RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 LINC00643Q86TS7 51 aa5.24□□□□□ -1.57
USP49-204ENST00000423567 TRAV22A0A0B4J277 110 aa5.22□□□□□ -1.57
USP49-204ENST00000423567 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
USP49-204ENST00000423567 J3QR89 54 aa5.21□□□□□ -1.58
USP49-204ENST00000423567 LOC101927531A0A1B0GV80 90 aa5.2□□□□□ -1.58
USP49-204ENST00000423567 UQCRQO14949 82 aa5.2□□□□□ -1.58
USP49-204ENST00000423567 CYP4F30PQ9H0H9 118 aa5.19□□□□□ -1.58
USP49-204ENST00000423567 S4R3F8 94 aa5.19□□□□□ -1.58
USP49-204ENST00000423567 ATOX1O00244 68 aa5.18□□□□□ -1.58
USP49-204ENST00000423567 A0A087WVE0 104 aa5.17□□□□□ -1.58
USP49-204ENST00000423567 H0Y9P7 68 aa5.16□□□□□ -1.58
USP49-204ENST00000423567 C5orf47Q569G3 176 aa5.16□□□□□ -1.58
USP49-204ENST00000423567 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
USP49-204ENST00000423567 USH2AO75445 5202 aa5.15□□□□□ -1.59
USP49-204ENST00000423567 LCA10Q71F78 164 aa5.12□□□□□ -1.59
USP49-204ENST00000423567 FAM236AA0A1B0GUQ0 79 aa5.11□□□□□ -1.59
USP49-204ENST00000423567 FAM236BA0A1B0GV22 79 aa5.11□□□□□ -1.59
USP49-204ENST00000423567 MP68P56378 58 aa5.11□□□□□ -1.59
USP49-204ENST00000423567 SSPOA2VEC9 5147 aa5.1□□□□□ -1.59
USP49-204ENST00000423567 LINC00208Q96KT6 92 aa5.08□□□□□ -1.6
USP49-204ENST00000423567 SCGB1A1P11684 91 aa5.07□□□□□ -1.6
USP49-204ENST00000423567 OCR1Q9BZK8 76 aa5.07□□□□□ -1.6
USP49-204ENST00000423567 A8MUN3 132 aa5.04□□□□□ -1.6
USP49-204ENST00000423567 H3BPC8 53 aa5.02□□□□□ -1.61
USP49-204ENST00000423567 K7ERU9 68 aa5.02□□□□□ -1.61
USP49-204ENST00000423567 NDUFC1O43677 76 aa5.02□□□□□ -1.61
USP49-204ENST00000423567 KLKP1Q107X0 134 aa5.01□□□□□ -1.61
USP49-204ENST00000423567 IMUPQ9GZP8 106 aa5□□□□□ -1.61
USP49-204ENST00000423567 KRTAP19-6Q3LI70 58 aa4.99□□□□□ -1.61
USP49-204ENST00000423567 MT-ATP8P03928 68 aa4.95□□□□□ -1.62
USP49-204ENST00000423567 FCGBPQ9Y6R7 5405 aaPredicted RBP4.94□□□□□ -1.62
USP49-204ENST00000423567 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
USP49-204ENST00000423567 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
USP49-204ENST00000423567 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
USP49-204ENST00000423567 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
USP49-204ENST00000423567 Q5VV11 94 aa4.92□□□□□ -1.62
USP49-204ENST00000423567 H0YAA0 97 aa4.91□□□□□ -1.62
USP49-204ENST00000423567 DMAC1Q96GE9 116 aa4.9□□□□□ -1.63
USP49-204ENST00000423567 TRAV7A0A075B6U4 112 aa4.89□□□□□ -1.63
USP49-204ENST00000423567 KRTAP19-8Q3LI54 63 aa4.88□□□□□ -1.63
USP49-204ENST00000423567 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
USP49-204ENST00000423567 MT1BP07438 61 aa4.85□□□□□ -1.63
USP49-204ENST00000423567 A6NN06 94 aa4.83□□□□□ -1.64
USP49-204ENST00000423567 ACYP2P14621 99 aa4.83□□□□□ -1.64
USP49-204ENST00000423567 C20orf197Q8N268 126 aa4.83□□□□□ -1.64
USP49-204ENST00000423567 SPTSSBQ8NFR3 76 aa4.79□□□□□ -1.64
USP49-204ENST00000423567 SNURFQ9Y675 71 aa4.78□□□□□ -1.64
USP49-204ENST00000423567 CHKB-CPT1BH3BT56 60 aa4.77□□□□□ -1.65
USP49-204ENST00000423567 SERP2Q8N6R1 65 aa4.77□□□□□ -1.65
USP49-204ENST00000423567 R4GN34 69 aa4.77□□□□□ -1.65
USP49-204ENST00000423567 KRTAP10-5P60370 271 aa4.75□□□□□ -1.65
USP49-204ENST00000423567 P0C880 135 aa4.74□□□□□ -1.65
USP49-204ENST00000423567 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
USP49-204ENST00000423567 M0QZ58 72 aa4.73□□□□□ -1.65
USP49-204ENST00000423567 SPANXA2-OT1Q8N9U9 137 aa4.72□□□□□ -1.65
USP49-204ENST00000423567 PLAC4Q8WY50 150 aa4.72□□□□□ -1.65
USP49-204ENST00000423567 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
USP49-204ENST00000423567 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
USP49-204ENST00000423567 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
USP49-204ENST00000423567 COX7CP15954 63 aa4.63□□□□□ -1.67
USP49-204ENST00000423567 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
USP49-204ENST00000423567 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
USP49-204ENST00000423567 MT1XP80297 61 aa4.58□□□□□ -1.68
USP49-204ENST00000423567 COA5Q86WW8 74 aa4.58□□□□□ -1.68
USP49-204ENST00000423567 ANAPC13Q9BS18 74 aa4.54□□□□□ -1.68
USP49-204ENST00000423567 SEC61GP60059 68 aa4.53□□□□□ -1.68
USP49-204ENST00000423567 H7BZZ5 65 aa4.52□□□□□ -1.69
USP49-204ENST00000423567 SERP1Q9Y6X1 66 aa4.52□□□□□ -1.69
USP49-204ENST00000423567 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
USP49-204ENST00000423567 CYSTM1Q9H1C7 97 aa4.49□□□□□ -1.69
USP49-204ENST00000423567 KRTAP12-2P59991 146 aa4.47□□□□□ -1.69
USP49-204ENST00000423567 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
USP49-204ENST00000423567 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
USP49-204ENST00000423567 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
USP49-204ENST00000423567 MUC12Q9UKN1 5478 aa4.43□□□□□ -1.7
USP49-204ENST00000423567 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
USP49-204ENST00000423567 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
USP49-204ENST00000423567 A0A1B0GU33 70 aa4.4□□□□□ -1.71
USP49-204ENST00000423567 CCDC179H3BU77 68 aa4.4□□□□□ -1.71
USP49-204ENST00000423567 KMT2DO14686 5537 aa4.39□□□□□ -1.71
USP49-204ENST00000423567 A0A0D9SG42 100 aa4.38□□□□□ -1.71
USP49-204ENST00000423567 A0A1B0GU69 56 aa4.38□□□□□ -1.71
USP49-204ENST00000423567 ATP5EP56381 51 aaPredicted RBP4.38□□□□□ -1.71
USP49-204ENST00000423567 NEBP20929 6669 aa4.37□□□□□ -1.71
USP49-204ENST00000423567 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
USP49-204ENST00000423567 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
USP49-204ENST00000423567 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
USP49-204ENST00000423567 SPRR2EP22531 72 aa4.33□□□□□ -1.72
USP49-204ENST00000423567 SPRR2BP35325 72 aa4.33□□□□□ -1.72
USP49-204ENST00000423567 SPRR2AP35326 72 aa4.33□□□□□ -1.72
USP49-204ENST00000423567 SPINT4Q6UDR6 99 aa4.33□□□□□ -1.72
USP49-204ENST00000423567 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
USP49-204ENST00000423567 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
USP49-204ENST00000423567 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
USP49-204ENST00000423567 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
USP49-204ENST00000423567 SMIM26A0A096LP01 95 aa4.3□□□□□ -1.72
USP49-204ENST00000423567 MT3P25713 68 aa4.3□□□□□ -1.72
USP49-204ENST00000423567 TMEM258P61165 79 aa4.28□□□□□ -1.72
USP49-204ENST00000423567 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
USP49-204ENST00000423567 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms