RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ATOX1O00244 68 aa6□□□□□ -1.45
VRK3-203ENST00000424804 LCA10Q71F78 164 aa6□□□□□ -1.45
VRK3-203ENST00000424804 CSAG1Q6PB30 78 aa5.98□□□□□ -1.45
VRK3-203ENST00000424804 LINC00208Q96KT6 92 aa5.97□□□□□ -1.45
VRK3-203ENST00000424804 NEBP20929 6669 aa5.96□□□□□ -1.46
VRK3-203ENST00000424804 MP68P56378 58 aa5.94□□□□□ -1.46
VRK3-203ENST00000424804 MUC12Q9UKN1 5478 aa5.93□□□□□ -1.46
VRK3-203ENST00000424804 SCGB1A1P11684 91 aa5.93□□□□□ -1.46
VRK3-203ENST00000424804 OCR1Q9BZK8 76 aa5.93□□□□□ -1.46
VRK3-203ENST00000424804 MT1BP07438 61 aa5.91□□□□□ -1.46
VRK3-203ENST00000424804 KLKP1Q107X0 134 aa5.9□□□□□ -1.46
VRK3-203ENST00000424804 K7ERU9 68 aa5.87□□□□□ -1.47
VRK3-203ENST00000424804 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
VRK3-203ENST00000424804 NDUFC1O43677 76 aa5.84□□□□□ -1.47
VRK3-203ENST00000424804 MT-ATP8P03928 68 aa5.84□□□□□ -1.47
VRK3-203ENST00000424804 A8MUN3 132 aa5.82□□□□□ -1.48
VRK3-203ENST00000424804 SPRR2GQ9BYE4 73 aa5.82□□□□□ -1.48
VRK3-203ENST00000424804 H3BPC8 53 aa5.81□□□□□ -1.48
VRK3-203ENST00000424804 A6NN06 94 aa5.8□□□□□ -1.48
VRK3-203ENST00000424804 IMUPQ9GZP8 106 aa5.79□□□□□ -1.48
VRK3-203ENST00000424804 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
VRK3-203ENST00000424804 Q5VV11 94 aa5.77□□□□□ -1.49
VRK3-203ENST00000424804 KRTAP5-9P26371 169 aa5.74□□□□□ -1.49
VRK3-203ENST00000424804 KMT2DO14686 5537 aa5.74□□□□□ -1.49
VRK3-203ENST00000424804 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
VRK3-203ENST00000424804 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
VRK3-203ENST00000424804 TRAV7A0A075B6U4 112 aa5.72□□□□□ -1.49
VRK3-203ENST00000424804 SMIM20Q8N5G0 67 aa5.72□□□□□ -1.49
VRK3-203ENST00000424804 DMAC1Q96GE9 116 aa5.71□□□□□ -1.5
VRK3-203ENST00000424804 CRIPTQ9P021 101 aa5.69□□□□□ -1.5
VRK3-203ENST00000424804 H0YAA0 97 aa5.68□□□□□ -1.5
VRK3-203ENST00000424804 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
VRK3-203ENST00000424804 SNURFQ9Y675 71 aa5.65□□□□□ -1.5
VRK3-203ENST00000424804 ACYP2P14621 99 aa5.62□□□□□ -1.51
VRK3-203ENST00000424804 C20orf197Q8N268 126 aa5.59□□□□□ -1.51
VRK3-203ENST00000424804 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
VRK3-203ENST00000424804 P0C880 135 aa5.58□□□□□ -1.52
VRK3-203ENST00000424804 R4GN34 69 aa5.57□□□□□ -1.52
VRK3-203ENST00000424804 SERP2Q8N6R1 65 aa5.56□□□□□ -1.52
VRK3-203ENST00000424804 SPTSSBQ8NFR3 76 aa5.55□□□□□ -1.52
VRK3-203ENST00000424804 M0QZ58 72 aa5.54□□□□□ -1.52
VRK3-203ENST00000424804 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
VRK3-203ENST00000424804 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
VRK3-203ENST00000424804 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
VRK3-203ENST00000424804 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
VRK3-203ENST00000424804 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
VRK3-203ENST00000424804 MT1XP80297 61 aa5.47□□□□□ -1.53
VRK3-203ENST00000424804 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
VRK3-203ENST00000424804 COX7CP15954 63 aa5.42□□□□□ -1.54
VRK3-203ENST00000424804 SPRR2EP22531 72 aa5.41□□□□□ -1.54
VRK3-203ENST00000424804 SPRR2BP35325 72 aa5.41□□□□□ -1.54
VRK3-203ENST00000424804 SPRR2AP35326 72 aa5.41□□□□□ -1.54
VRK3-203ENST00000424804 PRO2289Q9P1D8 64 aa5.41□□□□□ -1.54
VRK3-203ENST00000424804 LCE1AQ5T7P2 110 aa5.39□□□□□ -1.55
VRK3-203ENST00000424804 COA5Q86WW8 74 aa5.38□□□□□ -1.55
VRK3-203ENST00000424804 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
VRK3-203ENST00000424804 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
VRK3-203ENST00000424804 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
VRK3-203ENST00000424804 ANAPC13Q9BS18 74 aa5.32□□□□□ -1.56
VRK3-203ENST00000424804 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
VRK3-203ENST00000424804 CYSTM1Q9H1C7 97 aa5.32□□□□□ -1.56
VRK3-203ENST00000424804 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
VRK3-203ENST00000424804 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
VRK3-203ENST00000424804 H7BZZ5 65 aa5.3□□□□□ -1.56
VRK3-203ENST00000424804 SEC61GP60059 68 aa5.27□□□□□ -1.57
VRK3-203ENST00000424804 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
VRK3-203ENST00000424804 KRTAP13-4Q3LI77 160 aa5.25□□□□□ -1.57
VRK3-203ENST00000424804 SPRR2DP22532 72 aa5.23□□□□□ -1.57
VRK3-203ENST00000424804 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
VRK3-203ENST00000424804 CCDC179H3BU77 68 aa5.21□□□□□ -1.58
VRK3-203ENST00000424804 A0A0D9SG42 100 aa5.19□□□□□ -1.58
VRK3-203ENST00000424804 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
VRK3-203ENST00000424804 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
VRK3-203ENST00000424804 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
VRK3-203ENST00000424804 A0A1B0GU33 70 aa5.15□□□□□ -1.59
VRK3-203ENST00000424804 A0A1B0GU69 56 aa5.12□□□□□ -1.59
VRK3-203ENST00000424804 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
VRK3-203ENST00000424804 SPINT4Q6UDR6 99 aa5.1□□□□□ -1.59
VRK3-203ENST00000424804 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
VRK3-203ENST00000424804 SMIM26A0A096LP01 95 aa5□□□□□ -1.61
VRK3-203ENST00000424804 A8MU10 97 aa4.99□□□□□ -1.61
VRK3-203ENST00000424804 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
VRK3-203ENST00000424804 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
VRK3-203ENST00000424804 TMEM258P61165 79 aa4.98□□□□□ -1.61
VRK3-203ENST00000424804 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
VRK3-203ENST00000424804 GPR98Q8WXG9 6306 aa4.92□□□□□ -1.62
VRK3-203ENST00000424804 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
VRK3-203ENST00000424804 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
VRK3-203ENST00000424804 LINC01558Q9Y6Z2 57 aa4.91□□□□□ -1.62
VRK3-203ENST00000424804 PCP4P48539 62 aa4.89□□□□□ -1.63
VRK3-203ENST00000424804 H3BS24 57 aa4.86□□□□□ -1.63
VRK3-203ENST00000424804 MT1EP04732 61 aa4.86□□□□□ -1.63
VRK3-203ENST00000424804 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
VRK3-203ENST00000424804 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
VRK3-203ENST00000424804 UQCR11O14957 56 aa4.81□□□□□ -1.64
VRK3-203ENST00000424804 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
VRK3-203ENST00000424804 TNP1P09430 55 aa4.75□□□□□ -1.65
VRK3-203ENST00000424804 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
VRK3-203ENST00000424804 PSPHP1O15172 72 aa4.72□□□□□ -1.65
VRK3-203ENST00000424804 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms