RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 SMR3BP02814 79 aaPredicted RBP3.63□□□□□ -1.83
NIPAL3-205ENST00000432012 LINC00472Q9H8W2 130 aa3.63□□□□□ -1.83
NIPAL3-205ENST00000432012 C9orf163Q8N9P6 203 aa3.63□□□□□ -1.83
NIPAL3-205ENST00000432012 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
NIPAL3-205ENST00000432012 SPRR1BP22528 89 aa3.62□□□□□ -1.83
NIPAL3-205ENST00000432012 FAT1Q14517 4588 aa3.61□□□□□ -1.83
NIPAL3-205ENST00000432012 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
NIPAL3-205ENST00000432012 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
NIPAL3-205ENST00000432012 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
NIPAL3-205ENST00000432012 FAT3Q8TDW7 4589 aa3.6□□□□□ -1.83
NIPAL3-205ENST00000432012 MMP24-AS1A0A0U1RRL7 71 aa3.6□□□□□ -1.83
NIPAL3-205ENST00000432012 LOC101927531A0A1B0GV80 90 aa3.6□□□□□ -1.83
NIPAL3-205ENST00000432012 Q5W150 140 aa3.6□□□□□ -1.83
NIPAL3-205ENST00000432012 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
NIPAL3-205ENST00000432012 KRTAP11-1Q8IUC1 163 aa3.6□□□□□ -1.83
NIPAL3-205ENST00000432012 COA5Q86WW8 74 aa3.59□□□□□ -1.83
NIPAL3-205ENST00000432012 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.83
NIPAL3-205ENST00000432012 FAT4Q6V0I7 4981 aa3.59□□□□□ -1.84
NIPAL3-205ENST00000432012 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
NIPAL3-205ENST00000432012 KRTAP10-1P60331 282 aa3.58□□□□□ -1.84
NIPAL3-205ENST00000432012 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
NIPAL3-205ENST00000432012 LINC00483Q53H64 154 aa3.57□□□□□ -1.84
NIPAL3-205ENST00000432012 PCOTHQ58A44 107 aa3.57□□□□□ -1.84
NIPAL3-205ENST00000432012 TP53AIP1Q9HCN2 124 aa3.57□□□□□ -1.84
NIPAL3-205ENST00000432012 IGLV7-43P04211 117 aa3.56□□□□□ -1.84
NIPAL3-205ENST00000432012 CSAG1Q6PB30 78 aa3.56□□□□□ -1.84
NIPAL3-205ENST00000432012 Q96NJ1 140 aa3.56□□□□□ -1.84
NIPAL3-205ENST00000432012 KRTAP13-1Q8IUC0 172 aa3.55□□□□□ -1.84
NIPAL3-205ENST00000432012 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
NIPAL3-205ENST00000432012 SPAG11AQ6PDA7 123 aa3.53□□□□□ -1.84
NIPAL3-205ENST00000432012 PLAC8Q9NZF1 115 aa3.53□□□□□ -1.84
NIPAL3-205ENST00000432012 R4GN34 69 aa3.53□□□□□ -1.84
NIPAL3-205ENST00000432012 A0A1B0GU33 70 aa3.52□□□□□ -1.85
NIPAL3-205ENST00000432012 A0A087WTM6 91 aa3.51□□□□□ -1.85
NIPAL3-205ENST00000432012 HRES1P13985 223 aa3.51□□□□□ -1.85
NIPAL3-205ENST00000432012 Q6ZRN7 208 aaPredicted RBP3.51□□□□□ -1.85
NIPAL3-205ENST00000432012 LRP2P98164 4655 aa3.51□□□□□ -1.85
NIPAL3-205ENST00000432012 MRPL34Q9BQ48 92 aaKnown RBP3.51□□□□□ -1.85
NIPAL3-205ENST00000432012 MUC2Q02817 5179 aa3.5□□□□□ -1.85
NIPAL3-205ENST00000432012 MT1HL1P0DM35 61 aa3.5□□□□□ -1.85
NIPAL3-205ENST00000432012 SPINK7P58062 85 aa3.49□□□□□ -1.85
NIPAL3-205ENST00000432012 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
NIPAL3-205ENST00000432012 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
NIPAL3-205ENST00000432012 SPACA4Q8TDM5 124 aa3.48□□□□□ -1.85
NIPAL3-205ENST00000432012 KRTAP10-4P60372 401 aaPredicted RBP3.48□□□□□ -1.85
NIPAL3-205ENST00000432012 Q6ZSA8 131 aa3.47□□□□□ -1.85
NIPAL3-205ENST00000432012 TNXBP22105 4242 aa3.47□□□□□ -1.85
NIPAL3-205ENST00000432012 LRP1Q07954 4544 aaKnown RBP3.46□□□□□ -1.86
NIPAL3-205ENST00000432012 KRTAP13-3Q3SY46 172 aa3.45□□□□□ -1.86
NIPAL3-205ENST00000432012 ANAPC11Q9NYG5 84 aa3.45□□□□□ -1.86
NIPAL3-205ENST00000432012 PSORS1C2Q9UIG4 136 aa3.44□□□□□ -1.86
NIPAL3-205ENST00000432012 ACYP2P14621 99 aa3.44□□□□□ -1.86
NIPAL3-205ENST00000432012 SPINK6Q6UWN8 80 aa3.43□□□□□ -1.86
NIPAL3-205ENST00000432012 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
NIPAL3-205ENST00000432012 A0A1B0GU69 56 aa3.39□□□□□ -1.87
NIPAL3-205ENST00000432012 SSBP3-AS1Q7Z2R9 100 aa3.37□□□□□ -1.87
NIPAL3-205ENST00000432012 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
NIPAL3-205ENST00000432012 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
NIPAL3-205ENST00000432012 UQCR11O14957 56 aa3.34□□□□□ -1.87
NIPAL3-205ENST00000432012 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
NIPAL3-205ENST00000432012 TPRXLQ17RH7 258 aa3.32□□□□□ -1.88
NIPAL3-205ENST00000432012 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
NIPAL3-205ENST00000432012 KRTAP13-2Q52LG2 175 aa3.3□□□□□ -1.88
NIPAL3-205ENST00000432012 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
NIPAL3-205ENST00000432012 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
NIPAL3-205ENST00000432012 LINC00304Q8N9R0 145 aa3.26□□□□□ -1.89
NIPAL3-205ENST00000432012 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
NIPAL3-205ENST00000432012 SPINK1P00995 79 aa3.25□□□□□ -1.89
NIPAL3-205ENST00000432012 KRTAP1-4P0C5Y4 121 aa3.25□□□□□ -1.89
NIPAL3-205ENST00000432012 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
NIPAL3-205ENST00000432012 LPAP08519 4548 aa3.23□□□□□ -1.89
NIPAL3-205ENST00000432012 H0YAA0 97 aa3.21□□□□□ -1.9
NIPAL3-205ENST00000432012 RPS29P62273 56 aaKnown RBP3.17□□□□□ -1.9
NIPAL3-205ENST00000432012 MUC17Q685J3 4493 aa3.16□□□□□ -1.9
NIPAL3-205ENST00000432012 H1FX-AS1Q4G0G2 97 aa3.15□□□□□ -1.9
NIPAL3-205ENST00000432012 C9orf92A6NGG3 77 aa3.13□□□□□ -1.91
NIPAL3-205ENST00000432012 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
NIPAL3-205ENST00000432012 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
NIPAL3-205ENST00000432012 COX6B2Q6YFQ2 88 aa3.09□□□□□ -1.91
NIPAL3-205ENST00000432012 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
NIPAL3-205ENST00000432012 MT3P25713 68 aa3.06□□□□□ -1.92
NIPAL3-205ENST00000432012 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
NIPAL3-205ENST00000432012 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
NIPAL3-205ENST00000432012 KRTAP10-6P60371 365 aaPredicted RBP3.05□□□□□ -1.92
NIPAL3-205ENST00000432012 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
NIPAL3-205ENST00000432012 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
NIPAL3-205ENST00000432012 MT1HP80294 61 aa3.02□□□□□ -1.93
NIPAL3-205ENST00000432012 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
NIPAL3-205ENST00000432012 A0A0D9SG42 100 aa2.99□□□□□ -1.93
NIPAL3-205ENST00000432012 S4R3F8 94 aa2.97□□□□□ -1.93
NIPAL3-205ENST00000432012 M0R2T5 61 aa2.97□□□□□ -1.93
NIPAL3-205ENST00000432012 USH2AO75445 5202 aa2.95□□□□□ -1.94
NIPAL3-205ENST00000432012 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
NIPAL3-205ENST00000432012 C10orf95Q9H7T3 257 aa2.94□□□□□ -1.94
NIPAL3-205ENST00000432012 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
NIPAL3-205ENST00000432012 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
NIPAL3-205ENST00000432012 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
NIPAL3-205ENST00000432012 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
NIPAL3-205ENST00000432012 KRTAP4-1Q9BYQ7 146 aa2.93□□□□□ -1.94
NIPAL3-205ENST00000432012 NEBP20929 6669 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms