RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
SCAP-206ENST00000428413 S4R3F8 94 aa7.92□□□□□ -1.14
SCAP-206ENST00000428413 ALMS1Q8TCU4 4167 aa7.89□□□□□ -1.15
SCAP-206ENST00000428413 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
SCAP-206ENST00000428413 KIAA1109Q2LD37 5005 aa7.86□□□□□ -1.15
SCAP-206ENST00000428413 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
SCAP-206ENST00000428413 KRTAP10-8P60410 259 aa7.83□□□□□ -1.16
SCAP-206ENST00000428413 XP32Q5T750 250 aa7.82□□□□□ -1.16
SCAP-206ENST00000428413 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
SCAP-206ENST00000428413 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
SCAP-206ENST00000428413 APOBP04114 4563 aaKnown RBP7.82□□□□□ -1.16
SCAP-206ENST00000428413 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
SCAP-206ENST00000428413 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
SCAP-206ENST00000428413 RYR1P21817 5038 aa7.75□□□□□ -1.17
SCAP-206ENST00000428413 KRTAP10-4P60372 401 aaPredicted RBP7.71□□□□□ -1.18
SCAP-206ENST00000428413 TPRXLQ17RH7 258 aa7.7□□□□□ -1.18
SCAP-206ENST00000428413 RYR3Q15413 4870 aa7.67□□□□□ -1.18
SCAP-206ENST00000428413 M0QZ58 72 aa7.67□□□□□ -1.18
SCAP-206ENST00000428413 PKD1P98161 4303 aa7.66□□□□□ -1.18
SCAP-206ENST00000428413 R4GN34 69 aa7.66□□□□□ -1.18
SCAP-206ENST00000428413 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
SCAP-206ENST00000428413 KRTAP15-1Q3LI76 137 aa7.61□□□□□ -1.19
SCAP-206ENST00000428413 RYR2Q92736 4967 aa7.61□□□□□ -1.19
SCAP-206ENST00000428413 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
SCAP-206ENST00000428413 LRP2P98164 4655 aa7.56□□□□□ -1.2
SCAP-206ENST00000428413 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
SCAP-206ENST00000428413 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
SCAP-206ENST00000428413 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
SCAP-206ENST00000428413 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
SCAP-206ENST00000428413 HSPG2P98160 4391 aa7.48□□□□□ -1.21
SCAP-206ENST00000428413 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
SCAP-206ENST00000428413 KRTAP12-2P59991 146 aa7.47□□□□□ -1.21
SCAP-206ENST00000428413 MT1HL1P0DM35 61 aa7.46□□□□□ -1.22
SCAP-206ENST00000428413 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
SCAP-206ENST00000428413 M0R2T5 61 aa7.42□□□□□ -1.22
SCAP-206ENST00000428413 LPAP08519 4548 aa7.41□□□□□ -1.22
SCAP-206ENST00000428413 PKHD1L1Q86WI1 4243 aa7.41□□□□□ -1.22
SCAP-206ENST00000428413 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
SCAP-206ENST00000428413 MUC2Q02817 5179 aa7.27□□□□□ -1.25
SCAP-206ENST00000428413 KRTAP12-1P59990 96 aa7.27□□□□□ -1.25
SCAP-206ENST00000428413 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
SCAP-206ENST00000428413 ABCA13Q86UQ4 5058 aa7.22□□□□□ -1.25
SCAP-206ENST00000428413 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
SCAP-206ENST00000428413 HERC2O95714 4834 aa7.18□□□□□ -1.26
SCAP-206ENST00000428413 BIRC6Q9NR09 4857 aa7.09□□□□□ -1.27
SCAP-206ENST00000428413 KRTAP4-1Q9BYQ7 146 aa7.08□□□□□ -1.28
SCAP-206ENST00000428413 TNXBP22105 4242 aa7.07□□□□□ -1.28
SCAP-206ENST00000428413 RNF213Q63HN8 5207 aa6.96□□□□□ -1.3
SCAP-206ENST00000428413 HERC1Q15751 4861 aa6.94□□□□□ -1.3
SCAP-206ENST00000428413 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
SCAP-206ENST00000428413 PCLOQ9Y6V0 5065 aa6.93□□□□□ -1.3
SCAP-206ENST00000428413 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
SCAP-206ENST00000428413 TNP1P09430 55 aa6.81□□□□□ -1.32
SCAP-206ENST00000428413 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
SCAP-206ENST00000428413 UBR4Q5T4S7 5183 aa6.69□□□□□ -1.34
SCAP-206ENST00000428413 PRO2289Q9P1D8 64 aa6.56□□□□□ -1.36
SCAP-206ENST00000428413 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
SCAP-206ENST00000428413 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
SCAP-206ENST00000428413 MUC17Q685J3 4493 aa6.43□□□□□ -1.38
SCAP-206ENST00000428413 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
SCAP-206ENST00000428413 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
SCAP-206ENST00000428413 MT1HP80294 61 aa6.3□□□□□ -1.4
SCAP-206ENST00000428413 INE1O15225 51 aa6.3□□□□□ -1.4
SCAP-206ENST00000428413 FLGP20930 4061 aaPredicted RBP6.29□□□□□ -1.4
SCAP-206ENST00000428413 MT1FP04733 61 aa6.28□□□□□ -1.4
SCAP-206ENST00000428413 USH2AO75445 5202 aa6.26□□□□□ -1.41
SCAP-206ENST00000428413 MT2AP02795 61 aa6.24□□□□□ -1.41
SCAP-206ENST00000428413 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.41
SCAP-206ENST00000428413 LCE2CQ5TA81 110 aa6.21□□□□□ -1.42
SCAP-206ENST00000428413 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
SCAP-206ENST00000428413 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.43
SCAP-206ENST00000428413 KMT2DO14686 5537 aa6.08□□□□□ -1.44
SCAP-206ENST00000428413 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
SCAP-206ENST00000428413 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
SCAP-206ENST00000428413 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
SCAP-206ENST00000428413 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.45
SCAP-206ENST00000428413 OBSCNQ5VST9 7968 aa5.96□□□□□ -1.46
SCAP-206ENST00000428413 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.46
SCAP-206ENST00000428413 MT1BP07438 61 aa5.88□□□□□ -1.47
SCAP-206ENST00000428413 MT1XP80297 61 aa5.86□□□□□ -1.47
SCAP-206ENST00000428413 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
SCAP-206ENST00000428413 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
SCAP-206ENST00000428413 KRTAP4-8Q9BYQ9 185 aa5.83□□□□□ -1.48
SCAP-206ENST00000428413 DSTQ03001 7570 aaKnown RBP5.83□□□□□ -1.48
SCAP-206ENST00000428413 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
SCAP-206ENST00000428413 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
SCAP-206ENST00000428413 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
SCAP-206ENST00000428413 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
SCAP-206ENST00000428413 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.5
SCAP-206ENST00000428413 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
SCAP-206ENST00000428413 LCE2BO14633 110 aa5.68□□□□□ -1.5
SCAP-206ENST00000428413 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.51
SCAP-206ENST00000428413 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
SCAP-206ENST00000428413 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
SCAP-206ENST00000428413 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.53
SCAP-206ENST00000428413 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
SCAP-206ENST00000428413 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
SCAP-206ENST00000428413 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
SCAP-206ENST00000428413 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
SCAP-206ENST00000428413 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms