RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 KRTAP10-10P60014 251 aa2.94□□□□□ -1.94
C9orf3-205ENST00000427193 IGHV6-1A0A0B4J1U7 121 aa2.93□□□□□ -1.94
C9orf3-205ENST00000427193 PRR4Q16378 134 aa2.93□□□□□ -1.94
C9orf3-205ENST00000427193 PRR15Q8IV56 129 aa2.93□□□□□ -1.94
C9orf3-205ENST00000427193 IMUPQ9GZP8 106 aa2.93□□□□□ -1.94
C9orf3-205ENST00000427193 Q8N9L7 120 aa2.92□□□□□ -1.94
C9orf3-205ENST00000427193 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 IGKV3D-7A0A0C4DH55 119 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 A8MWP4 228 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 NREPQ16612 68 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 TPRXLQ17RH7 258 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 KTN1-AS1Q86SY8 53 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 LINC00643Q86TS7 51 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 UBL5Q9BZL1 73 aa2.91□□□□□ -1.94
C9orf3-205ENST00000427193 FAM236AA0A1B0GUQ0 79 aa2.9□□□□□ -1.95
C9orf3-205ENST00000427193 FAM236BA0A1B0GV22 79 aa2.9□□□□□ -1.95
C9orf3-205ENST00000427193 LINC00313P59037 77 aa2.9□□□□□ -1.95
C9orf3-205ENST00000427193 DEFB116Q30KQ4 102 aa2.9□□□□□ -1.95
C9orf3-205ENST00000427193 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
C9orf3-205ENST00000427193 A8MUN3 132 aa2.89□□□□□ -1.95
C9orf3-205ENST00000427193 K7EQZ3 153 aa2.89□□□□□ -1.95
C9orf3-205ENST00000427193 IGKV4-1P06312 121 aa2.89□□□□□ -1.95
C9orf3-205ENST00000427193 ATP5EP2Q5VTU8 51 aa2.89□□□□□ -1.95
C9orf3-205ENST00000427193 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
C9orf3-205ENST00000427193 USH2AO75445 5202 aa2.88□□□□□ -1.95
C9orf3-205ENST00000427193 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
C9orf3-205ENST00000427193 BPY2O14599 106 aa2.88□□□□□ -1.95
C9orf3-205ENST00000427193 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
C9orf3-205ENST00000427193 MMP24-AS1A0A0U1RRL7 71 aa2.87□□□□□ -1.95
C9orf3-205ENST00000427193 MT-ATP8P03928 68 aa2.87□□□□□ -1.95
C9orf3-205ENST00000427193 C20orf166-AS1Q96NR2 134 aa2.87□□□□□ -1.95
C9orf3-205ENST00000427193 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
C9orf3-205ENST00000427193 A8MUU9 505 aa2.86□□□□□ -1.95
C9orf3-205ENST00000427193 TMEM258P61165 79 aa2.86□□□□□ -1.95
C9orf3-205ENST00000427193 LCA10Q71F78 164 aa2.86□□□□□ -1.95
C9orf3-205ENST00000427193 C8orf17Q9NRJ1 99 aa2.86□□□□□ -1.95
C9orf3-205ENST00000427193 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
C9orf3-205ENST00000427193 NDUFB1O75438 58 aa2.84□□□□□ -1.95
C9orf3-205ENST00000427193 HIST1H4AP62805 103 aaKnown RBP2.84□□□□□ -1.95
C9orf3-205ENST00000427193 TMEM254Q8TBM7 123 aa2.84□□□□□ -1.95
C9orf3-205ENST00000427193 A0A087WVE0 104 aa2.82□□□□□ -1.96
C9orf3-205ENST00000427193 hDV103S1A0JD37 113 aa2.82□□□□□ -1.96
C9orf3-205ENST00000427193 C9orf92A6NGG3 77 aa2.82□□□□□ -1.96
C9orf3-205ENST00000427193 HCG22E2RYF7 251 aa2.82□□□□□ -1.96
C9orf3-205ENST00000427193 RPL37P61927 97 aaKnown RBP2.82□□□□□ -1.96
C9orf3-205ENST00000427193 UQCRQO14949 82 aa2.81□□□□□ -1.96
C9orf3-205ENST00000427193 MRPL34Q9BQ48 92 aaKnown RBP2.81□□□□□ -1.96
C9orf3-205ENST00000427193 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
C9orf3-205ENST00000427193 MT1HP80294 61 aa2.8□□□□□ -1.96
C9orf3-205ENST00000427193 CASC2Q6XLA1 102 aa2.8□□□□□ -1.96
C9orf3-205ENST00000427193 Q5W150 140 aa2.79□□□□□ -1.96
C9orf3-205ENST00000427193 WFDC13Q8IUB5 93 aa2.79□□□□□ -1.96
C9orf3-205ENST00000427193 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
C9orf3-205ENST00000427193 LINC01554Q52M75 96 aa2.78□□□□□ -1.96
C9orf3-205ENST00000427193 SERP1Q9Y6X1 66 aa2.78□□□□□ -1.96
C9orf3-205ENST00000427193 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
C9orf3-205ENST00000427193 ATOX1O00244 68 aa2.77□□□□□ -1.97
C9orf3-205ENST00000427193 COX7CP15954 63 aa2.77□□□□□ -1.97
C9orf3-205ENST00000427193 ZCCHC13Q8WW36 166 aaKnown RBP2.77□□□□□ -1.97
C9orf3-205ENST00000427193 NEBP20929 6669 aa2.76□□□□□ -1.97
C9orf3-205ENST00000427193 PCOTHQ58A44 107 aa2.76□□□□□ -1.97
C9orf3-205ENST00000427193 TP53AIP1Q9HCN2 124 aa2.76□□□□□ -1.97
C9orf3-205ENST00000427193 C7orf65Q6ZTY9 151 aa2.75□□□□□ -1.97
C9orf3-205ENST00000427193 FLGP20930 4061 aaPredicted RBP2.75□□□□□ -1.97
C9orf3-205ENST00000427193 ATP11AUNQ6ZP68 121 aa2.73□□□□□ -1.97
C9orf3-205ENST00000427193 SERP2Q8N6R1 65 aa2.73□□□□□ -1.97
C9orf3-205ENST00000427193 TRAV7A0A075B6U4 112 aa2.72□□□□□ -1.97
C9orf3-205ENST00000427193 HRES1P13985 223 aa2.72□□□□□ -1.97
C9orf3-205ENST00000427193 TRAV22A0A0B4J277 110 aa2.71□□□□□ -1.98
C9orf3-205ENST00000427193 SPINK7P58062 85 aa2.71□□□□□ -1.98
C9orf3-205ENST00000427193 H3BPC8 53 aa2.7□□□□□ -1.98
C9orf3-205ENST00000427193 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
C9orf3-205ENST00000427193 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
C9orf3-205ENST00000427193 CAMK2N1Q7Z7J9 78 aa2.7□□□□□ -1.98
C9orf3-205ENST00000427193 CYP4F30PQ9H0H9 118 aa2.7□□□□□ -1.98
C9orf3-205ENST00000427193 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
C9orf3-205ENST00000427193 LOC101927531A0A1B0GV80 90 aa2.69□□□□□ -1.98
C9orf3-205ENST00000427193 M0R2T5 61 aa2.69□□□□□ -1.98
C9orf3-205ENST00000427193 H0Y9P7 68 aa2.68□□□□□ -1.98
C9orf3-205ENST00000427193 K7ERS5 55 aa2.68□□□□□ -1.98
C9orf3-205ENST00000427193 NDUFC1O43677 76 aa2.68□□□□□ -1.98
C9orf3-205ENST00000427193 KLKP1Q107X0 134 aa2.68□□□□□ -1.98
C9orf3-205ENST00000427193 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
C9orf3-205ENST00000427193 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
C9orf3-205ENST00000427193 ADM2Q7Z4H4 148 aa2.66□□□□□ -1.98
C9orf3-205ENST00000427193 C1orf64Q8NEQ6 169 aa2.66□□□□□ -1.98
C9orf3-205ENST00000427193 LINC00208Q96KT6 92 aa2.66□□□□□ -1.98
C9orf3-205ENST00000427193 A6NN06 94 aa2.65□□□□□ -1.99
C9orf3-205ENST00000427193 CYSTM1Q9H1C7 97 aa2.65□□□□□ -1.99
C9orf3-205ENST00000427193 A6NED7 52 aa2.64□□□□□ -1.99
C9orf3-205ENST00000427193 COX6B2Q6YFQ2 88 aa2.64□□□□□ -1.99
C9orf3-205ENST00000427193 H7BZZ5 65 aa2.63□□□□□ -1.99
C9orf3-205ENST00000427193 C20orf197Q8N268 126 aa2.63□□□□□ -1.99
C9orf3-205ENST00000427193 SNURFQ9Y675 71 aa2.62□□□□□ -1.99
C9orf3-205ENST00000427193 SPANXA2-OT1Q8N9U9 137 aa2.61□□□□□ -1.99
C9orf3-205ENST00000427193 DMAC1Q96GE9 116 aa2.6□□□□□ -1.99
C9orf3-205ENST00000427193 KMT2DO14686 5537 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms