RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 ACYP2P14621 99 aa5.72□□□□□ -1.49
LINC01516-201ENST00000436140 KTN1-AS1Q86SY8 53 aa5.7□□□□□ -1.5
LINC01516-201ENST00000436140 A8MUN3 132 aa5.69□□□□□ -1.5
LINC01516-201ENST00000436140 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
LINC01516-201ENST00000436140 KRTAP3-1Q9BYR8 98 aa5.67□□□□□ -1.5
LINC01516-201ENST00000436140 Q5VV11 94 aa5.67□□□□□ -1.5
LINC01516-201ENST00000436140 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
LINC01516-201ENST00000436140 TPRXLQ17RH7 258 aa5.64□□□□□ -1.51
LINC01516-201ENST00000436140 A6NN06 94 aa5.63□□□□□ -1.51
LINC01516-201ENST00000436140 LCA10Q71F78 164 aa5.6□□□□□ -1.51
LINC01516-201ENST00000436140 HMCN2Q8NDA2 5059 aa5.6□□□□□ -1.51
LINC01516-201ENST00000436140 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
LINC01516-201ENST00000436140 KRTAP4-1Q9BYQ7 146 aa5.55□□□□□ -1.52
LINC01516-201ENST00000436140 LCE2BO14633 110 aa5.53□□□□□ -1.52
LINC01516-201ENST00000436140 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
LINC01516-201ENST00000436140 H3BS24 57 aa5.52□□□□□ -1.53
LINC01516-201ENST00000436140 SPTSSBQ8NFR3 76 aa5.52□□□□□ -1.53
LINC01516-201ENST00000436140 A0A1B0GU69 56 aa5.51□□□□□ -1.53
LINC01516-201ENST00000436140 A6NED7 52 aa5.51□□□□□ -1.53
LINC01516-201ENST00000436140 SEC61BP60468 96 aaKnown RBP5.5□□□□□ -1.53
LINC01516-201ENST00000436140 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
LINC01516-201ENST00000436140 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.53
LINC01516-201ENST00000436140 S4R3F8 94 aa5.45□□□□□ -1.54
LINC01516-201ENST00000436140 H1FX-AS1Q4G0G2 97 aa5.41□□□□□ -1.54
LINC01516-201ENST00000436140 MUC17Q685J3 4493 aa5.4□□□□□ -1.55
LINC01516-201ENST00000436140 PRAC1Q96KF2 57 aa5.39□□□□□ -1.55
LINC01516-201ENST00000436140 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
LINC01516-201ENST00000436140 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
LINC01516-201ENST00000436140 LINC01554Q52M75 96 aa5.34□□□□□ -1.55
LINC01516-201ENST00000436140 P0C880 135 aa5.33□□□□□ -1.56
LINC01516-201ENST00000436140 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
LINC01516-201ENST00000436140 A0A0D9SG42 100 aa5.31□□□□□ -1.56
LINC01516-201ENST00000436140 A0A1B0GU33 70 aa5.31□□□□□ -1.56
LINC01516-201ENST00000436140 UQCR11O14957 56 aa5.3□□□□□ -1.56
LINC01516-201ENST00000436140 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
LINC01516-201ENST00000436140 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
LINC01516-201ENST00000436140 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
LINC01516-201ENST00000436140 H0YAA0 97 aa5.24□□□□□ -1.57
LINC01516-201ENST00000436140 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
LINC01516-201ENST00000436140 M0R2T5 61 aa5.22□□□□□ -1.57
LINC01516-201ENST00000436140 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
LINC01516-201ENST00000436140 LORP23490 312 aaPredicted RBP5.19□□□□□ -1.58
LINC01516-201ENST00000436140 FSIP2Q5CZC0 6907 aa5.18□□□□□ -1.58
LINC01516-201ENST00000436140 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
LINC01516-201ENST00000436140 FLGP20930 4061 aaPredicted RBP5.13□□□□□ -1.59
LINC01516-201ENST00000436140 SPINT4Q6UDR6 99 aa5.13□□□□□ -1.59
LINC01516-201ENST00000436140 M0QZ58 72 aa5.13□□□□□ -1.59
LINC01516-201ENST00000436140 R4GN34 69 aa5.11□□□□□ -1.59
LINC01516-201ENST00000436140 CRIPTQ9P021 101 aa5.05□□□□□ -1.6
LINC01516-201ENST00000436140 MT1HP80294 61 aa5.05□□□□□ -1.6
LINC01516-201ENST00000436140 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
LINC01516-201ENST00000436140 ROMO1P60602 79 aa5.01□□□□□ -1.61
LINC01516-201ENST00000436140 K7ERS5 55 aa4.98□□□□□ -1.61
LINC01516-201ENST00000436140 USH2AO75445 5202 aa4.97□□□□□ -1.61
LINC01516-201ENST00000436140 KRTAP10-10P60014 251 aa4.96□□□□□ -1.61
LINC01516-201ENST00000436140 KRTAP12-1P59990 96 aa4.95□□□□□ -1.62
LINC01516-201ENST00000436140 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
LINC01516-201ENST00000436140 MT1FP04733 61 aa4.89□□□□□ -1.63
LINC01516-201ENST00000436140 MT2AP02795 61 aa4.87□□□□□ -1.63
LINC01516-201ENST00000436140 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
LINC01516-201ENST00000436140 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
LINC01516-201ENST00000436140 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
LINC01516-201ENST00000436140 KRTAP19-1Q8IUB9 90 aa4.79□□□□□ -1.64
LINC01516-201ENST00000436140 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
LINC01516-201ENST00000436140 PLAC4Q8WY50 150 aa4.71□□□□□ -1.66
LINC01516-201ENST00000436140 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
LINC01516-201ENST00000436140 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
LINC01516-201ENST00000436140 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
LINC01516-201ENST00000436140 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.66
LINC01516-201ENST00000436140 MT1BP07438 61 aa4.59□□□□□ -1.67
LINC01516-201ENST00000436140 KMT2DO14686 5537 aa4.57□□□□□ -1.68
LINC01516-201ENST00000436140 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
LINC01516-201ENST00000436140 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
LINC01516-201ENST00000436140 TNP1P09430 55 aa4.5□□□□□ -1.69
LINC01516-201ENST00000436140 MT1XP80297 61 aa4.47□□□□□ -1.69
LINC01516-201ENST00000436140 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
LINC01516-201ENST00000436140 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
LINC01516-201ENST00000436140 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
LINC01516-201ENST00000436140 LUZP6Q538Z0 58 aa4.4□□□□□ -1.7
LINC01516-201ENST00000436140 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
LINC01516-201ENST00000436140 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
LINC01516-201ENST00000436140 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.71
LINC01516-201ENST00000436140 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.72
LINC01516-201ENST00000436140 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
LINC01516-201ENST00000436140 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
LINC01516-201ENST00000436140 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
LINC01516-201ENST00000436140 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
LINC01516-201ENST00000436140 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
LINC01516-201ENST00000436140 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
LINC01516-201ENST00000436140 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
LINC01516-201ENST00000436140 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
LINC01516-201ENST00000436140 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
LINC01516-201ENST00000436140 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
LINC01516-201ENST00000436140 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
LINC01516-201ENST00000436140 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
LINC01516-201ENST00000436140 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
LINC01516-201ENST00000436140 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
LINC01516-201ENST00000436140 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
LINC01516-201ENST00000436140 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
LINC01516-201ENST00000436140 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms