RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 DYNC1H1Q14204 4646 aaKnown RBP4.77□□□□□ -1.65
CDH13-202ENST00000428848 K7ERS5 55 aa4.75□□□□□ -1.65
CDH13-202ENST00000428848 H1FX-AS1Q4G0G2 97 aa4.75□□□□□ -1.65
CDH13-202ENST00000428848 KRTAP3-1Q9BYR8 98 aa4.75□□□□□ -1.65
CDH13-202ENST00000428848 ABCA13Q86UQ4 5058 aa4.75□□□□□ -1.65
CDH13-202ENST00000428848 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
CDH13-202ENST00000428848 KRTAP10-4P60372 401 aaPredicted RBP4.72□□□□□ -1.65
CDH13-202ENST00000428848 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
CDH13-202ENST00000428848 HSPG2P98160 4391 aa4.7□□□□□ -1.66
CDH13-202ENST00000428848 SPINT4Q6UDR6 99 aa4.7□□□□□ -1.66
CDH13-202ENST00000428848 C9orf92A6NGG3 77 aa4.7□□□□□ -1.66
CDH13-202ENST00000428848 FAT1Q14517 4588 aa4.7□□□□□ -1.66
CDH13-202ENST00000428848 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
CDH13-202ENST00000428848 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
CDH13-202ENST00000428848 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
CDH13-202ENST00000428848 Q5VSD8 79 aa4.64□□□□□ -1.67
CDH13-202ENST00000428848 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
CDH13-202ENST00000428848 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
CDH13-202ENST00000428848 FLG2Q5D862 2391 aaPredicted RBP4.62□□□□□ -1.67
CDH13-202ENST00000428848 FAT3Q8TDW7 4589 aa4.62□□□□□ -1.67
CDH13-202ENST00000428848 KRTAP10-8P60410 259 aa4.61□□□□□ -1.67
CDH13-202ENST00000428848 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.67
CDH13-202ENST00000428848 HERC1Q15751 4861 aa4.57□□□□□ -1.68
CDH13-202ENST00000428848 TNXBP22105 4242 aa4.57□□□□□ -1.68
CDH13-202ENST00000428848 DMBT1Q9UGM3 2413 aaPredicted RBP4.57□□□□□ -1.68
CDH13-202ENST00000428848 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
CDH13-202ENST00000428848 KRTAP3-3Q9BYR6 98 aa4.55□□□□□ -1.68
CDH13-202ENST00000428848 LRP1Q07954 4544 aaKnown RBP4.55□□□□□ -1.68
CDH13-202ENST00000428848 KRTAP10-6P60371 365 aaPredicted RBP4.55□□□□□ -1.68
CDH13-202ENST00000428848 MYCBP2O75592 4640 aa4.53□□□□□ -1.68
CDH13-202ENST00000428848 KRTAP3-2Q9BYR7 98 aa4.51□□□□□ -1.69
CDH13-202ENST00000428848 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
CDH13-202ENST00000428848 XP32Q5T750 250 aa4.46□□□□□ -1.7
CDH13-202ENST00000428848 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
CDH13-202ENST00000428848 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
CDH13-202ENST00000428848 S4R3F8 94 aa4.44□□□□□ -1.7
CDH13-202ENST00000428848 A0A0D9SG42 100 aa4.43□□□□□ -1.7
CDH13-202ENST00000428848 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
CDH13-202ENST00000428848 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
CDH13-202ENST00000428848 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
CDH13-202ENST00000428848 UBR4Q5T4S7 5183 aa4.33□□□□□ -1.72
CDH13-202ENST00000428848 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
CDH13-202ENST00000428848 LPAP08519 4548 aa4.3□□□□□ -1.72
CDH13-202ENST00000428848 LRP2P98164 4655 aa4.28□□□□□ -1.72
CDH13-202ENST00000428848 M0QZ58 72 aa4.27□□□□□ -1.73
CDH13-202ENST00000428848 RNF213Q63HN8 5207 aa4.21□□□□□ -1.74
CDH13-202ENST00000428848 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
CDH13-202ENST00000428848 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
CDH13-202ENST00000428848 R4GN34 69 aa4.1□□□□□ -1.75
CDH13-202ENST00000428848 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
CDH13-202ENST00000428848 LORP23490 312 aaPredicted RBP4.09□□□□□ -1.75
CDH13-202ENST00000428848 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
CDH13-202ENST00000428848 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
CDH13-202ENST00000428848 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
CDH13-202ENST00000428848 MUC2Q02817 5179 aa4.03□□□□□ -1.76
CDH13-202ENST00000428848 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
CDH13-202ENST00000428848 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
CDH13-202ENST00000428848 INE1O15225 51 aa3.94□□□□□ -1.78
CDH13-202ENST00000428848 FLGP20930 4061 aaPredicted RBP3.93□□□□□ -1.78
CDH13-202ENST00000428848 FAT4Q6V0I7 4981 aa3.92□□□□□ -1.78
CDH13-202ENST00000428848 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
CDH13-202ENST00000428848 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.78
CDH13-202ENST00000428848 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
CDH13-202ENST00000428848 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
CDH13-202ENST00000428848 M0R2T5 61 aa3.81□□□□□ -1.8
CDH13-202ENST00000428848 TNP1P09430 55 aa3.79□□□□□ -1.8
CDH13-202ENST00000428848 LCE2CQ5TA81 110 aa3.79□□□□□ -1.8
CDH13-202ENST00000428848 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
CDH13-202ENST00000428848 MT1HP80294 61 aa3.72□□□□□ -1.81
CDH13-202ENST00000428848 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
CDH13-202ENST00000428848 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
CDH13-202ENST00000428848 KRTAP10-10P60014 251 aa3.68□□□□□ -1.82
CDH13-202ENST00000428848 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.82
CDH13-202ENST00000428848 MT2AP02795 61 aa3.63□□□□□ -1.83
CDH13-202ENST00000428848 LCE2BO14633 110 aa3.62□□□□□ -1.83
CDH13-202ENST00000428848 MT1FP04733 61 aa3.61□□□□□ -1.83
CDH13-202ENST00000428848 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
CDH13-202ENST00000428848 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
CDH13-202ENST00000428848 KRTAP19-8Q3LI54 63 aa3.58□□□□□ -1.84
CDH13-202ENST00000428848 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
CDH13-202ENST00000428848 MT1BP07438 61 aa3.5□□□□□ -1.85
CDH13-202ENST00000428848 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
CDH13-202ENST00000428848 MT1XP80297 61 aa3.49□□□□□ -1.85
CDH13-202ENST00000428848 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
CDH13-202ENST00000428848 USH2AO75445 5202 aa3.44□□□□□ -1.86
CDH13-202ENST00000428848 SSPOA2VEC9 5147 aa3.43□□□□□ -1.86
CDH13-202ENST00000428848 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
CDH13-202ENST00000428848 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
CDH13-202ENST00000428848 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
CDH13-202ENST00000428848 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
CDH13-202ENST00000428848 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
CDH13-202ENST00000428848 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
CDH13-202ENST00000428848 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
CDH13-202ENST00000428848 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
CDH13-202ENST00000428848 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
CDH13-202ENST00000428848 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
CDH13-202ENST00000428848 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
CDH13-202ENST00000428848 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
CDH13-202ENST00000428848 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
CDH13-202ENST00000428848 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms