RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
HLA-DQB3-203ENST00000425319 Q8N9L7 120 aa5.42□□□□□ -1.54
HLA-DQB3-203ENST00000425319 UBL5Q9BZL1 73 aa5.42□□□□□ -1.54
HLA-DQB3-203ENST00000425319 TP53AIP1Q9HCN2 124 aa5.42□□□□□ -1.54
HLA-DQB3-203ENST00000425319 LINC00643Q86TS7 51 aa5.41□□□□□ -1.54
HLA-DQB3-203ENST00000425319 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
HLA-DQB3-203ENST00000425319 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
HLA-DQB3-203ENST00000425319 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
HLA-DQB3-203ENST00000425319 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
HLA-DQB3-203ENST00000425319 MT-ATP8P03928 68 aa5.35□□□□□ -1.55
HLA-DQB3-203ENST00000425319 NDUFC1O43677 76 aa5.31□□□□□ -1.56
HLA-DQB3-203ENST00000425319 SPRR2EP22531 72 aa5.3□□□□□ -1.56
HLA-DQB3-203ENST00000425319 SPRR2BP35325 72 aa5.3□□□□□ -1.56
HLA-DQB3-203ENST00000425319 SPRR2AP35326 72 aa5.3□□□□□ -1.56
HLA-DQB3-203ENST00000425319 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
HLA-DQB3-203ENST00000425319 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
HLA-DQB3-203ENST00000425319 HIST1H4AP62805 103 aaKnown RBP5.27□□□□□ -1.57
HLA-DQB3-203ENST00000425319 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
HLA-DQB3-203ENST00000425319 CYP4F30PQ9H0H9 118 aa5.26□□□□□ -1.57
HLA-DQB3-203ENST00000425319 KMT2DO14686 5537 aa5.25□□□□□ -1.57
HLA-DQB3-203ENST00000425319 LOC101927531A0A1B0GV80 90 aa5.25□□□□□ -1.57
HLA-DQB3-203ENST00000425319 A8MUN3 132 aa5.25□□□□□ -1.57
HLA-DQB3-203ENST00000425319 H0YAA0 97 aa5.24□□□□□ -1.57
HLA-DQB3-203ENST00000425319 SCGB1A1P11684 91 aa5.24□□□□□ -1.57
HLA-DQB3-203ENST00000425319 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
HLA-DQB3-203ENST00000425319 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
HLA-DQB3-203ENST00000425319 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
HLA-DQB3-203ENST00000425319 A0A087WVE0 104 aa5.22□□□□□ -1.57
HLA-DQB3-203ENST00000425319 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
HLA-DQB3-203ENST00000425319 KRTAP3-2Q9BYR7 98 aa5.22□□□□□ -1.57
HLA-DQB3-203ENST00000425319 TRAV22A0A0B4J277 110 aa5.2□□□□□ -1.58
HLA-DQB3-203ENST00000425319 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
HLA-DQB3-203ENST00000425319 ATOX1O00244 68 aa5.16□□□□□ -1.58
HLA-DQB3-203ENST00000425319 C20orf197Q8N268 126 aa5.16□□□□□ -1.58
HLA-DQB3-203ENST00000425319 R4GN34 69 aa5.15□□□□□ -1.59
HLA-DQB3-203ENST00000425319 SPRR2DP22532 72 aa5.13□□□□□ -1.59
HLA-DQB3-203ENST00000425319 SMIM20Q8N5G0 67 aa5.13□□□□□ -1.59
HLA-DQB3-203ENST00000425319 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
HLA-DQB3-203ENST00000425319 UQCRQO14949 82 aa5.11□□□□□ -1.59
HLA-DQB3-203ENST00000425319 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
HLA-DQB3-203ENST00000425319 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
HLA-DQB3-203ENST00000425319 TRAV7A0A075B6U4 112 aa5.08□□□□□ -1.6
HLA-DQB3-203ENST00000425319 H0Y9P7 68 aa5.08□□□□□ -1.6
HLA-DQB3-203ENST00000425319 MT1XP80297 61 aa5.08□□□□□ -1.6
HLA-DQB3-203ENST00000425319 SERP2Q8N6R1 65 aa5.08□□□□□ -1.6
HLA-DQB3-203ENST00000425319 OCR1Q9BZK8 76 aa5.08□□□□□ -1.6
HLA-DQB3-203ENST00000425319 PCP4P48539 62 aa5.07□□□□□ -1.6
HLA-DQB3-203ENST00000425319 M0QZ58 72 aa5.05□□□□□ -1.6
HLA-DQB3-203ENST00000425319 COX7CP15954 63 aa5.05□□□□□ -1.6
HLA-DQB3-203ENST00000425319 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
HLA-DQB3-203ENST00000425319 MP68P56378 58 aa5□□□□□ -1.61
HLA-DQB3-203ENST00000425319 LCE3BQ5TA77 95 aa5□□□□□ -1.61
HLA-DQB3-203ENST00000425319 CCDC179H3BU77 68 aa4.99□□□□□ -1.61
HLA-DQB3-203ENST00000425319 LINC00208Q96KT6 92 aa4.99□□□□□ -1.61
HLA-DQB3-203ENST00000425319 H3BPC8 53 aa4.97□□□□□ -1.61
HLA-DQB3-203ENST00000425319 KRTAP4-8A0A0G2JLE6 195 aa4.96□□□□□ -1.62
HLA-DQB3-203ENST00000425319 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
HLA-DQB3-203ENST00000425319 SNURFQ9Y675 71 aa4.94□□□□□ -1.62
HLA-DQB3-203ENST00000425319 P0C880 135 aa4.93□□□□□ -1.62
HLA-DQB3-203ENST00000425319 CYSTM1Q9H1C7 97 aa4.88□□□□□ -1.63
HLA-DQB3-203ENST00000425319 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
HLA-DQB3-203ENST00000425319 H7BZZ5 65 aa4.86□□□□□ -1.63
HLA-DQB3-203ENST00000425319 SPTSSBQ8NFR3 76 aa4.86□□□□□ -1.63
HLA-DQB3-203ENST00000425319 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
HLA-DQB3-203ENST00000425319 TMEM258P61165 79 aa4.84□□□□□ -1.63
HLA-DQB3-203ENST00000425319 ATP5EP56381 51 aaPredicted RBP4.81□□□□□ -1.64
HLA-DQB3-203ENST00000425319 SPANXA2-OT1Q8N9U9 137 aa4.81□□□□□ -1.64
HLA-DQB3-203ENST00000425319 DMAC1Q96GE9 116 aa4.81□□□□□ -1.64
HLA-DQB3-203ENST00000425319 ACYP2P14621 99 aa4.78□□□□□ -1.64
HLA-DQB3-203ENST00000425319 CHKB-CPT1BH3BT56 60 aa4.73□□□□□ -1.65
HLA-DQB3-203ENST00000425319 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
HLA-DQB3-203ENST00000425319 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
HLA-DQB3-203ENST00000425319 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
HLA-DQB3-203ENST00000425319 RPS28P62857 69 aaKnown RBP4.65□□□□□ -1.67
HLA-DQB3-203ENST00000425319 COA5Q86WW8 74 aa4.65□□□□□ -1.67
HLA-DQB3-203ENST00000425319 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.67
HLA-DQB3-203ENST00000425319 GPR98Q8WXG9 6306 aa4.63□□□□□ -1.67
HLA-DQB3-203ENST00000425319 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
HLA-DQB3-203ENST00000425319 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
HLA-DQB3-203ENST00000425319 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
HLA-DQB3-203ENST00000425319 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
HLA-DQB3-203ENST00000425319 MT1EP04732 61 aa4.54□□□□□ -1.68
HLA-DQB3-203ENST00000425319 MT1GP13640 62 aa4.54□□□□□ -1.68
HLA-DQB3-203ENST00000425319 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
HLA-DQB3-203ENST00000425319 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
HLA-DQB3-203ENST00000425319 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
HLA-DQB3-203ENST00000425319 SEC61GP60059 68 aa4.52□□□□□ -1.69
HLA-DQB3-203ENST00000425319 A0A0D9SG42 100 aa4.5□□□□□ -1.69
HLA-DQB3-203ENST00000425319 V9GYY9 64 aa4.49□□□□□ -1.69
HLA-DQB3-203ENST00000425319 MT4P47944 62 aa4.48□□□□□ -1.69
HLA-DQB3-203ENST00000425319 Q1T7F1 81 aa4.47□□□□□ -1.69
HLA-DQB3-203ENST00000425319 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
HLA-DQB3-203ENST00000425319 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
HLA-DQB3-203ENST00000425319 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
HLA-DQB3-203ENST00000425319 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
HLA-DQB3-203ENST00000425319 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
HLA-DQB3-203ENST00000425319 A0A1B0GU69 56 aa4.4□□□□□ -1.71
HLA-DQB3-203ENST00000425319 PSPHP1O15172 72 aa4.38□□□□□ -1.71
HLA-DQB3-203ENST00000425319 MT1MQ8N339 61 aa4.35□□□□□ -1.71
HLA-DQB3-203ENST00000425319 A0A1B0GU33 70 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms