RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 C9orf92A6NGG3 77 aa9.06□□□□□ -0.96
CMTM3-202ENST00000424011 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
CMTM3-202ENST00000424011 IGKV2D-30A0A075B6S6 120 aa9.03□□□□□ -0.96
CMTM3-202ENST00000424011 A8MUU9 505 aa9.03□□□□□ -0.96
CMTM3-202ENST00000424011 MT1HL1P0DM35 61 aa9□□□□□ -0.97
CMTM3-202ENST00000424011 HERC2O95714 4834 aa8.98□□□□□ -0.97
CMTM3-202ENST00000424011 ROMO1P60602 79 aa8.94□□□□□ -0.98
CMTM3-202ENST00000424011 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
CMTM3-202ENST00000424011 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
CMTM3-202ENST00000424011 ABCA13Q86UQ4 5058 aa8.91□□□□□ -0.98
CMTM3-202ENST00000424011 RPL37P61927 97 aaKnown RBP8.79□□□□□ -1
CMTM3-202ENST00000424011 XP32Q5T750 250 aa8.77□□□□□ -1.01
CMTM3-202ENST00000424011 H0YAA0 97 aa8.75□□□□□ -1.01
CMTM3-202ENST00000424011 J3QL48 77 aa8.74□□□□□ -1.01
CMTM3-202ENST00000424011 P0C880 135 aa8.7□□□□□ -1.02
CMTM3-202ENST00000424011 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
CMTM3-202ENST00000424011 KRTAP3-1Q9BYR8 98 aa8.68□□□□□ -1.02
CMTM3-202ENST00000424011 PCLOQ9Y6V0 5065 aa8.62□□□□□ -1.03
CMTM3-202ENST00000424011 COX6B2Q6YFQ2 88 aa8.62□□□□□ -1.03
CMTM3-202ENST00000424011 A0A1B0GU33 70 aa8.59□□□□□ -1.03
CMTM3-202ENST00000424011 CRIPTQ9P021 101 aa8.56□□□□□ -1.04
CMTM3-202ENST00000424011 LPAP08519 4548 aa8.54□□□□□ -1.04
CMTM3-202ENST00000424011 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
CMTM3-202ENST00000424011 K7ERS5 55 aa8.5□□□□□ -1.05
CMTM3-202ENST00000424011 LRP2P98164 4655 aa8.49□□□□□ -1.05
CMTM3-202ENST00000424011 HERC1Q15751 4861 aa8.46□□□□□ -1.06
CMTM3-202ENST00000424011 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
CMTM3-202ENST00000424011 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
CMTM3-202ENST00000424011 S4R3F8 94 aa8.34□□□□□ -1.07
CMTM3-202ENST00000424011 HMCN2Q8NDA2 5059 aa8.34□□□□□ -1.07
CMTM3-202ENST00000424011 NDUFAF8A1L188 74 aa8.33□□□□□ -1.08
CMTM3-202ENST00000424011 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
CMTM3-202ENST00000424011 KRTAP15-1Q3LI76 137 aa8.31□□□□□ -1.08
CMTM3-202ENST00000424011 MUC17Q685J3 4493 aa8.23□□□□□ -1.09
CMTM3-202ENST00000424011 KRTAP10-6P60371 365 aaPredicted RBP8.17□□□□□ -1.1
CMTM3-202ENST00000424011 C10orf95Q9H7T3 257 aa8.16□□□□□ -1.1
CMTM3-202ENST00000424011 A0A0A0MQY5 61 aa8.15□□□□□ -1.1
CMTM3-202ENST00000424011 KRTAP4-1Q9BYQ7 146 aa8.14□□□□□ -1.11
CMTM3-202ENST00000424011 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
CMTM3-202ENST00000424011 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
CMTM3-202ENST00000424011 A0A0D9SG42 100 aa8.07□□□□□ -1.12
CMTM3-202ENST00000424011 MUC2Q02817 5179 aa8.06□□□□□ -1.12
CMTM3-202ENST00000424011 UBR4Q5T4S7 5183 aa7.96□□□□□ -1.14
CMTM3-202ENST00000424011 KRTAP19-2Q3LHN2 52 aa7.94□□□□□ -1.14
CMTM3-202ENST00000424011 RNF213Q63HN8 5207 aa7.88□□□□□ -1.15
CMTM3-202ENST00000424011 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
CMTM3-202ENST00000424011 M0QZ58 72 aa7.85□□□□□ -1.15
CMTM3-202ENST00000424011 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
CMTM3-202ENST00000424011 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
CMTM3-202ENST00000424011 FLGP20930 4061 aaPredicted RBP7.77□□□□□ -1.17
CMTM3-202ENST00000424011 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
CMTM3-202ENST00000424011 R4GN34 69 aa7.72□□□□□ -1.17
CMTM3-202ENST00000424011 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.17
CMTM3-202ENST00000424011 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
CMTM3-202ENST00000424011 PLAC4Q8WY50 150 aa7.61□□□□□ -1.19
CMTM3-202ENST00000424011 MT1HP80294 61 aa7.58□□□□□ -1.2
CMTM3-202ENST00000424011 M0R2T5 61 aa7.52□□□□□ -1.21
CMTM3-202ENST00000424011 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
CMTM3-202ENST00000424011 LCE2AQ5TA79 106 aaPredicted RBP7.3□□□□□ -1.24
CMTM3-202ENST00000424011 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
CMTM3-202ENST00000424011 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
CMTM3-202ENST00000424011 MT2AP02795 61 aa7.27□□□□□ -1.25
CMTM3-202ENST00000424011 KRTAP10-10P60014 251 aa7.26□□□□□ -1.25
CMTM3-202ENST00000424011 MT1FP04733 61 aa7.23□□□□□ -1.25
CMTM3-202ENST00000424011 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
CMTM3-202ENST00000424011 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
CMTM3-202ENST00000424011 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
CMTM3-202ENST00000424011 KRTAP19-8Q3LI54 63 aa7.04□□□□□ -1.28
CMTM3-202ENST00000424011 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
CMTM3-202ENST00000424011 TNP1P09430 55 aa6.97□□□□□ -1.29
CMTM3-202ENST00000424011 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
CMTM3-202ENST00000424011 MT1BP07438 61 aa6.9□□□□□ -1.31
CMTM3-202ENST00000424011 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
CMTM3-202ENST00000424011 LCE2BO14633 110 aa6.85□□□□□ -1.31
CMTM3-202ENST00000424011 KRTAP10-5P60370 271 aa6.75□□□□□ -1.33
CMTM3-202ENST00000424011 MT1XP80297 61 aa6.75□□□□□ -1.33
CMTM3-202ENST00000424011 USH2AO75445 5202 aa6.7□□□□□ -1.34
CMTM3-202ENST00000424011 INE1O15225 51 aa6.7□□□□□ -1.34
CMTM3-202ENST00000424011 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
CMTM3-202ENST00000424011 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
CMTM3-202ENST00000424011 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
CMTM3-202ENST00000424011 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
CMTM3-202ENST00000424011 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
CMTM3-202ENST00000424011 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
CMTM3-202ENST00000424011 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
CMTM3-202ENST00000424011 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
CMTM3-202ENST00000424011 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
CMTM3-202ENST00000424011 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
CMTM3-202ENST00000424011 FCGBPQ9Y6R7 5405 aaPredicted RBP6.22□□□□□ -1.41
CMTM3-202ENST00000424011 KMT2DO14686 5537 aa6.18□□□□□ -1.42
CMTM3-202ENST00000424011 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
CMTM3-202ENST00000424011 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.43
CMTM3-202ENST00000424011 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.43
CMTM3-202ENST00000424011 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.43
CMTM3-202ENST00000424011 KRTAP19-7Q3SYF9 63 aa6.01□□□□□ -1.45
CMTM3-202ENST00000424011 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
CMTM3-202ENST00000424011 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
CMTM3-202ENST00000424011 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
CMTM3-202ENST00000424011 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
CMTM3-202ENST00000424011 MT1EP04732 61 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms