RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 KRTAP10-8P60410 259 aa4.28□□□□□ -1.72
CNKSR3-202ENST00000433165 FLG2Q5D862 2391 aaPredicted RBP4.27□□□□□ -1.73
CNKSR3-202ENST00000433165 PKHD1L1Q86WI1 4243 aa4.27□□□□□ -1.73
CNKSR3-202ENST00000433165 SPINK1P00995 79 aa4.24□□□□□ -1.73
CNKSR3-202ENST00000433165 P0C880 135 aa4.23□□□□□ -1.73
CNKSR3-202ENST00000433165 MYCBP2O75592 4640 aa4.23□□□□□ -1.73
CNKSR3-202ENST00000433165 A0A1B0GU33 70 aa4.21□□□□□ -1.74
CNKSR3-202ENST00000433165 TYMSOSQ8TAI1 123 aa4.21□□□□□ -1.74
CNKSR3-202ENST00000433165 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
CNKSR3-202ENST00000433165 H1FX-AS1Q4G0G2 97 aa4.2□□□□□ -1.74
CNKSR3-202ENST00000433165 LCE2DQ5TA82 110 aaPredicted RBP4.2□□□□□ -1.74
CNKSR3-202ENST00000433165 FAT3Q8TDW7 4589 aa4.19□□□□□ -1.74
CNKSR3-202ENST00000433165 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
CNKSR3-202ENST00000433165 K7ERS5 55 aa4.16□□□□□ -1.74
CNKSR3-202ENST00000433165 HERC1Q15751 4861 aa4.14□□□□□ -1.75
CNKSR3-202ENST00000433165 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
CNKSR3-202ENST00000433165 KRTAP3-3Q9BYR6 98 aa4.13□□□□□ -1.75
CNKSR3-202ENST00000433165 KRTAP3-2Q9BYR7 98 aa4.13□□□□□ -1.75
CNKSR3-202ENST00000433165 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
CNKSR3-202ENST00000433165 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
CNKSR3-202ENST00000433165 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
CNKSR3-202ENST00000433165 RPS29P62273 56 aaKnown RBP4.1□□□□□ -1.75
CNKSR3-202ENST00000433165 HMCN2Q8NDA2 5059 aa4.08□□□□□ -1.76
CNKSR3-202ENST00000433165 TNXBP22105 4242 aa4.08□□□□□ -1.76
CNKSR3-202ENST00000433165 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
CNKSR3-202ENST00000433165 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
CNKSR3-202ENST00000433165 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
CNKSR3-202ENST00000433165 C20orf166-AS1Q96NR2 134 aa4.05□□□□□ -1.76
CNKSR3-202ENST00000433165 RPL37P61927 97 aaKnown RBP4.05□□□□□ -1.76
CNKSR3-202ENST00000433165 NDUFAF8A1L188 74 aa4.03□□□□□ -1.77
CNKSR3-202ENST00000433165 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
CNKSR3-202ENST00000433165 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
CNKSR3-202ENST00000433165 C10orf95Q9H7T3 257 aa3.97□□□□□ -1.77
CNKSR3-202ENST00000433165 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.77
CNKSR3-202ENST00000433165 A0A0D9SG42 100 aa3.93□□□□□ -1.78
CNKSR3-202ENST00000433165 C9orf92A6NGG3 77 aa3.93□□□□□ -1.78
CNKSR3-202ENST00000433165 UBR4Q5T4S7 5183 aa3.92□□□□□ -1.78
CNKSR3-202ENST00000433165 XP32Q5T750 250 aa3.91□□□□□ -1.78
CNKSR3-202ENST00000433165 S4R3F8 94 aa3.91□□□□□ -1.78
CNKSR3-202ENST00000433165 LRP2P98164 4655 aa3.91□□□□□ -1.78
CNKSR3-202ENST00000433165 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
CNKSR3-202ENST00000433165 KRTAP12-2P59991 146 aa3.87□□□□□ -1.79
CNKSR3-202ENST00000433165 LPAP08519 4548 aa3.85□□□□□ -1.79
CNKSR3-202ENST00000433165 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
CNKSR3-202ENST00000433165 RNF213Q63HN8 5207 aa3.84□□□□□ -1.8
CNKSR3-202ENST00000433165 MUC17Q685J3 4493 aa3.83□□□□□ -1.8
CNKSR3-202ENST00000433165 LCE2AQ5TA79 106 aaPredicted RBP3.78□□□□□ -1.8
CNKSR3-202ENST00000433165 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
CNKSR3-202ENST00000433165 M0QZ58 72 aa3.74□□□□□ -1.81
CNKSR3-202ENST00000433165 KRTAP4-1Q9BYQ7 146 aa3.73□□□□□ -1.81
CNKSR3-202ENST00000433165 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
CNKSR3-202ENST00000433165 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
CNKSR3-202ENST00000433165 M0R2T5 61 aa3.66□□□□□ -1.82
CNKSR3-202ENST00000433165 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
CNKSR3-202ENST00000433165 MT1HP80294 61 aa3.65□□□□□ -1.82
CNKSR3-202ENST00000433165 MUC2Q02817 5179 aa3.65□□□□□ -1.83
CNKSR3-202ENST00000433165 FAT4Q6V0I7 4981 aa3.65□□□□□ -1.83
CNKSR3-202ENST00000433165 KRTAP19-2Q3LHN2 52 aa3.65□□□□□ -1.83
CNKSR3-202ENST00000433165 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
CNKSR3-202ENST00000433165 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
CNKSR3-202ENST00000433165 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
CNKSR3-202ENST00000433165 R4GN34 69 aa3.55□□□□□ -1.84
CNKSR3-202ENST00000433165 LCE2BO14633 110 aa3.53□□□□□ -1.84
CNKSR3-202ENST00000433165 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
CNKSR3-202ENST00000433165 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
CNKSR3-202ENST00000433165 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
CNKSR3-202ENST00000433165 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
CNKSR3-202ENST00000433165 KRTAP9-8Q9BYQ0 159 aa3.44□□□□□ -1.86
CNKSR3-202ENST00000433165 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
CNKSR3-202ENST00000433165 KRTAP23-1A1A580 65 aa3.41□□□□□ -1.86
CNKSR3-202ENST00000433165 MT2AP02795 61 aa3.41□□□□□ -1.86
CNKSR3-202ENST00000433165 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
CNKSR3-202ENST00000433165 CAMK2N1Q7Z7J9 78 aa3.39□□□□□ -1.87
CNKSR3-202ENST00000433165 MT1FP04733 61 aa3.37□□□□□ -1.87
CNKSR3-202ENST00000433165 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
CNKSR3-202ENST00000433165 KRTAP9-3Q9BYQ3 159 aa3.34□□□□□ -1.87
CNKSR3-202ENST00000433165 TNP1P09430 55 aa3.33□□□□□ -1.88
CNKSR3-202ENST00000433165 INE1O15225 51 aa3.27□□□□□ -1.89
CNKSR3-202ENST00000433165 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
CNKSR3-202ENST00000433165 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
CNKSR3-202ENST00000433165 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
CNKSR3-202ENST00000433165 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
CNKSR3-202ENST00000433165 KRTAP9-7A8MTY7 169 aa3.2□□□□□ -1.9
CNKSR3-202ENST00000433165 USH2AO75445 5202 aa3.19□□□□□ -1.9
CNKSR3-202ENST00000433165 SPRR2GQ9BYE4 73 aa3.18□□□□□ -1.9
CNKSR3-202ENST00000433165 KRTAP19-8Q3LI54 63 aa3.15□□□□□ -1.9
CNKSR3-202ENST00000433165 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
CNKSR3-202ENST00000433165 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
CNKSR3-202ENST00000433165 MT1BP07438 61 aa3.1□□□□□ -1.91
CNKSR3-202ENST00000433165 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.92
CNKSR3-202ENST00000433165 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.92
CNKSR3-202ENST00000433165 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.92
CNKSR3-202ENST00000433165 KRTAP10-5P60370 271 aa3.08□□□□□ -1.92
CNKSR3-202ENST00000433165 KRTAP8-1Q8IUC2 63 aa3.08□□□□□ -1.92
CNKSR3-202ENST00000433165 KRTAP10-12P60413 245 aa2.99□□□□□ -1.93
CNKSR3-202ENST00000433165 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
CNKSR3-202ENST00000433165 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
CNKSR3-202ENST00000433165 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
CNKSR3-202ENST00000433165 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
CNKSR3-202ENST00000433165 MT1XP80297 61 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms