RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 R4GN34 69 aa5.54□□□□□ -1.52
SSPN-202ENST00000422622 RYR3Q15413 4870 aa5.54□□□□□ -1.52
SSPN-202ENST00000422622 APOBP04114 4563 aaKnown RBP5.53□□□□□ -1.52
SSPN-202ENST00000422622 LRP1Q07954 4544 aaKnown RBP5.51□□□□□ -1.53
SSPN-202ENST00000422622 PKD1P98161 4303 aa5.51□□□□□ -1.53
SSPN-202ENST00000422622 KRTAP25-1Q3LHN0 102 aa5.5□□□□□ -1.53
SSPN-202ENST00000422622 MYCBP2O75592 4640 aa5.49□□□□□ -1.53
SSPN-202ENST00000422622 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
SSPN-202ENST00000422622 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
SSPN-202ENST00000422622 KRTAP10-4P60372 401 aaPredicted RBP5.47□□□□□ -1.53
SSPN-202ENST00000422622 RYR1P21817 5038 aa5.47□□□□□ -1.53
SSPN-202ENST00000422622 M0QZ58 72 aa5.47□□□□□ -1.53
SSPN-202ENST00000422622 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
SSPN-202ENST00000422622 FAT3Q8TDW7 4589 aa5.42□□□□□ -1.54
SSPN-202ENST00000422622 RPS29P62273 56 aaKnown RBP5.42□□□□□ -1.54
SSPN-202ENST00000422622 KRTAP10-8P60410 259 aa5.4□□□□□ -1.54
SSPN-202ENST00000422622 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
SSPN-202ENST00000422622 M0R2T5 61 aa5.39□□□□□ -1.55
SSPN-202ENST00000422622 EPPK1P58107 5090 aaKnown RBP5.39□□□□□ -1.55
SSPN-202ENST00000422622 A8MUU9 505 aa5.38□□□□□ -1.55
SSPN-202ENST00000422622 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
SSPN-202ENST00000422622 XP32Q5T750 250 aa5.34□□□□□ -1.56
SSPN-202ENST00000422622 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
SSPN-202ENST00000422622 HSPG2P98160 4391 aa5.33□□□□□ -1.56
SSPN-202ENST00000422622 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
SSPN-202ENST00000422622 H0YAA0 97 aa5.29□□□□□ -1.56
SSPN-202ENST00000422622 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
SSPN-202ENST00000422622 P0C880 135 aa5.22□□□□□ -1.57
SSPN-202ENST00000422622 HERC2O95714 4834 aa5.2□□□□□ -1.58
SSPN-202ENST00000422622 PLAC4Q8WY50 150 aa5.17□□□□□ -1.58
SSPN-202ENST00000422622 LRP2P98164 4655 aa5.16□□□□□ -1.58
SSPN-202ENST00000422622 PKHD1L1Q86WI1 4243 aa5.15□□□□□ -1.58
SSPN-202ENST00000422622 TPRXLQ17RH7 258 aa5.15□□□□□ -1.58
SSPN-202ENST00000422622 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
SSPN-202ENST00000422622 ABCA13Q86UQ4 5058 aa5.12□□□□□ -1.59
SSPN-202ENST00000422622 LPAP08519 4548 aa5.12□□□□□ -1.59
SSPN-202ENST00000422622 TNXBP22105 4242 aa5.06□□□□□ -1.6
SSPN-202ENST00000422622 BIRC6Q9NR09 4857 aa5.02□□□□□ -1.61
SSPN-202ENST00000422622 TNP1P09430 55 aa4.99□□□□□ -1.61
SSPN-202ENST00000422622 HERC1Q15751 4861 aa4.99□□□□□ -1.61
SSPN-202ENST00000422622 MUC2Q02817 5179 aa4.95□□□□□ -1.62
SSPN-202ENST00000422622 KRTAP12-2P59991 146 aa4.92□□□□□ -1.62
SSPN-202ENST00000422622 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.62
SSPN-202ENST00000422622 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.62
SSPN-202ENST00000422622 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
SSPN-202ENST00000422622 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
SSPN-202ENST00000422622 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
SSPN-202ENST00000422622 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
SSPN-202ENST00000422622 RNF213Q63HN8 5207 aa4.83□□□□□ -1.64
SSPN-202ENST00000422622 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
SSPN-202ENST00000422622 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
SSPN-202ENST00000422622 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
SSPN-202ENST00000422622 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
SSPN-202ENST00000422622 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
SSPN-202ENST00000422622 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
SSPN-202ENST00000422622 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
SSPN-202ENST00000422622 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
SSPN-202ENST00000422622 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
SSPN-202ENST00000422622 INE1O15225 51 aa4.57□□□□□ -1.68
SSPN-202ENST00000422622 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
SSPN-202ENST00000422622 MT1HP80294 61 aa4.5□□□□□ -1.69
SSPN-202ENST00000422622 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
SSPN-202ENST00000422622 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
SSPN-202ENST00000422622 FLGP20930 4061 aaPredicted RBP4.43□□□□□ -1.7
SSPN-202ENST00000422622 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
SSPN-202ENST00000422622 MT1FP04733 61 aa4.38□□□□□ -1.71
SSPN-202ENST00000422622 MT2AP02795 61 aa4.37□□□□□ -1.71
SSPN-202ENST00000422622 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
SSPN-202ENST00000422622 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
SSPN-202ENST00000422622 USH2AO75445 5202 aa4.23□□□□□ -1.73
SSPN-202ENST00000422622 SPRR2GQ9BYE4 73 aa4.21□□□□□ -1.74
SSPN-202ENST00000422622 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
SSPN-202ENST00000422622 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.74
SSPN-202ENST00000422622 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
SSPN-202ENST00000422622 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
SSPN-202ENST00000422622 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
SSPN-202ENST00000422622 MT1BP07438 61 aa4.07□□□□□ -1.76
SSPN-202ENST00000422622 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
SSPN-202ENST00000422622 LCE2BO14633 110 aa4.04□□□□□ -1.76
SSPN-202ENST00000422622 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
SSPN-202ENST00000422622 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
SSPN-202ENST00000422622 MT1XP80297 61 aa4□□□□□ -1.77
SSPN-202ENST00000422622 KMT2DO14686 5537 aa3.99□□□□□ -1.77
SSPN-202ENST00000422622 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
SSPN-202ENST00000422622 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
SSPN-202ENST00000422622 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.78
SSPN-202ENST00000422622 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.78
SSPN-202ENST00000422622 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
SSPN-202ENST00000422622 KRTAP19-5Q3LI72 72 aa3.81□□□□□ -1.8
SSPN-202ENST00000422622 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
SSPN-202ENST00000422622 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
SSPN-202ENST00000422622 KRTAP8-1Q8IUC2 63 aa3.77□□□□□ -1.81
SSPN-202ENST00000422622 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
SSPN-202ENST00000422622 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
SSPN-202ENST00000422622 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.82
SSPN-202ENST00000422622 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
SSPN-202ENST00000422622 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
SSPN-202ENST00000422622 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
SSPN-202ENST00000422622 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
SSPN-202ENST00000422622 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms