RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 RPS29P62273 56 aaKnown RBP9.47□□□□□ -0.89
ABCF3-203ENST00000429586 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
ABCF3-203ENST00000429586 ABCA13Q86UQ4 5058 aa9.45□□□□□ -0.9
ABCF3-203ENST00000429586 MT1HL1P0DM35 61 aa9.42□□□□□ -0.9
ABCF3-203ENST00000429586 KRTAP25-1Q3LHN0 102 aa9.41□□□□□ -0.9
ABCF3-203ENST00000429586 HERC2O95714 4834 aa9.38□□□□□ -0.91
ABCF3-203ENST00000429586 A8MUU9 505 aa9.34□□□□□ -0.91
ABCF3-203ENST00000429586 P0C880 135 aa9.33□□□□□ -0.92
ABCF3-203ENST00000429586 C9orf92A6NGG3 77 aa9.33□□□□□ -0.92
ABCF3-203ENST00000429586 KRTAP16-1A8MUX0 517 aa9.31□□□□□ -0.92
ABCF3-203ENST00000429586 IGKV2D-30A0A075B6S6 120 aa9.27□□□□□ -0.93
ABCF3-203ENST00000429586 H0YAA0 97 aa9.22□□□□□ -0.93
ABCF3-203ENST00000429586 PCLOQ9Y6V0 5065 aa9.17□□□□□ -0.94
ABCF3-203ENST00000429586 J3QL48 77 aa9.16□□□□□ -0.94
ABCF3-203ENST00000429586 C20orf166-AS1Q96NR2 134 aa9.08□□□□□ -0.96
ABCF3-203ENST00000429586 A0A1B0GU33 70 aa9.06□□□□□ -0.96
ABCF3-203ENST00000429586 LPAP08519 4548 aa9.05□□□□□ -0.96
ABCF3-203ENST00000429586 XP32Q5T750 250 aa9.03□□□□□ -0.96
ABCF3-203ENST00000429586 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
ABCF3-203ENST00000429586 NDUFAF8A1L188 74 aa9.01□□□□□ -0.97
ABCF3-203ENST00000429586 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
ABCF3-203ENST00000429586 LRP2P98164 4655 aa8.97□□□□□ -0.97
ABCF3-203ENST00000429586 K7ERS5 55 aa8.96□□□□□ -0.98
ABCF3-203ENST00000429586 HERC1Q15751 4861 aa8.95□□□□□ -0.98
ABCF3-203ENST00000429586 TPRXLQ17RH7 258 aa8.94□□□□□ -0.98
ABCF3-203ENST00000429586 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
ABCF3-203ENST00000429586 LUZP6Q538Z0 58 aa8.85□□□□□ -0.99
ABCF3-203ENST00000429586 SPINT4Q6UDR6 99 aa8.84□□□□□ -0.99
ABCF3-203ENST00000429586 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
ABCF3-203ENST00000429586 COX6B2Q6YFQ2 88 aa8.79□□□□□ -1
ABCF3-203ENST00000429586 KRTAP3-1Q9BYR8 98 aa8.78□□□□□ -1
ABCF3-203ENST00000429586 KRTAP15-1Q3LI76 137 aa8.75□□□□□ -1.01
ABCF3-203ENST00000429586 HMCN2Q8NDA2 5059 aa8.74□□□□□ -1.01
ABCF3-203ENST00000429586 C10orf95Q9H7T3 257 aa8.6□□□□□ -1.03
ABCF3-203ENST00000429586 KRTAP4-1Q9BYQ7 146 aa8.59□□□□□ -1.03
ABCF3-203ENST00000429586 MUC2Q02817 5179 aa8.56□□□□□ -1.04
ABCF3-203ENST00000429586 MUC17Q685J3 4493 aa8.55□□□□□ -1.04
ABCF3-203ENST00000429586 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.04
ABCF3-203ENST00000429586 KRTAP13-4Q3LI77 160 aa8.52□□□□□ -1.04
ABCF3-203ENST00000429586 A0A0D9SG42 100 aa8.5□□□□□ -1.05
ABCF3-203ENST00000429586 UBR4Q5T4S7 5183 aa8.46□□□□□ -1.05
ABCF3-203ENST00000429586 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
ABCF3-203ENST00000429586 S4R3F8 94 aa8.39□□□□□ -1.07
ABCF3-203ENST00000429586 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
ABCF3-203ENST00000429586 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
ABCF3-203ENST00000429586 KRTAP12-2P59991 146 aa8.31□□□□□ -1.08
ABCF3-203ENST00000429586 KRTAP19-2Q3LHN2 52 aa8.29□□□□□ -1.08
ABCF3-203ENST00000429586 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
ABCF3-203ENST00000429586 FAT4Q6V0I7 4981 aa8.17□□□□□ -1.1
ABCF3-203ENST00000429586 FLGP20930 4061 aaPredicted RBP8.16□□□□□ -1.1
ABCF3-203ENST00000429586 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
ABCF3-203ENST00000429586 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
ABCF3-203ENST00000429586 M0QZ58 72 aa7.98□□□□□ -1.13
ABCF3-203ENST00000429586 MT1HP80294 61 aa7.94□□□□□ -1.14
ABCF3-203ENST00000429586 M0R2T5 61 aa7.91□□□□□ -1.14
ABCF3-203ENST00000429586 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
ABCF3-203ENST00000429586 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
ABCF3-203ENST00000429586 R4GN34 69 aa7.7□□□□□ -1.18
ABCF3-203ENST00000429586 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.19
ABCF3-203ENST00000429586 MT2AP02795 61 aa7.64□□□□□ -1.19
ABCF3-203ENST00000429586 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
ABCF3-203ENST00000429586 MT1FP04733 61 aa7.62□□□□□ -1.19
ABCF3-203ENST00000429586 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
ABCF3-203ENST00000429586 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
ABCF3-203ENST00000429586 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
ABCF3-203ENST00000429586 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
ABCF3-203ENST00000429586 SPRR2GQ9BYE4 73 aa7.42□□□□□ -1.22
ABCF3-203ENST00000429586 SPRR5A0A1B0GTR4 108 aa7.4□□□□□ -1.22
ABCF3-203ENST00000429586 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
ABCF3-203ENST00000429586 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
ABCF3-203ENST00000429586 KRTAP19-8Q3LI54 63 aa7.21□□□□□ -1.25
ABCF3-203ENST00000429586 LCE2BO14633 110 aa7.2□□□□□ -1.26
ABCF3-203ENST00000429586 MT1BP07438 61 aa7.19□□□□□ -1.26
ABCF3-203ENST00000429586 USH2AO75445 5202 aa7.14□□□□□ -1.27
ABCF3-203ENST00000429586 TNP1P09430 55 aa7.14□□□□□ -1.27
ABCF3-203ENST00000429586 INE1O15225 51 aa7.06□□□□□ -1.28
ABCF3-203ENST00000429586 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
ABCF3-203ENST00000429586 MT1XP80297 61 aa6.96□□□□□ -1.3
ABCF3-203ENST00000429586 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
ABCF3-203ENST00000429586 SSPOA2VEC9 5147 aa6.87□□□□□ -1.31
ABCF3-203ENST00000429586 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
ABCF3-203ENST00000429586 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
ABCF3-203ENST00000429586 LCE3AQ5TA76 89 aa6.67□□□□□ -1.34
ABCF3-203ENST00000429586 KRTAP19-6Q3LI70 58 aa6.66□□□□□ -1.34
ABCF3-203ENST00000429586 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
ABCF3-203ENST00000429586 KMT2DO14686 5537 aa6.63□□□□□ -1.35
ABCF3-203ENST00000429586 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
ABCF3-203ENST00000429586 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
ABCF3-203ENST00000429586 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
ABCF3-203ENST00000429586 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
ABCF3-203ENST00000429586 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
ABCF3-203ENST00000429586 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
ABCF3-203ENST00000429586 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
ABCF3-203ENST00000429586 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
ABCF3-203ENST00000429586 MACF1Q9UPN3 7388 aaKnown RBP6.29□□□□□ -1.4
ABCF3-203ENST00000429586 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
ABCF3-203ENST00000429586 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.42
ABCF3-203ENST00000429586 MUC12Q9UKN1 5478 aa6.11□□□□□ -1.43
ABCF3-203ENST00000429586 KRTAP9-6A0A140TA67 174 aa6.09□□□□□ -1.43
ABCF3-203ENST00000429586 MT1EP04732 61 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms