RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
SEMA3F-206ENST00000434342 KRTAP10-4P60372 401 aaPredicted RBP6.54□□□□□ -1.36
SEMA3F-206ENST00000434342 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
SEMA3F-206ENST00000434342 LUZP6Q538Z0 58 aa6.54□□□□□ -1.36
SEMA3F-206ENST00000434342 KMT2CQ8NEZ4 4911 aaKnown RBP6.51□□□□□ -1.37
SEMA3F-206ENST00000434342 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
SEMA3F-206ENST00000434342 LRP1Q07954 4544 aaKnown RBP6.47□□□□□ -1.37
SEMA3F-206ENST00000434342 RYR2Q92736 4967 aa6.47□□□□□ -1.37
SEMA3F-206ENST00000434342 COX6B2Q6YFQ2 88 aa6.45□□□□□ -1.38
SEMA3F-206ENST00000434342 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
SEMA3F-206ENST00000434342 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
SEMA3F-206ENST00000434342 Q5VSD8 79 aa6.39□□□□□ -1.39
SEMA3F-206ENST00000434342 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
SEMA3F-206ENST00000434342 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
SEMA3F-206ENST00000434342 FAT3Q8TDW7 4589 aa6.32□□□□□ -1.4
SEMA3F-206ENST00000434342 HSPG2P98160 4391 aa6.29□□□□□ -1.4
SEMA3F-206ENST00000434342 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
SEMA3F-206ENST00000434342 KIAA1109Q2LD37 5005 aa6.28□□□□□ -1.4
SEMA3F-206ENST00000434342 TNXBP22105 4242 aa6.28□□□□□ -1.4
SEMA3F-206ENST00000434342 XP32Q5T750 250 aa6.26□□□□□ -1.41
SEMA3F-206ENST00000434342 RYR3Q15413 4870 aa6.25□□□□□ -1.41
SEMA3F-206ENST00000434342 KRTAP17-1Q9BYP8 105 aa6.24□□□□□ -1.41
SEMA3F-206ENST00000434342 RYR1P21817 5038 aa6.24□□□□□ -1.41
SEMA3F-206ENST00000434342 KRTAP3-3Q9BYR6 98 aa6.19□□□□□ -1.42
SEMA3F-206ENST00000434342 S4R3F8 94 aa6.18□□□□□ -1.42
SEMA3F-206ENST00000434342 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
SEMA3F-206ENST00000434342 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
SEMA3F-206ENST00000434342 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
SEMA3F-206ENST00000434342 LRP2P98164 4655 aa6.11□□□□□ -1.43
SEMA3F-206ENST00000434342 LPAP08519 4548 aa6.11□□□□□ -1.43
SEMA3F-206ENST00000434342 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
SEMA3F-206ENST00000434342 EPPK1P58107 5090 aaKnown RBP6.06□□□□□ -1.44
SEMA3F-206ENST00000434342 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
SEMA3F-206ENST00000434342 ABCA13Q86UQ4 5058 aa6□□□□□ -1.45
SEMA3F-206ENST00000434342 J3QL48 77 aa5.99□□□□□ -1.45
SEMA3F-206ENST00000434342 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
SEMA3F-206ENST00000434342 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
SEMA3F-206ENST00000434342 KRTAP12-1P59990 96 aa5.96□□□□□ -1.46
SEMA3F-206ENST00000434342 M0QZ58 72 aa5.82□□□□□ -1.48
SEMA3F-206ENST00000434342 R4GN34 69 aa5.8□□□□□ -1.48
SEMA3F-206ENST00000434342 HERC2O95714 4834 aa5.78□□□□□ -1.48
SEMA3F-206ENST00000434342 KRTAP4-1Q9BYQ7 146 aa5.75□□□□□ -1.49
SEMA3F-206ENST00000434342 MUC2Q02817 5179 aa5.73□□□□□ -1.49
SEMA3F-206ENST00000434342 LORP23490 312 aaPredicted RBP5.71□□□□□ -1.5
SEMA3F-206ENST00000434342 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
SEMA3F-206ENST00000434342 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
SEMA3F-206ENST00000434342 HERC1Q15751 4861 aa5.54□□□□□ -1.52
SEMA3F-206ENST00000434342 KRTAP19-2Q3LHN2 52 aa5.53□□□□□ -1.52
SEMA3F-206ENST00000434342 PCLOQ9Y6V0 5065 aa5.52□□□□□ -1.53
SEMA3F-206ENST00000434342 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
SEMA3F-206ENST00000434342 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
SEMA3F-206ENST00000434342 RNF213Q63HN8 5207 aa5.46□□□□□ -1.53
SEMA3F-206ENST00000434342 FAT4Q6V0I7 4981 aa5.45□□□□□ -1.54
SEMA3F-206ENST00000434342 FLGP20930 4061 aaPredicted RBP5.43□□□□□ -1.54
SEMA3F-206ENST00000434342 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
SEMA3F-206ENST00000434342 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
SEMA3F-206ENST00000434342 UBR4Q5T4S7 5183 aa5.36□□□□□ -1.55
SEMA3F-206ENST00000434342 M0R2T5 61 aa5.35□□□□□ -1.55
SEMA3F-206ENST00000434342 FSIP2Q5CZC0 6907 aa5.33□□□□□ -1.56
SEMA3F-206ENST00000434342 TNP1P09430 55 aa5.25□□□□□ -1.57
SEMA3F-206ENST00000434342 LCE2CQ5TA81 110 aa5.25□□□□□ -1.57
SEMA3F-206ENST00000434342 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
SEMA3F-206ENST00000434342 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
SEMA3F-206ENST00000434342 INE1O15225 51 aa5.15□□□□□ -1.58
SEMA3F-206ENST00000434342 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.58
SEMA3F-206ENST00000434342 MT1HP80294 61 aa5.14□□□□□ -1.59
SEMA3F-206ENST00000434342 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
SEMA3F-206ENST00000434342 MT1FP04733 61 aa5.08□□□□□ -1.6
SEMA3F-206ENST00000434342 MT2AP02795 61 aa5.07□□□□□ -1.6
SEMA3F-206ENST00000434342 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
SEMA3F-206ENST00000434342 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
SEMA3F-206ENST00000434342 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
SEMA3F-206ENST00000434342 MT1BP07438 61 aa4.88□□□□□ -1.63
SEMA3F-206ENST00000434342 KRTAP19-8Q3LI54 63 aa4.88□□□□□ -1.63
SEMA3F-206ENST00000434342 LCE2DQ5TA82 110 aaPredicted RBP4.86□□□□□ -1.63
SEMA3F-206ENST00000434342 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
SEMA3F-206ENST00000434342 MT1XP80297 61 aa4.84□□□□□ -1.63
SEMA3F-206ENST00000434342 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
SEMA3F-206ENST00000434342 USH2AO75445 5202 aa4.78□□□□□ -1.64
SEMA3F-206ENST00000434342 KRTAP10-12P60413 245 aa4.78□□□□□ -1.64
SEMA3F-206ENST00000434342 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
SEMA3F-206ENST00000434342 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
SEMA3F-206ENST00000434342 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
SEMA3F-206ENST00000434342 KMT2DO14686 5537 aa4.67□□□□□ -1.66
SEMA3F-206ENST00000434342 LCE2BO14633 110 aa4.64□□□□□ -1.67
SEMA3F-206ENST00000434342 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
SEMA3F-206ENST00000434342 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
SEMA3F-206ENST00000434342 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
SEMA3F-206ENST00000434342 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
SEMA3F-206ENST00000434342 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
SEMA3F-206ENST00000434342 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
SEMA3F-206ENST00000434342 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
SEMA3F-206ENST00000434342 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
SEMA3F-206ENST00000434342 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
SEMA3F-206ENST00000434342 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
SEMA3F-206ENST00000434342 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
SEMA3F-206ENST00000434342 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
SEMA3F-206ENST00000434342 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
SEMA3F-206ENST00000434342 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
SEMA3F-206ENST00000434342 MT1EP04732 61 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms