RNA–Protein interactions for RNA: ENST00000430117.6

CALCOCO1-202, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5 BASIC

Gene CALCOCO1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-202ENST00000430117 J3QL48 77 aa5.7□□□□□ -1.5
CALCOCO1-202ENST00000430117 RYR3Q15413 4870 aa5.69□□□□□ -1.5
CALCOCO1-202ENST00000430117 KRTAP10-1P60331 282 aa5.68□□□□□ -1.5
CALCOCO1-202ENST00000430117 PKD1P98161 4303 aa5.66□□□□□ -1.5
CALCOCO1-202ENST00000430117 PKHD1P08F94 4074 aa5.66□□□□□ -1.5
CALCOCO1-202ENST00000430117 LRP1BQ9NZR2 4599 aa5.65□□□□□ -1.5
CALCOCO1-202ENST00000430117 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
CALCOCO1-202ENST00000430117 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
CALCOCO1-202ENST00000430117 XP32Q5T750 250 aa5.59□□□□□ -1.51
CALCOCO1-202ENST00000430117 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.52
CALCOCO1-202ENST00000430117 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
CALCOCO1-202ENST00000430117 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
CALCOCO1-202ENST00000430117 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
CALCOCO1-202ENST00000430117 DYNC1H1Q14204 4646 aaKnown RBP5.55□□□□□ -1.52
CALCOCO1-202ENST00000430117 KRTAP3-3Q9BYR6 98 aa5.55□□□□□ -1.52
CALCOCO1-202ENST00000430117 A0A1B0GVY2 172 aa5.54□□□□□ -1.52
CALCOCO1-202ENST00000430117 EPPK1P58107 5090 aaKnown RBP5.51□□□□□ -1.53
CALCOCO1-202ENST00000430117 SMR3BP02814 79 aaPredicted RBP5.49□□□□□ -1.53
CALCOCO1-202ENST00000430117 FAT1Q14517 4588 aa5.48□□□□□ -1.53
CALCOCO1-202ENST00000430117 KRTAP10-8P60410 259 aa5.46□□□□□ -1.53
CALCOCO1-202ENST00000430117 APOBP04114 4563 aaKnown RBP5.46□□□□□ -1.54
CALCOCO1-202ENST00000430117 KIAA1109Q2LD37 5005 aa5.42□□□□□ -1.54
CALCOCO1-202ENST00000430117 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
CALCOCO1-202ENST00000430117 HSPG2P98160 4391 aa5.38□□□□□ -1.55
CALCOCO1-202ENST00000430117 KRTAP10-4P60372 401 aaPredicted RBP5.37□□□□□ -1.55
CALCOCO1-202ENST00000430117 RYR1P21817 5038 aa5.34□□□□□ -1.55
CALCOCO1-202ENST00000430117 Q5VSD8 79 aa5.29□□□□□ -1.56
CALCOCO1-202ENST00000430117 RPS29P62273 56 aaKnown RBP5.28□□□□□ -1.56
CALCOCO1-202ENST00000430117 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
CALCOCO1-202ENST00000430117 KRTAP4-5Q9BYR2 181 aa5.27□□□□□ -1.57
CALCOCO1-202ENST00000430117 PKHD1L1Q86WI1 4243 aa5.25□□□□□ -1.57
CALCOCO1-202ENST00000430117 M0QZ58 72 aa5.25□□□□□ -1.57
CALCOCO1-202ENST00000430117 MYCBP2O75592 4640 aa5.24□□□□□ -1.57
CALCOCO1-202ENST00000430117 BIRC6Q9NR09 4857 aa5.24□□□□□ -1.57
CALCOCO1-202ENST00000430117 CAMK2N1Q7Z7J9 78 aa5.21□□□□□ -1.58
CALCOCO1-202ENST00000430117 R4GN34 69 aa5.17□□□□□ -1.58
CALCOCO1-202ENST00000430117 ABCA13Q86UQ4 5058 aa5.16□□□□□ -1.58
CALCOCO1-202ENST00000430117 TNXBP22105 4242 aa5.15□□□□□ -1.59
CALCOCO1-202ENST00000430117 HERC2O95714 4834 aa5.14□□□□□ -1.59
CALCOCO1-202ENST00000430117 FAT3Q8TDW7 4589 aa5.13□□□□□ -1.59
CALCOCO1-202ENST00000430117 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
CALCOCO1-202ENST00000430117 MT1HL1P0DM35 61 aa5.05□□□□□ -1.6
CALCOCO1-202ENST00000430117 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
CALCOCO1-202ENST00000430117 LPAP08519 4548 aa5.04□□□□□ -1.6
CALCOCO1-202ENST00000430117 PCLOQ9Y6V0 5065 aa5.04□□□□□ -1.6
CALCOCO1-202ENST00000430117 LORP23490 312 aaPredicted RBP5.02□□□□□ -1.61
CALCOCO1-202ENST00000430117 HERC1Q15751 4861 aa4.96□□□□□ -1.62
CALCOCO1-202ENST00000430117 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
CALCOCO1-202ENST00000430117 LRP2P98164 4655 aa4.91□□□□□ -1.62
CALCOCO1-202ENST00000430117 INE1O15225 51 aa4.85□□□□□ -1.63
CALCOCO1-202ENST00000430117 TNP1P09430 55 aa4.8□□□□□ -1.64
CALCOCO1-202ENST00000430117 LCE2DQ5TA82 110 aaPredicted RBP4.76□□□□□ -1.65
CALCOCO1-202ENST00000430117 HMCN2Q8NDA2 5059 aa4.76□□□□□ -1.65
CALCOCO1-202ENST00000430117 MUC2Q02817 5179 aa4.7□□□□□ -1.66
CALCOCO1-202ENST00000430117 UBR4Q5T4S7 5183 aa4.67□□□□□ -1.66
CALCOCO1-202ENST00000430117 KRTAP4-1Q9BYQ7 146 aa4.66□□□□□ -1.66
CALCOCO1-202ENST00000430117 RNF213Q63HN8 5207 aa4.63□□□□□ -1.67
CALCOCO1-202ENST00000430117 MUC17Q685J3 4493 aa4.62□□□□□ -1.67
CALCOCO1-202ENST00000430117 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.68
CALCOCO1-202ENST00000430117 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
CALCOCO1-202ENST00000430117 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
CALCOCO1-202ENST00000430117 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
CALCOCO1-202ENST00000430117 FLGP20930 4061 aaPredicted RBP4.43□□□□□ -1.7
CALCOCO1-202ENST00000430117 LCE2CQ5TA81 110 aa4.41□□□□□ -1.7
CALCOCO1-202ENST00000430117 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
CALCOCO1-202ENST00000430117 LCE2BO14633 110 aa4.33□□□□□ -1.72
CALCOCO1-202ENST00000430117 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
CALCOCO1-202ENST00000430117 M0R2T5 61 aa4.27□□□□□ -1.73
CALCOCO1-202ENST00000430117 MT1HP80294 61 aa4.27□□□□□ -1.73
CALCOCO1-202ENST00000430117 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
CALCOCO1-202ENST00000430117 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
CALCOCO1-202ENST00000430117 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
CALCOCO1-202ENST00000430117 KRTAP19-1Q8IUB9 90 aa4.14□□□□□ -1.75
CALCOCO1-202ENST00000430117 MT2AP02795 61 aa4.12□□□□□ -1.75
CALCOCO1-202ENST00000430117 MT1FP04733 61 aa4.12□□□□□ -1.75
CALCOCO1-202ENST00000430117 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
CALCOCO1-202ENST00000430117 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
CALCOCO1-202ENST00000430117 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
CALCOCO1-202ENST00000430117 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
CALCOCO1-202ENST00000430117 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
CALCOCO1-202ENST00000430117 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
CALCOCO1-202ENST00000430117 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
CALCOCO1-202ENST00000430117 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
CALCOCO1-202ENST00000430117 MT1BP07438 61 aa3.94□□□□□ -1.78
CALCOCO1-202ENST00000430117 KRTAP9-3Q9BYQ3 159 aa3.94□□□□□ -1.78
CALCOCO1-202ENST00000430117 USH2AO75445 5202 aa3.94□□□□□ -1.78
CALCOCO1-202ENST00000430117 MT1XP80297 61 aa3.93□□□□□ -1.78
CALCOCO1-202ENST00000430117 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
CALCOCO1-202ENST00000430117 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
CALCOCO1-202ENST00000430117 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
CALCOCO1-202ENST00000430117 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
CALCOCO1-202ENST00000430117 KMT2DO14686 5537 aa3.89□□□□□ -1.79
CALCOCO1-202ENST00000430117 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
CALCOCO1-202ENST00000430117 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
CALCOCO1-202ENST00000430117 KRTAP9-2Q9BYQ4 174 aa3.77□□□□□ -1.81
CALCOCO1-202ENST00000430117 SSPOA2VEC9 5147 aa3.77□□□□□ -1.81
CALCOCO1-202ENST00000430117 KRTAP4-8A0A0G2JLE6 195 aa3.68□□□□□ -1.82
CALCOCO1-202ENST00000430117 KRTAP4-8Q9BYQ9 185 aa3.68□□□□□ -1.82
CALCOCO1-202ENST00000430117 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
CALCOCO1-202ENST00000430117 CRCT1Q9UGL9 99 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms