RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
CD4-202ENST00000437800 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
CD4-202ENST00000437800 SPINK1P00995 79 aa8.3□□□□□ -1.08
CD4-202ENST00000437800 KRTAP16-1A8MUX0 517 aa8.27□□□□□ -1.08
CD4-202ENST00000437800 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
CD4-202ENST00000437800 ROMO1P60602 79 aa8.27□□□□□ -1.09
CD4-202ENST00000437800 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
CD4-202ENST00000437800 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
CD4-202ENST00000437800 J3QL48 77 aa8.2□□□□□ -1.1
CD4-202ENST00000437800 HERC1Q15751 4861 aa8.17□□□□□ -1.1
CD4-202ENST00000437800 A8MUU9 505 aa8.12□□□□□ -1.11
CD4-202ENST00000437800 IGKV2D-30A0A075B6S6 120 aa8.06□□□□□ -1.12
CD4-202ENST00000437800 LPAP08519 4548 aa8□□□□□ -1.13
CD4-202ENST00000437800 HMCN2Q8NDA2 5059 aa8□□□□□ -1.13
CD4-202ENST00000437800 P0C880 135 aa7.98□□□□□ -1.13
CD4-202ENST00000437800 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
CD4-202ENST00000437800 H0YAA0 97 aa7.97□□□□□ -1.13
CD4-202ENST00000437800 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
CD4-202ENST00000437800 LRP2P98164 4655 aa7.92□□□□□ -1.14
CD4-202ENST00000437800 A0A0A0MQY5 61 aa7.9□□□□□ -1.15
CD4-202ENST00000437800 A0A1B0GU33 70 aa7.86□□□□□ -1.15
CD4-202ENST00000437800 K7ERS5 55 aa7.86□□□□□ -1.15
CD4-202ENST00000437800 TPRXLQ17RH7 258 aa7.86□□□□□ -1.15
CD4-202ENST00000437800 XP32Q5T750 250 aa7.83□□□□□ -1.16
CD4-202ENST00000437800 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
CD4-202ENST00000437800 KRTAP3-1Q9BYR8 98 aa7.75□□□□□ -1.17
CD4-202ENST00000437800 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
CD4-202ENST00000437800 SPINT4Q6UDR6 99 aa7.73□□□□□ -1.17
CD4-202ENST00000437800 RPL37P61927 97 aaKnown RBP7.72□□□□□ -1.17
CD4-202ENST00000437800 UBR4Q5T4S7 5183 aa7.7□□□□□ -1.18
CD4-202ENST00000437800 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
CD4-202ENST00000437800 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
CD4-202ENST00000437800 NDUFAF8A1L188 74 aa7.66□□□□□ -1.18
CD4-202ENST00000437800 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.18
CD4-202ENST00000437800 MUC2Q02817 5179 aa7.58□□□□□ -1.2
CD4-202ENST00000437800 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
CD4-202ENST00000437800 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
CD4-202ENST00000437800 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
CD4-202ENST00000437800 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
CD4-202ENST00000437800 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
CD4-202ENST00000437800 KRTAP10-6P60371 365 aaPredicted RBP7.39□□□□□ -1.23
CD4-202ENST00000437800 S4R3F8 94 aa7.37□□□□□ -1.23
CD4-202ENST00000437800 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
CD4-202ENST00000437800 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
CD4-202ENST00000437800 A0A0D9SG42 100 aa7.3□□□□□ -1.24
CD4-202ENST00000437800 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
CD4-202ENST00000437800 LUZP6Q538Z0 58 aa7.28□□□□□ -1.24
CD4-202ENST00000437800 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
CD4-202ENST00000437800 FLGP20930 4061 aaPredicted RBP7.23□□□□□ -1.25
CD4-202ENST00000437800 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
CD4-202ENST00000437800 KRTAP12-2P59991 146 aa7.14□□□□□ -1.27
CD4-202ENST00000437800 M0QZ58 72 aa7.08□□□□□ -1.28
CD4-202ENST00000437800 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
CD4-202ENST00000437800 MT1HP80294 61 aa7.04□□□□□ -1.28
CD4-202ENST00000437800 PLAC4Q8WY50 150 aa7□□□□□ -1.29
CD4-202ENST00000437800 M0R2T5 61 aa6.95□□□□□ -1.3
CD4-202ENST00000437800 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
CD4-202ENST00000437800 R4GN34 69 aa6.82□□□□□ -1.32
CD4-202ENST00000437800 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
CD4-202ENST00000437800 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
CD4-202ENST00000437800 MT2AP02795 61 aa6.72□□□□□ -1.33
CD4-202ENST00000437800 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
CD4-202ENST00000437800 MT1FP04733 61 aa6.69□□□□□ -1.34
CD4-202ENST00000437800 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
CD4-202ENST00000437800 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
CD4-202ENST00000437800 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
CD4-202ENST00000437800 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
CD4-202ENST00000437800 SPRR5A0A1B0GTR4 108 aa6.46□□□□□ -1.37
CD4-202ENST00000437800 PRO2289Q9P1D8 64 aa6.46□□□□□ -1.38
CD4-202ENST00000437800 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
CD4-202ENST00000437800 USH2AO75445 5202 aa6.39□□□□□ -1.39
CD4-202ENST00000437800 LCE2BO14633 110 aa6.38□□□□□ -1.39
CD4-202ENST00000437800 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
CD4-202ENST00000437800 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
CD4-202ENST00000437800 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
CD4-202ENST00000437800 TNP1P09430 55 aa6.28□□□□□ -1.4
CD4-202ENST00000437800 INE1O15225 51 aa6.27□□□□□ -1.41
CD4-202ENST00000437800 MT1BP07438 61 aa6.26□□□□□ -1.41
CD4-202ENST00000437800 FSIP2Q5CZC0 6907 aa6.25□□□□□ -1.41
CD4-202ENST00000437800 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
CD4-202ENST00000437800 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
CD4-202ENST00000437800 MT1XP80297 61 aa6.02□□□□□ -1.45
CD4-202ENST00000437800 KRTAP19-6Q3LI70 58 aa6□□□□□ -1.45
CD4-202ENST00000437800 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
CD4-202ENST00000437800 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
CD4-202ENST00000437800 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.45
CD4-202ENST00000437800 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
CD4-202ENST00000437800 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
CD4-202ENST00000437800 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
CD4-202ENST00000437800 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
CD4-202ENST00000437800 KMT2DO14686 5537 aa5.77□□□□□ -1.49
CD4-202ENST00000437800 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
CD4-202ENST00000437800 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
CD4-202ENST00000437800 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
CD4-202ENST00000437800 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
CD4-202ENST00000437800 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
CD4-202ENST00000437800 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
CD4-202ENST00000437800 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
CD4-202ENST00000437800 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
CD4-202ENST00000437800 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms