RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 LCE2BO14633 110 aa8.48□□□□□ -1.05
LINC00887-203ENST00000429578 H1FX-AS1Q4G0G2 97 aa8.48□□□□□ -1.05
LINC00887-203ENST00000429578 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
LINC00887-203ENST00000429578 A8MUN3 132 aa8.47□□□□□ -1.05
LINC00887-203ENST00000429578 TMEM258P61165 79 aa8.46□□□□□ -1.05
LINC00887-203ENST00000429578 PMAIP1Q13794 54 aa8.45□□□□□ -1.06
LINC00887-203ENST00000429578 DMAC1Q96GE9 116 aa8.44□□□□□ -1.06
LINC00887-203ENST00000429578 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
LINC00887-203ENST00000429578 H3BS24 57 aa8.42□□□□□ -1.06
LINC00887-203ENST00000429578 MT1HP80294 61 aa8.4□□□□□ -1.06
LINC00887-203ENST00000429578 FLGP20930 4061 aaPredicted RBP8.4□□□□□ -1.06
LINC00887-203ENST00000429578 ACYP2P14621 99 aa8.35□□□□□ -1.07
LINC00887-203ENST00000429578 S4R3F8 94 aa8.34□□□□□ -1.07
LINC00887-203ENST00000429578 LCA10Q71F78 164 aa8.31□□□□□ -1.08
LINC00887-203ENST00000429578 M0R2T5 61 aa8.28□□□□□ -1.08
LINC00887-203ENST00000429578 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
LINC00887-203ENST00000429578 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
LINC00887-203ENST00000429578 LORP23490 312 aaPredicted RBP8.25□□□□□ -1.09
LINC00887-203ENST00000429578 BRK1Q8WUW1 75 aa8.22□□□□□ -1.09
LINC00887-203ENST00000429578 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
LINC00887-203ENST00000429578 CRCT1Q9UGL9 99 aa8.2□□□□□ -1.1
LINC00887-203ENST00000429578 FSIP2Q5CZC0 6907 aa8.2□□□□□ -1.1
LINC00887-203ENST00000429578 SMIM26A0A096LP01 95 aa8.2□□□□□ -1.1
LINC00887-203ENST00000429578 CHKB-CPT1BH3BT56 60 aa8.2□□□□□ -1.1
LINC00887-203ENST00000429578 COA5Q86WW8 74 aa8.2□□□□□ -1.1
LINC00887-203ENST00000429578 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
LINC00887-203ENST00000429578 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
LINC00887-203ENST00000429578 KTN1-AS1Q86SY8 53 aa8.03□□□□□ -1.12
LINC00887-203ENST00000429578 KRTAP9-8Q9BYQ0 159 aa8.03□□□□□ -1.12
LINC00887-203ENST00000429578 H0YAA0 97 aa8□□□□□ -1.13
LINC00887-203ENST00000429578 A0A0A0MQY5 61 aa7.98□□□□□ -1.13
LINC00887-203ENST00000429578 MT2AP02795 61 aa7.98□□□□□ -1.13
LINC00887-203ENST00000429578 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
LINC00887-203ENST00000429578 MT1FP04733 61 aa7.92□□□□□ -1.14
LINC00887-203ENST00000429578 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
LINC00887-203ENST00000429578 P0C880 135 aa7.83□□□□□ -1.16
LINC00887-203ENST00000429578 USH2AO75445 5202 aa7.79□□□□□ -1.16
LINC00887-203ENST00000429578 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
LINC00887-203ENST00000429578 A0A1B0GU69 56 aa7.78□□□□□ -1.16
LINC00887-203ENST00000429578 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
LINC00887-203ENST00000429578 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
LINC00887-203ENST00000429578 SSPOA2VEC9 5147 aa7.73□□□□□ -1.17
LINC00887-203ENST00000429578 Q1T7F1 81 aa7.72□□□□□ -1.17
LINC00887-203ENST00000429578 PRR15LQ9BU68 103 aa7.71□□□□□ -1.18
LINC00887-203ENST00000429578 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
LINC00887-203ENST00000429578 R4GN34 69 aa7.68□□□□□ -1.18
LINC00887-203ENST00000429578 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
LINC00887-203ENST00000429578 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.64□□□□□ -1.19
LINC00887-203ENST00000429578 M0QZ58 72 aa7.64□□□□□ -1.19
LINC00887-203ENST00000429578 A0A1B0GU33 70 aa7.64□□□□□ -1.19
LINC00887-203ENST00000429578 PSPHP1O15172 72 aa7.58□□□□□ -1.2
LINC00887-203ENST00000429578 LINC01554Q52M75 96 aa7.58□□□□□ -1.2
LINC00887-203ENST00000429578 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
LINC00887-203ENST00000429578 A6NN06 94 aa7.57□□□□□ -1.2
LINC00887-203ENST00000429578 KRTAP13-4Q3LI77 160 aa7.57□□□□□ -1.2
LINC00887-203ENST00000429578 FCGBPQ9Y6R7 5405 aaPredicted RBP7.57□□□□□ -1.2
LINC00887-203ENST00000429578 Q5VV11 94 aa7.53□□□□□ -1.2
LINC00887-203ENST00000429578 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.21
LINC00887-203ENST00000429578 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.21
LINC00887-203ENST00000429578 UQCR11O14957 56 aa7.48□□□□□ -1.21
LINC00887-203ENST00000429578 MT1BP07438 61 aa7.44□□□□□ -1.22
LINC00887-203ENST00000429578 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
LINC00887-203ENST00000429578 A0A0D9SG42 100 aa7.38□□□□□ -1.23
LINC00887-203ENST00000429578 MIR22HGQ0VDD5 57 aa7.36□□□□□ -1.23
LINC00887-203ENST00000429578 A6NED7 52 aa7.35□□□□□ -1.23
LINC00887-203ENST00000429578 A8MU10 97 aa7.35□□□□□ -1.23
LINC00887-203ENST00000429578 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
LINC00887-203ENST00000429578 MACF1Q9UPN3 7388 aaKnown RBP7.33□□□□□ -1.24
LINC00887-203ENST00000429578 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
LINC00887-203ENST00000429578 KRTAP12-1P59990 96 aa7.27□□□□□ -1.25
LINC00887-203ENST00000429578 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
LINC00887-203ENST00000429578 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
LINC00887-203ENST00000429578 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
LINC00887-203ENST00000429578 CAMK2N1Q7Z7J9 78 aa7.15□□□□□ -1.27
LINC00887-203ENST00000429578 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
LINC00887-203ENST00000429578 MT1XP80297 61 aa7.12□□□□□ -1.27
LINC00887-203ENST00000429578 KRTAP6-3Q3LI67 103 aa7.11□□□□□ -1.27
LINC00887-203ENST00000429578 PRO2289Q9P1D8 64 aa7.11□□□□□ -1.27
LINC00887-203ENST00000429578 LOC100996750A0A140TA64 210 aa7.1□□□□□ -1.27
LINC00887-203ENST00000429578 KRTAP4-6Q9BYQ5 205 aa7.1□□□□□ -1.27
LINC00887-203ENST00000429578 K7ERS5 55 aa7.1□□□□□ -1.27
LINC00887-203ENST00000429578 PRAC1Q96KF2 57 aa7.06□□□□□ -1.28
LINC00887-203ENST00000429578 ROMO1P60602 79 aa7.01□□□□□ -1.29
LINC00887-203ENST00000429578 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.31
LINC00887-203ENST00000429578 MUC12Q9UKN1 5478 aa6.87□□□□□ -1.31
LINC00887-203ENST00000429578 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
LINC00887-203ENST00000429578 NEBP20929 6669 aa6.81□□□□□ -1.32
LINC00887-203ENST00000429578 KRTAP10-7P60409 375 aaPredicted RBP6.81□□□□□ -1.32
LINC00887-203ENST00000429578 KRTAP10-12P60413 245 aa6.77□□□□□ -1.33
LINC00887-203ENST00000429578 TNP1P09430 55 aa6.76□□□□□ -1.33
LINC00887-203ENST00000429578 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
LINC00887-203ENST00000429578 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
LINC00887-203ENST00000429578 KMT2DO14686 5537 aa6.67□□□□□ -1.34
LINC00887-203ENST00000429578 MDN1Q9NU22 5596 aa6.64□□□□□ -1.35
LINC00887-203ENST00000429578 KRTAP20-1Q3LI63 56 aa6.64□□□□□ -1.35
LINC00887-203ENST00000429578 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
LINC00887-203ENST00000429578 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
LINC00887-203ENST00000429578 SPRR2FQ96RM1 72 aa6.55□□□□□ -1.36
LINC00887-203ENST00000429578 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
LINC00887-203ENST00000429578 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms