RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 SPATA8Q6RVD6 105 aa6.95□□□□□ -1.3
SCRN1-207ENST00000434476 RYR3Q15413 4870 aa6.95□□□□□ -1.3
SCRN1-207ENST00000434476 UQCR11O14957 56 aa6.94□□□□□ -1.3
SCRN1-207ENST00000434476 XP32Q5T750 250 aa6.93□□□□□ -1.3
SCRN1-207ENST00000434476 LRP1Q07954 4544 aaKnown RBP6.92□□□□□ -1.3
SCRN1-207ENST00000434476 A6NN06 94 aa6.89□□□□□ -1.31
SCRN1-207ENST00000434476 MIR22HGQ0VDD5 57 aa6.89□□□□□ -1.31
SCRN1-207ENST00000434476 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
SCRN1-207ENST00000434476 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
SCRN1-207ENST00000434476 KTN1-AS1Q86SY8 53 aa6.81□□□□□ -1.32
SCRN1-207ENST00000434476 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
SCRN1-207ENST00000434476 TPRXLQ17RH7 258 aa6.8□□□□□ -1.32
SCRN1-207ENST00000434476 A0A1B0GU33 70 aa6.76□□□□□ -1.33
SCRN1-207ENST00000434476 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
SCRN1-207ENST00000434476 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
SCRN1-207ENST00000434476 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.71□□□□□ -1.34
SCRN1-207ENST00000434476 S4R3F8 94 aa6.71□□□□□ -1.34
SCRN1-207ENST00000434476 EPPK1P58107 5090 aaKnown RBP6.69□□□□□ -1.34
SCRN1-207ENST00000434476 H0YAA0 97 aa6.68□□□□□ -1.34
SCRN1-207ENST00000434476 KRTAP9-6A0A140TA67 174 aa6.67□□□□□ -1.34
SCRN1-207ENST00000434476 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
SCRN1-207ENST00000434476 MYCBP2O75592 4640 aa6.67□□□□□ -1.34
SCRN1-207ENST00000434476 RBM12B-AS1Q9P1G2 102 aa6.63□□□□□ -1.35
SCRN1-207ENST00000434476 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
SCRN1-207ENST00000434476 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
SCRN1-207ENST00000434476 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
SCRN1-207ENST00000434476 K7ERS5 55 aa6.53□□□□□ -1.36
SCRN1-207ENST00000434476 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
SCRN1-207ENST00000434476 LRP2P98164 4655 aa6.49□□□□□ -1.37
SCRN1-207ENST00000434476 ADM2Q7Z4H4 148 aa6.47□□□□□ -1.37
SCRN1-207ENST00000434476 P0C880 135 aa6.47□□□□□ -1.37
SCRN1-207ENST00000434476 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
SCRN1-207ENST00000434476 KRTAP13-4Q3LI77 160 aa6.45□□□□□ -1.38
SCRN1-207ENST00000434476 KRTAP4-12Q9BQ66 201 aa6.45□□□□□ -1.38
SCRN1-207ENST00000434476 ABCA13Q86UQ4 5058 aa6.44□□□□□ -1.38
SCRN1-207ENST00000434476 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
SCRN1-207ENST00000434476 LPAP08519 4548 aa6.42□□□□□ -1.38
SCRN1-207ENST00000434476 HERC2O95714 4834 aa6.39□□□□□ -1.39
SCRN1-207ENST00000434476 M0QZ58 72 aa6.39□□□□□ -1.39
SCRN1-207ENST00000434476 A0A0D9SG42 100 aa6.37□□□□□ -1.39
SCRN1-207ENST00000434476 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
SCRN1-207ENST00000434476 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
SCRN1-207ENST00000434476 KRTAP4-1Q9BYQ7 146 aa6.36□□□□□ -1.39
SCRN1-207ENST00000434476 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
SCRN1-207ENST00000434476 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
SCRN1-207ENST00000434476 ROMO1P60602 79 aa6.32□□□□□ -1.4
SCRN1-207ENST00000434476 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
SCRN1-207ENST00000434476 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
SCRN1-207ENST00000434476 LINC01554Q52M75 96 aa6.27□□□□□ -1.41
SCRN1-207ENST00000434476 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
SCRN1-207ENST00000434476 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
SCRN1-207ENST00000434476 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
SCRN1-207ENST00000434476 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
SCRN1-207ENST00000434476 R4GN34 69 aa6.2□□□□□ -1.42
SCRN1-207ENST00000434476 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
SCRN1-207ENST00000434476 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
SCRN1-207ENST00000434476 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
SCRN1-207ENST00000434476 HERC1Q15751 4861 aa6.05□□□□□ -1.44
SCRN1-207ENST00000434476 HMCN2Q8NDA2 5059 aa6.04□□□□□ -1.44
SCRN1-207ENST00000434476 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
SCRN1-207ENST00000434476 FLGP20930 4061 aaPredicted RBP6.03□□□□□ -1.44
SCRN1-207ENST00000434476 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
SCRN1-207ENST00000434476 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
SCRN1-207ENST00000434476 MUC2Q02817 5179 aa5.88□□□□□ -1.47
SCRN1-207ENST00000434476 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
SCRN1-207ENST00000434476 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
SCRN1-207ENST00000434476 MT1HP80294 61 aa5.82□□□□□ -1.48
SCRN1-207ENST00000434476 M0R2T5 61 aa5.8□□□□□ -1.48
SCRN1-207ENST00000434476 SPRR2GQ9BYE4 73 aa5.79□□□□□ -1.48
SCRN1-207ENST00000434476 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
SCRN1-207ENST00000434476 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
SCRN1-207ENST00000434476 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
SCRN1-207ENST00000434476 MT2AP02795 61 aa5.68□□□□□ -1.5
SCRN1-207ENST00000434476 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
SCRN1-207ENST00000434476 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
SCRN1-207ENST00000434476 TNP1P09430 55 aa5.66□□□□□ -1.5
SCRN1-207ENST00000434476 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
SCRN1-207ENST00000434476 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
SCRN1-207ENST00000434476 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.51
SCRN1-207ENST00000434476 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
SCRN1-207ENST00000434476 MT1FP04733 61 aa5.64□□□□□ -1.51
SCRN1-207ENST00000434476 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
SCRN1-207ENST00000434476 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
SCRN1-207ENST00000434476 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
SCRN1-207ENST00000434476 MT1BP07438 61 aa5.45□□□□□ -1.54
SCRN1-207ENST00000434476 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
SCRN1-207ENST00000434476 LCE5AQ5TCM9 118 aa5.43□□□□□ -1.54
SCRN1-207ENST00000434476 KRTAP9-7A8MTY7 169 aa5.39□□□□□ -1.55
SCRN1-207ENST00000434476 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
SCRN1-207ENST00000434476 NDUFAF8A1L188 74 aa5.37□□□□□ -1.55
SCRN1-207ENST00000434476 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
SCRN1-207ENST00000434476 MT1XP80297 61 aa5.36□□□□□ -1.55
SCRN1-207ENST00000434476 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
SCRN1-207ENST00000434476 H3BS24 57 aa5.34□□□□□ -1.55
SCRN1-207ENST00000434476 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
SCRN1-207ENST00000434476 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
SCRN1-207ENST00000434476 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
SCRN1-207ENST00000434476 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
SCRN1-207ENST00000434476 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
SCRN1-207ENST00000434476 KRTAP10-12P60413 245 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms