RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
SYNGAP1-203ENST00000428982 DNAH17Q9UFH2 4485 aa7.62□□□□□ -1.19
SYNGAP1-203ENST00000428982 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
SYNGAP1-203ENST00000428982 DNAH5Q8TE73 4624 aa7.57□□□□□ -1.2
SYNGAP1-203ENST00000428982 DNAH8Q96JB1 4490 aa7.56□□□□□ -1.2
SYNGAP1-203ENST00000428982 KMT2CQ8NEZ4 4911 aaKnown RBP7.52□□□□□ -1.21
SYNGAP1-203ENST00000428982 PKHD1P08F94 4074 aa7.48□□□□□ -1.21
SYNGAP1-203ENST00000428982 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
SYNGAP1-203ENST00000428982 RYR2Q92736 4967 aa7.43□□□□□ -1.22
SYNGAP1-203ENST00000428982 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
SYNGAP1-203ENST00000428982 RYR3Q15413 4870 aa7.39□□□□□ -1.23
SYNGAP1-203ENST00000428982 KRTAP13-4Q3LI77 160 aa7.38□□□□□ -1.23
SYNGAP1-203ENST00000428982 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
SYNGAP1-203ENST00000428982 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
SYNGAP1-203ENST00000428982 LRP1BQ9NZR2 4599 aa7.31□□□□□ -1.24
SYNGAP1-203ENST00000428982 KRTAP10-6P60371 365 aaPredicted RBP7.29□□□□□ -1.24
SYNGAP1-203ENST00000428982 XP32Q5T750 250 aa7.29□□□□□ -1.24
SYNGAP1-203ENST00000428982 M0QZ58 72 aa7.28□□□□□ -1.24
SYNGAP1-203ENST00000428982 VPS13BQ7Z7G8 4022 aa7.25□□□□□ -1.25
SYNGAP1-203ENST00000428982 KRTAP12-1P59990 96 aa7.24□□□□□ -1.25
SYNGAP1-203ENST00000428982 DYNC1H1Q14204 4646 aaKnown RBP7.22□□□□□ -1.25
SYNGAP1-203ENST00000428982 APOBP04114 4563 aaKnown RBP7.21□□□□□ -1.25
SYNGAP1-203ENST00000428982 R4GN34 69 aa7.2□□□□□ -1.26
SYNGAP1-203ENST00000428982 MT1HL1P0DM35 61 aa7.18□□□□□ -1.26
SYNGAP1-203ENST00000428982 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
SYNGAP1-203ENST00000428982 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
SYNGAP1-203ENST00000428982 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
SYNGAP1-203ENST00000428982 EPPK1P58107 5090 aaKnown RBP7.08□□□□□ -1.28
SYNGAP1-203ENST00000428982 FAT1Q14517 4588 aa7.07□□□□□ -1.28
SYNGAP1-203ENST00000428982 M0R2T5 61 aa7.05□□□□□ -1.28
SYNGAP1-203ENST00000428982 PKHD1L1Q86WI1 4243 aa7.05□□□□□ -1.28
SYNGAP1-203ENST00000428982 HSPG2P98160 4391 aa7.05□□□□□ -1.28
SYNGAP1-203ENST00000428982 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
SYNGAP1-203ENST00000428982 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.29
SYNGAP1-203ENST00000428982 RYR1P21817 5038 aa6.92□□□□□ -1.3
SYNGAP1-203ENST00000428982 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
SYNGAP1-203ENST00000428982 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.31
SYNGAP1-203ENST00000428982 TNXBP22105 4242 aa6.87□□□□□ -1.31
SYNGAP1-203ENST00000428982 LRP1Q07954 4544 aaKnown RBP6.85□□□□□ -1.31
SYNGAP1-203ENST00000428982 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
SYNGAP1-203ENST00000428982 INE1O15225 51 aa6.8□□□□□ -1.32
SYNGAP1-203ENST00000428982 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
SYNGAP1-203ENST00000428982 TNP1P09430 55 aa6.75□□□□□ -1.33
SYNGAP1-203ENST00000428982 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
SYNGAP1-203ENST00000428982 BIRC6Q9NR09 4857 aa6.65□□□□□ -1.35
SYNGAP1-203ENST00000428982 HERC2O95714 4834 aa6.59□□□□□ -1.35
SYNGAP1-203ENST00000428982 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
SYNGAP1-203ENST00000428982 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
SYNGAP1-203ENST00000428982 LPAP08519 4548 aa6.43□□□□□ -1.38
SYNGAP1-203ENST00000428982 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
SYNGAP1-203ENST00000428982 HERC1Q15751 4861 aa6.32□□□□□ -1.4
SYNGAP1-203ENST00000428982 LRP2P98164 4655 aa6.31□□□□□ -1.4
SYNGAP1-203ENST00000428982 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
SYNGAP1-203ENST00000428982 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
SYNGAP1-203ENST00000428982 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
SYNGAP1-203ENST00000428982 HMCN2Q8NDA2 5059 aa6.18□□□□□ -1.42
SYNGAP1-203ENST00000428982 MUC17Q685J3 4493 aa6.15□□□□□ -1.42
SYNGAP1-203ENST00000428982 MUC2Q02817 5179 aa6.1□□□□□ -1.43
SYNGAP1-203ENST00000428982 MT1HP80294 61 aa6.1□□□□□ -1.43
SYNGAP1-203ENST00000428982 UBR4Q5T4S7 5183 aa5.94□□□□□ -1.46
SYNGAP1-203ENST00000428982 MT2AP02795 61 aa5.92□□□□□ -1.46
SYNGAP1-203ENST00000428982 LCE2CQ5TA81 110 aa5.91□□□□□ -1.46
SYNGAP1-203ENST00000428982 LCE3AQ5TA76 89 aa5.9□□□□□ -1.47
SYNGAP1-203ENST00000428982 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
SYNGAP1-203ENST00000428982 FLGP20930 4061 aaPredicted RBP5.87□□□□□ -1.47
SYNGAP1-203ENST00000428982 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
SYNGAP1-203ENST00000428982 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
SYNGAP1-203ENST00000428982 MT1FP04733 61 aa5.84□□□□□ -1.47
SYNGAP1-203ENST00000428982 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
SYNGAP1-203ENST00000428982 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
SYNGAP1-203ENST00000428982 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
SYNGAP1-203ENST00000428982 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
SYNGAP1-203ENST00000428982 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
SYNGAP1-203ENST00000428982 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
SYNGAP1-203ENST00000428982 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
SYNGAP1-203ENST00000428982 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
SYNGAP1-203ENST00000428982 LCE2AQ5TA79 106 aaPredicted RBP5.51□□□□□ -1.53
SYNGAP1-203ENST00000428982 MT1BP07438 61 aa5.45□□□□□ -1.54
SYNGAP1-203ENST00000428982 MT1XP80297 61 aa5.35□□□□□ -1.55
SYNGAP1-203ENST00000428982 LCE2BO14633 110 aa5.34□□□□□ -1.55
SYNGAP1-203ENST00000428982 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
SYNGAP1-203ENST00000428982 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
SYNGAP1-203ENST00000428982 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
SYNGAP1-203ENST00000428982 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
SYNGAP1-203ENST00000428982 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
SYNGAP1-203ENST00000428982 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
SYNGAP1-203ENST00000428982 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
SYNGAP1-203ENST00000428982 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
SYNGAP1-203ENST00000428982 USH2AO75445 5202 aa5.05□□□□□ -1.6
SYNGAP1-203ENST00000428982 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
SYNGAP1-203ENST00000428982 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
SYNGAP1-203ENST00000428982 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
SYNGAP1-203ENST00000428982 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
SYNGAP1-203ENST00000428982 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
SYNGAP1-203ENST00000428982 KRTAP4-8Q9BYQ9 185 aa4.99□□□□□ -1.61
SYNGAP1-203ENST00000428982 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
SYNGAP1-203ENST00000428982 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
SYNGAP1-203ENST00000428982 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
SYNGAP1-203ENST00000428982 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
SYNGAP1-203ENST00000428982 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms