENST00000438066 FAT3Q8TDW7 4589 aa3.26□□□□□ -1.89
SPEN-202ENST00000438066 MT1HL1P0DM35 61 aa3.26□□□□□ -1.89
SPEN-202ENST00000438066 C20orf166-AS1Q96NR2 134 aa3.25□□□□□ -1.89
SPEN-202ENST00000438066 C9orf92A6NGG3 77 aa3.24□□□□□ -1.89
SPEN-202ENST00000438066 FP248Q71RG6 208 aaPredicted RBP3.24□□□□□ -1.89
SPEN-202ENST00000438066 BIRC6Q9NR09 4857 aa3.21□□□□□ -1.9
SPEN-202ENST00000438066 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
SPEN-202ENST00000438066 COA5Q86WW8 74 aa3.2□□□□□ -1.9
SPEN-202ENST00000438066 DMAC1Q96GE9 116 aa3.2□□□□□ -1.9
SPEN-202ENST00000438066 C7orf65Q6ZTY9 151 aa3.19□□□□□ -1.9
SPEN-202ENST00000438066 Q1T7F1 81 aa3.17□□□□□ -1.9
SPEN-202ENST00000438066 ACYP2P14621 99 aa3.16□□□□□ -1.9
SPEN-202ENST00000438066 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
SPEN-202ENST00000438066 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
SPEN-202ENST00000438066 SPINK7P58062 85 aa3.14□□□□□ -1.91
SPEN-202ENST00000438066 LCA10Q71F78 164 aa3.14□□□□□ -1.91
SPEN-202ENST00000438066 HERC2O95714 4834 aa3.14□□□□□ -1.91
SPEN-202ENST00000438066 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
SPEN-202ENST00000438066 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
SPEN-202ENST00000438066 LINC01554Q52M75 96 aa3.12□□□□□ -1.91
SPEN-202ENST00000438066 ATP11AUNQ6ZP68 121 aa3.12□□□□□ -1.91
SPEN-202ENST00000438066 ABCA13Q86UQ4 5058 aa3.12□□□□□ -1.91
SPEN-202ENST00000438066 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
SPEN-202ENST00000438066 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
SPEN-202ENST00000438066 LINC01558Q9Y6Z2 57 aa3.1□□□□□ -1.91
SPEN-202ENST00000438066 CHKB-CPT1BH3BT56 60 aa3.09□□□□□ -1.91
SPEN-202ENST00000438066 Q5VV11 94 aa3.09□□□□□ -1.91
SPEN-202ENST00000438066 P0C880 135 aa3.08□□□□□ -1.92
SPEN-202ENST00000438066 LRP2P98164 4655 aa3.08□□□□□ -1.92
SPEN-202ENST00000438066 COX6B2Q6YFQ2 88 aa3.07□□□□□ -1.92
SPEN-202ENST00000438066 PRR15LQ9BU68 103 aa3.07□□□□□ -1.92
SPEN-202ENST00000438066 LPAP08519 4548 aa3.06□□□□□ -1.92
SPEN-202ENST00000438066 PCLOQ9Y6V0 5065 aa3.03□□□□□ -1.92
SPEN-202ENST00000438066 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
SPEN-202ENST00000438066 SPTSSBQ8NFR3 76 aa3.02□□□□□ -1.93
SPEN-202ENST00000438066 A0A1B0GU69 56 aa3□□□□□ -1.93
SPEN-202ENST00000438066 PRO2289Q9P1D8 64 aa3□□□□□ -1.93
SPEN-202ENST00000438066 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
SPEN-202ENST00000438066 H1FX-AS1Q4G0G2 97 aa2.97□□□□□ -1.93
SPEN-202ENST00000438066 CDC42SE1Q9NRR8 79 aa2.97□□□□□ -1.93
SPEN-202ENST00000438066 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.93
SPEN-202ENST00000438066 S4R3F8 94 aa2.96□□□□□ -1.93
SPEN-202ENST00000438066 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
SPEN-202ENST00000438066 HERC1Q15751 4861 aa2.95□□□□□ -1.94
SPEN-202ENST00000438066 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
SPEN-202ENST00000438066 UQCR11O14957 56 aa2.93□□□□□ -1.94
SPEN-202ENST00000438066 KRTAP19-2Q3LHN2 52 aa2.93□□□□□ -1.94
SPEN-202ENST00000438066 SPATA8Q6RVD6 105 aa2.93□□□□□ -1.94
SPEN-202ENST00000438066 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
SPEN-202ENST00000438066 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
SPEN-202ENST00000438066 MIR22HGQ0VDD5 57 aa2.9□□□□□ -1.94
SPEN-202ENST00000438066 H0YAA0 97 aa2.9□□□□□ -1.95
SPEN-202ENST00000438066 CSAG1Q6PB30 78 aa2.88□□□□□ -1.95
SPEN-202ENST00000438066 MUC2Q02817 5179 aa2.86□□□□□ -1.95
SPEN-202ENST00000438066 A6NN06 94 aa2.86□□□□□ -1.95
SPEN-202ENST00000438066 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
SPEN-202ENST00000438066 KRTAP13-4Q3LI77 160 aa2.85□□□□□ -1.95
SPEN-202ENST00000438066 FLGP20930 4061 aaPredicted RBP2.84□□□□□ -1.95
SPEN-202ENST00000438066 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
SPEN-202ENST00000438066 UBR4Q5T4S7 5183 aa2.79□□□□□ -1.96
SPEN-202ENST00000438066 M0QZ58 72 aa2.78□□□□□ -1.96
SPEN-202ENST00000438066 ROMO1P60602 79 aa2.77□□□□□ -1.97
SPEN-202ENST00000438066 A0A0D9SG42 100 aa2.76□□□□□ -1.97
SPEN-202ENST00000438066 RNF213Q63HN8 5207 aa2.75□□□□□ -1.97
SPEN-202ENST00000438066 FAT4Q6V0I7 4981 aa2.74□□□□□ -1.97
SPEN-202ENST00000438066 KRTAP12-1P59990 96 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms