RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 A8MU10 97 aa10.21□□□□□ -0.77
CASC4-203ENST00000429162 SEC61GP60059 68 aa10.19□□□□□ -0.78
CASC4-203ENST00000429162 J3QL48 77 aa10.17□□□□□ -0.78
CASC4-203ENST00000429162 PCLOQ9Y6V0 5065 aa10.14□□□□□ -0.79
CASC4-203ENST00000429162 UQCR11O14957 56 aa10.11□□□□□ -0.79
CASC4-203ENST00000429162 SPATA8Q6RVD6 105 aa10.04□□□□□ -0.8
CASC4-203ENST00000429162 MIR22HGQ0VDD5 57 aa10.03□□□□□ -0.8
CASC4-203ENST00000429162 S4R3F8 94 aa10.03□□□□□ -0.8
CASC4-203ENST00000429162 LRP2P98164 4655 aa10.02□□□□□ -0.8
CASC4-203ENST00000429162 LPAP08519 4548 aa10□□□□□ -0.81
CASC4-203ENST00000429162 SEC61BP60468 96 aaKnown RBP9.99□□□□□ -0.81
CASC4-203ENST00000429162 PMAIP1Q13794 54 aa9.99□□□□□ -0.81
CASC4-203ENST00000429162 H1FX-AS1Q4G0G2 97 aa9.99□□□□□ -0.81
CASC4-203ENST00000429162 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
CASC4-203ENST00000429162 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
CASC4-203ENST00000429162 A0A1B0GU33 70 aa9.9□□□□□ -0.82
CASC4-203ENST00000429162 A6NN06 94 aa9.88□□□□□ -0.83
CASC4-203ENST00000429162 H0YAA0 97 aa9.82□□□□□ -0.84
CASC4-203ENST00000429162 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
CASC4-203ENST00000429162 MUC17Q685J3 4493 aa9.75□□□□□ -0.85
CASC4-203ENST00000429162 CSAG1Q6PB30 78 aa9.74□□□□□ -0.85
CASC4-203ENST00000429162 HERC1Q15751 4861 aa9.73□□□□□ -0.85
CASC4-203ENST00000429162 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
CASC4-203ENST00000429162 KTN1-AS1Q86SY8 53 aa9.72□□□□□ -0.85
CASC4-203ENST00000429162 KRTAP4-1Q9BYQ7 146 aa9.7□□□□□ -0.86
CASC4-203ENST00000429162 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
CASC4-203ENST00000429162 P0C880 135 aa9.62□□□□□ -0.87
CASC4-203ENST00000429162 KRTAP13-4Q3LI77 160 aa9.55□□□□□ -0.88
CASC4-203ENST00000429162 K7ERS5 55 aa9.52□□□□□ -0.88
CASC4-203ENST00000429162 KRTAP19-2Q3LHN2 52 aa9.51□□□□□ -0.89
CASC4-203ENST00000429162 HMCN2Q8NDA2 5059 aa9.51□□□□□ -0.89
CASC4-203ENST00000429162 A0A0D9SG42 100 aa9.44□□□□□ -0.9
CASC4-203ENST00000429162 M0QZ58 72 aa9.41□□□□□ -0.9
CASC4-203ENST00000429162 PRAC1Q96KF2 57 aa9.32□□□□□ -0.92
CASC4-203ENST00000429162 R4GN34 69 aa9.26□□□□□ -0.93
CASC4-203ENST00000429162 FLGP20930 4061 aaPredicted RBP9.24□□□□□ -0.93
CASC4-203ENST00000429162 MUC2Q02817 5179 aa9.22□□□□□ -0.93
CASC4-203ENST00000429162 KRTAP12-1P59990 96 aa9.22□□□□□ -0.93
CASC4-203ENST00000429162 KRTAP12-2P59991 146 aa9.21□□□□□ -0.93
CASC4-203ENST00000429162 UBR4Q5T4S7 5183 aa9.21□□□□□ -0.93
CASC4-203ENST00000429162 SPINT4Q6UDR6 99 aa9.19□□□□□ -0.94
CASC4-203ENST00000429162 ROMO1P60602 79 aa9.18□□□□□ -0.94
CASC4-203ENST00000429162 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
CASC4-203ENST00000429162 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
CASC4-203ENST00000429162 LINC01554Q52M75 96 aa9.12□□□□□ -0.95
CASC4-203ENST00000429162 RNF213Q63HN8 5207 aa9.03□□□□□ -0.96
CASC4-203ENST00000429162 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
CASC4-203ENST00000429162 KRTAP25-1Q3LHN0 102 aa9.01□□□□□ -0.97
CASC4-203ENST00000429162 MT1HP80294 61 aa8.93□□□□□ -0.98
CASC4-203ENST00000429162 M0R2T5 61 aa8.92□□□□□ -0.98
CASC4-203ENST00000429162 FAT4Q6V0I7 4981 aa8.85□□□□□ -0.99
CASC4-203ENST00000429162 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
CASC4-203ENST00000429162 C10orf95Q9H7T3 257 aa8.72□□□□□ -1.01
CASC4-203ENST00000429162 SPRR2GQ9BYE4 73 aa8.71□□□□□ -1.02
CASC4-203ENST00000429162 MT2AP02795 61 aa8.68□□□□□ -1.02
CASC4-203ENST00000429162 MT1FP04733 61 aa8.64□□□□□ -1.03
CASC4-203ENST00000429162 KRTAP9-8Q9BYQ0 159 aa8.64□□□□□ -1.03
CASC4-203ENST00000429162 KRTAP10-10P60014 251 aa8.64□□□□□ -1.03
CASC4-203ENST00000429162 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
CASC4-203ENST00000429162 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
CASC4-203ENST00000429162 KRTAP19-8Q3LI54 63 aa8.41□□□□□ -1.06
CASC4-203ENST00000429162 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
CASC4-203ENST00000429162 TNP1P09430 55 aa8.37□□□□□ -1.07
CASC4-203ENST00000429162 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
CASC4-203ENST00000429162 KRTAP9-3Q9BYQ3 159 aa8.31□□□□□ -1.08
CASC4-203ENST00000429162 MT1BP07438 61 aa8.27□□□□□ -1.09
CASC4-203ENST00000429162 KRTAP23-1A1A580 65 aa8.22□□□□□ -1.09
CASC4-203ENST00000429162 KRTAP10-5P60370 271 aa8.09□□□□□ -1.11
CASC4-203ENST00000429162 MT1XP80297 61 aa8.09□□□□□ -1.11
CASC4-203ENST00000429162 H3BS24 57 aa8.06□□□□□ -1.12
CASC4-203ENST00000429162 KRTAP15-1Q3LI76 137 aa8.06□□□□□ -1.12
CASC4-203ENST00000429162 LCE2BO14633 110 aa8.01□□□□□ -1.13
CASC4-203ENST00000429162 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
CASC4-203ENST00000429162 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
CASC4-203ENST00000429162 KRTAP10-12P60413 245 aa7.84□□□□□ -1.15
CASC4-203ENST00000429162 KRTAP10-7P60409 375 aaPredicted RBP7.8□□□□□ -1.16
CASC4-203ENST00000429162 KRTAP8-1Q8IUC2 63 aa7.78□□□□□ -1.16
CASC4-203ENST00000429162 LCE2DQ5TA82 110 aaPredicted RBP7.76□□□□□ -1.17
CASC4-203ENST00000429162 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
CASC4-203ENST00000429162 NDUFAF8A1L188 74 aa7.7□□□□□ -1.18
CASC4-203ENST00000429162 USH2AO75445 5202 aa7.69□□□□□ -1.18
CASC4-203ENST00000429162 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
CASC4-203ENST00000429162 KRTAP12-3P60328 96 aa7.6□□□□□ -1.19
CASC4-203ENST00000429162 SPRR5A0A1B0GTR4 108 aa7.56□□□□□ -1.2
CASC4-203ENST00000429162 LUZP6Q538Z0 58 aa7.53□□□□□ -1.2
CASC4-203ENST00000429162 SSPOA2VEC9 5147 aa7.45□□□□□ -1.22
CASC4-203ENST00000429162 KRTAP19-6Q3LI70 58 aa7.44□□□□□ -1.22
CASC4-203ENST00000429162 KRTAP19-5Q3LI72 72 aa7.42□□□□□ -1.22
CASC4-203ENST00000429162 CRCT1Q9UGL9 99 aa7.39□□□□□ -1.23
CASC4-203ENST00000429162 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
CASC4-203ENST00000429162 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
CASC4-203ENST00000429162 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
CASC4-203ENST00000429162 KMT2DO14686 5537 aa7.25□□□□□ -1.25
CASC4-203ENST00000429162 KRTAP19-7Q3SYF9 63 aa7.21□□□□□ -1.25
CASC4-203ENST00000429162 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
CASC4-203ENST00000429162 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
CASC4-203ENST00000429162 MT1EP04732 61 aa7.07□□□□□ -1.28
CASC4-203ENST00000429162 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
CASC4-203ENST00000429162 MT1LQ93083 61 aa6.99□□□□□ -1.29
CASC4-203ENST00000429162 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms