RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 Q5W150 140 aa5.23□□□□□ -1.57
LINC01007-201ENST00000434537 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
LINC01007-201ENST00000434537 KRTAP13-3Q3SY46 172 aa5.22□□□□□ -1.57
LINC01007-201ENST00000434537 SPTSSBQ8NFR3 76 aa5.22□□□□□ -1.57
LINC01007-201ENST00000434537 A8MUU9 505 aa5.21□□□□□ -1.58
LINC01007-201ENST00000434537 TNXBP22105 4242 aa5.21□□□□□ -1.58
LINC01007-201ENST00000434537 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.58
LINC01007-201ENST00000434537 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.58
LINC01007-201ENST00000434537 ROMO1P60602 79 aa5.19□□□□□ -1.58
LINC01007-201ENST00000434537 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
LINC01007-201ENST00000434537 FLG2Q5D862 2391 aaPredicted RBP5.18□□□□□ -1.58
LINC01007-201ENST00000434537 SPINK7P58062 85 aa5.17□□□□□ -1.58
LINC01007-201ENST00000434537 ACYP2P14621 99 aa5.15□□□□□ -1.58
LINC01007-201ENST00000434537 FAT3Q8TDW7 4589 aa5.13□□□□□ -1.59
LINC01007-201ENST00000434537 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
LINC01007-201ENST00000434537 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
LINC01007-201ENST00000434537 P0C880 135 aa5.09□□□□□ -1.59
LINC01007-201ENST00000434537 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
LINC01007-201ENST00000434537 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
LINC01007-201ENST00000434537 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
LINC01007-201ENST00000434537 C9orf92A6NGG3 77 aa5.07□□□□□ -1.6
LINC01007-201ENST00000434537 A0A1B0GU69 56 aa5.04□□□□□ -1.6
LINC01007-201ENST00000434537 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
LINC01007-201ENST00000434537 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
LINC01007-201ENST00000434537 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
LINC01007-201ENST00000434537 MT1HL1P0DM35 61 aa5□□□□□ -1.61
LINC01007-201ENST00000434537 SPATA8Q6RVD6 105 aa5□□□□□ -1.61
LINC01007-201ENST00000434537 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
LINC01007-201ENST00000434537 UQCR11O14957 56 aa4.96□□□□□ -1.62
LINC01007-201ENST00000434537 RNF213Q63HN8 5207 aa4.9□□□□□ -1.62
LINC01007-201ENST00000434537 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
LINC01007-201ENST00000434537 XP32Q5T750 250 aa4.89□□□□□ -1.63
LINC01007-201ENST00000434537 CSAG1Q6PB30 78 aa4.88□□□□□ -1.63
LINC01007-201ENST00000434537 LPAP08519 4548 aa4.87□□□□□ -1.63
LINC01007-201ENST00000434537 LRP2P98164 4655 aa4.87□□□□□ -1.63
LINC01007-201ENST00000434537 RPL37P61927 97 aaKnown RBP4.86□□□□□ -1.63
LINC01007-201ENST00000434537 TPRXLQ17RH7 258 aa4.8□□□□□ -1.64
LINC01007-201ENST00000434537 A0A1B0GU33 70 aa4.78□□□□□ -1.64
LINC01007-201ENST00000434537 H0YAA0 97 aa4.78□□□□□ -1.64
LINC01007-201ENST00000434537 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
LINC01007-201ENST00000434537 COX6B2Q6YFQ2 88 aa4.76□□□□□ -1.65
LINC01007-201ENST00000434537 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
LINC01007-201ENST00000434537 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.65
LINC01007-201ENST00000434537 R4GN34 69 aa4.69□□□□□ -1.66
LINC01007-201ENST00000434537 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
LINC01007-201ENST00000434537 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.67
LINC01007-201ENST00000434537 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
LINC01007-201ENST00000434537 S4R3F8 94 aa4.61□□□□□ -1.67
LINC01007-201ENST00000434537 MUC2Q02817 5179 aa4.59□□□□□ -1.68
LINC01007-201ENST00000434537 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
LINC01007-201ENST00000434537 KRTAP4-1Q9BYQ7 146 aa4.58□□□□□ -1.68
LINC01007-201ENST00000434537 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
LINC01007-201ENST00000434537 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
LINC01007-201ENST00000434537 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
LINC01007-201ENST00000434537 A0A0D9SG42 100 aa4.49□□□□□ -1.69
LINC01007-201ENST00000434537 KRTAP19-2Q3LHN2 52 aa4.46□□□□□ -1.7
LINC01007-201ENST00000434537 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
LINC01007-201ENST00000434537 FLGP20930 4061 aaPredicted RBP4.43□□□□□ -1.7
LINC01007-201ENST00000434537 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
LINC01007-201ENST00000434537 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
LINC01007-201ENST00000434537 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
LINC01007-201ENST00000434537 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
LINC01007-201ENST00000434537 M0QZ58 72 aa4.32□□□□□ -1.72
LINC01007-201ENST00000434537 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
LINC01007-201ENST00000434537 FSIP2Q5CZC0 6907 aa4.25□□□□□ -1.73
LINC01007-201ENST00000434537 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
LINC01007-201ENST00000434537 MT1HP80294 61 aa4.23□□□□□ -1.73
LINC01007-201ENST00000434537 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
LINC01007-201ENST00000434537 M0R2T5 61 aa4.18□□□□□ -1.74
LINC01007-201ENST00000434537 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
LINC01007-201ENST00000434537 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
LINC01007-201ENST00000434537 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
LINC01007-201ENST00000434537 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
LINC01007-201ENST00000434537 MT2AP02795 61 aa4.06□□□□□ -1.76
LINC01007-201ENST00000434537 MT1FP04733 61 aa4.06□□□□□ -1.76
LINC01007-201ENST00000434537 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
LINC01007-201ENST00000434537 KRTAP10-10P60014 251 aa4.04□□□□□ -1.76
LINC01007-201ENST00000434537 PLAC4Q8WY50 150 aa4.04□□□□□ -1.76
LINC01007-201ENST00000434537 SPRR2GQ9BYE4 73 aa4.04□□□□□ -1.76
LINC01007-201ENST00000434537 SSPOA2VEC9 5147 aa4□□□□□ -1.77
LINC01007-201ENST00000434537 LCE4AQ5TA78 99 aa4□□□□□ -1.77
LINC01007-201ENST00000434537 USH2AO75445 5202 aa3.99□□□□□ -1.77
LINC01007-201ENST00000434537 INE1O15225 51 aa3.98□□□□□ -1.77
LINC01007-201ENST00000434537 PP632Q6XCG6 107 aa3.97□□□□□ -1.77
LINC01007-201ENST00000434537 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
LINC01007-201ENST00000434537 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
LINC01007-201ENST00000434537 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
LINC01007-201ENST00000434537 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
LINC01007-201ENST00000434537 KRTAP19-8Q3LI54 63 aa3.9□□□□□ -1.79
LINC01007-201ENST00000434537 MT1BP07438 61 aa3.87□□□□□ -1.79
LINC01007-201ENST00000434537 TNP1P09430 55 aa3.85□□□□□ -1.79
LINC01007-201ENST00000434537 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
LINC01007-201ENST00000434537 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
LINC01007-201ENST00000434537 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
LINC01007-201ENST00000434537 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
LINC01007-201ENST00000434537 MT1XP80297 61 aa3.78□□□□□ -1.8
LINC01007-201ENST00000434537 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
LINC01007-201ENST00000434537 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
LINC01007-201ENST00000434537 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
LINC01007-201ENST00000434537 NEBP20929 6669 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms