RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
HMGCLL1-206ENST00000428842 LCE2AQ5TA79 106 aaPredicted RBP5.05□□□□□ -1.6
HMGCLL1-206ENST00000428842 A8MU10 97 aa5.04□□□□□ -1.6
HMGCLL1-206ENST00000428842 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
HMGCLL1-206ENST00000428842 A8MUU9 505 aa5.03□□□□□ -1.6
HMGCLL1-206ENST00000428842 RPL37P61927 97 aaKnown RBP5.02□□□□□ -1.61
HMGCLL1-206ENST00000428842 ACYP2P14621 99 aa5.01□□□□□ -1.61
HMGCLL1-206ENST00000428842 LCA10Q71F78 164 aa5.01□□□□□ -1.61
HMGCLL1-206ENST00000428842 IGKV2D-30A0A075B6S6 120 aa5.01□□□□□ -1.61
HMGCLL1-206ENST00000428842 IGKV2-30P06310 120 aa5.01□□□□□ -1.61
HMGCLL1-206ENST00000428842 DMAC1Q96GE9 116 aa5.01□□□□□ -1.61
HMGCLL1-206ENST00000428842 A6NED7 52 aa4.99□□□□□ -1.61
HMGCLL1-206ENST00000428842 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
HMGCLL1-206ENST00000428842 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
HMGCLL1-206ENST00000428842 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
HMGCLL1-206ENST00000428842 SPINK7P58062 85 aa4.95□□□□□ -1.62
HMGCLL1-206ENST00000428842 SPTSSBQ8NFR3 76 aa4.92□□□□□ -1.62
HMGCLL1-206ENST00000428842 A6NN06 94 aa4.91□□□□□ -1.62
HMGCLL1-206ENST00000428842 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
HMGCLL1-206ENST00000428842 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
HMGCLL1-206ENST00000428842 A0A1B0GU69 56 aa4.85□□□□□ -1.63
HMGCLL1-206ENST00000428842 SEC61GP60059 68 aa4.85□□□□□ -1.63
HMGCLL1-206ENST00000428842 C7orf65Q6ZTY9 151 aa4.85□□□□□ -1.63
HMGCLL1-206ENST00000428842 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.63
HMGCLL1-206ENST00000428842 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
HMGCLL1-206ENST00000428842 SPATA8Q6RVD6 105 aa4.82□□□□□ -1.64
HMGCLL1-206ENST00000428842 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
HMGCLL1-206ENST00000428842 UQCR11O14957 56 aa4.78□□□□□ -1.64
HMGCLL1-206ENST00000428842 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
HMGCLL1-206ENST00000428842 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
HMGCLL1-206ENST00000428842 COX6B2Q6YFQ2 88 aa4.75□□□□□ -1.65
HMGCLL1-206ENST00000428842 RBM12B-AS1Q9P1G2 102 aa4.74□□□□□ -1.65
HMGCLL1-206ENST00000428842 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
HMGCLL1-206ENST00000428842 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
HMGCLL1-206ENST00000428842 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
HMGCLL1-206ENST00000428842 MT1HP80294 61 aa4.66□□□□□ -1.66
HMGCLL1-206ENST00000428842 H1FX-AS1Q4G0G2 97 aa4.63□□□□□ -1.67
HMGCLL1-206ENST00000428842 ADM2Q7Z4H4 148 aa4.63□□□□□ -1.67
HMGCLL1-206ENST00000428842 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
HMGCLL1-206ENST00000428842 H0YAA0 97 aa4.63□□□□□ -1.67
HMGCLL1-206ENST00000428842 M0R2T5 61 aa4.63□□□□□ -1.67
HMGCLL1-206ENST00000428842 USH2AO75445 5202 aa4.6□□□□□ -1.67
HMGCLL1-206ENST00000428842 S4R3F8 94 aa4.6□□□□□ -1.67
HMGCLL1-206ENST00000428842 A0A1B0GU33 70 aa4.6□□□□□ -1.67
HMGCLL1-206ENST00000428842 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.68
HMGCLL1-206ENST00000428842 CSAG1Q6PB30 78 aa4.51□□□□□ -1.69
HMGCLL1-206ENST00000428842 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
HMGCLL1-206ENST00000428842 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
HMGCLL1-206ENST00000428842 P0C880 135 aa4.47□□□□□ -1.69
HMGCLL1-206ENST00000428842 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
HMGCLL1-206ENST00000428842 MT1FP04733 61 aa4.46□□□□□ -1.7
HMGCLL1-206ENST00000428842 MT2AP02795 61 aa4.44□□□□□ -1.7
HMGCLL1-206ENST00000428842 K7ERS5 55 aa4.43□□□□□ -1.7
HMGCLL1-206ENST00000428842 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
HMGCLL1-206ENST00000428842 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
HMGCLL1-206ENST00000428842 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
HMGCLL1-206ENST00000428842 ROMO1P60602 79 aa4.36□□□□□ -1.71
HMGCLL1-206ENST00000428842 A0A0D9SG42 100 aa4.33□□□□□ -1.72
HMGCLL1-206ENST00000428842 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
HMGCLL1-206ENST00000428842 KRTAP19-1Q8IUB9 90 aa4.29□□□□□ -1.72
HMGCLL1-206ENST00000428842 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
HMGCLL1-206ENST00000428842 CRIPTQ9P021 101 aa4.29□□□□□ -1.72
HMGCLL1-206ENST00000428842 M0QZ58 72 aa4.28□□□□□ -1.72
HMGCLL1-206ENST00000428842 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
HMGCLL1-206ENST00000428842 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
HMGCLL1-206ENST00000428842 R4GN34 69 aa4.26□□□□□ -1.73
HMGCLL1-206ENST00000428842 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
HMGCLL1-206ENST00000428842 KMT2DO14686 5537 aa4.19□□□□□ -1.74
HMGCLL1-206ENST00000428842 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
HMGCLL1-206ENST00000428842 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
HMGCLL1-206ENST00000428842 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
HMGCLL1-206ENST00000428842 MT1BP07438 61 aa4.14□□□□□ -1.75
HMGCLL1-206ENST00000428842 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
HMGCLL1-206ENST00000428842 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
HMGCLL1-206ENST00000428842 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
HMGCLL1-206ENST00000428842 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
HMGCLL1-206ENST00000428842 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
HMGCLL1-206ENST00000428842 PLAC4Q8WY50 150 aa4□□□□□ -1.77
HMGCLL1-206ENST00000428842 MT1XP80297 61 aa3.99□□□□□ -1.77
HMGCLL1-206ENST00000428842 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
HMGCLL1-206ENST00000428842 KRTAP10-5P60370 271 aa3.97□□□□□ -1.77
HMGCLL1-206ENST00000428842 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
HMGCLL1-206ENST00000428842 KRTAP4-8Q9BYQ9 185 aa3.92□□□□□ -1.78
HMGCLL1-206ENST00000428842 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
HMGCLL1-206ENST00000428842 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
HMGCLL1-206ENST00000428842 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
HMGCLL1-206ENST00000428842 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
HMGCLL1-206ENST00000428842 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
HMGCLL1-206ENST00000428842 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
HMGCLL1-206ENST00000428842 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
HMGCLL1-206ENST00000428842 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
HMGCLL1-206ENST00000428842 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
HMGCLL1-206ENST00000428842 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
HMGCLL1-206ENST00000428842 TNP1P09430 55 aa3.78□□□□□ -1.8
HMGCLL1-206ENST00000428842 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
HMGCLL1-206ENST00000428842 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
HMGCLL1-206ENST00000428842 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
HMGCLL1-206ENST00000428842 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
HMGCLL1-206ENST00000428842 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
HMGCLL1-206ENST00000428842 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms