RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 OCR1Q9BZK8 76 aa8.06□□□□□ -1.12
MSH6-203ENST00000420813 KRTAP6-3Q3LI67 103 aa8.03□□□□□ -1.12
MSH6-203ENST00000420813 CCDC179H3BU77 68 aa8□□□□□ -1.13
MSH6-203ENST00000420813 C4orf26Q17RF5 130 aa8□□□□□ -1.13
MSH6-203ENST00000420813 TP53AIP1Q9HCN2 124 aa7.98□□□□□ -1.13
MSH6-203ENST00000420813 C20orf197Q8N268 126 aa7.94□□□□□ -1.14
MSH6-203ENST00000420813 TRAV22A0A0B4J277 110 aa7.92□□□□□ -1.14
MSH6-203ENST00000420813 MP68P56378 58 aa7.92□□□□□ -1.14
MSH6-203ENST00000420813 C5orf47Q569G3 176 aa7.92□□□□□ -1.14
MSH6-203ENST00000420813 KLKP1Q107X0 134 aa7.91□□□□□ -1.14
MSH6-203ENST00000420813 H0Y9P7 68 aa7.9□□□□□ -1.14
MSH6-203ENST00000420813 H3BPC8 53 aa7.89□□□□□ -1.15
MSH6-203ENST00000420813 KRTAP3-1Q9BYR8 98 aa7.88□□□□□ -1.15
MSH6-203ENST00000420813 S4R3F8 94 aa7.88□□□□□ -1.15
MSH6-203ENST00000420813 NDUFC1O43677 76 aa7.86□□□□□ -1.15
MSH6-203ENST00000420813 CSAG1Q6PB30 78 aa7.86□□□□□ -1.15
MSH6-203ENST00000420813 SNURFQ9Y675 71 aa7.85□□□□□ -1.15
MSH6-203ENST00000420813 A6NN06 94 aa7.84□□□□□ -1.15
MSH6-203ENST00000420813 MT1BP07438 61 aa7.84□□□□□ -1.15
MSH6-203ENST00000420813 C1orf64Q8NEQ6 169 aa7.84□□□□□ -1.15
MSH6-203ENST00000420813 Q5VV11 94 aa7.83□□□□□ -1.16
MSH6-203ENST00000420813 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
MSH6-203ENST00000420813 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
MSH6-203ENST00000420813 LCA10Q71F78 164 aa7.82□□□□□ -1.16
MSH6-203ENST00000420813 CYSTM1Q9H1C7 97 aa7.82□□□□□ -1.16
MSH6-203ENST00000420813 LINC00208Q96KT6 92 aa7.81□□□□□ -1.16
MSH6-203ENST00000420813 TMEM258P61165 79 aa7.8□□□□□ -1.16
MSH6-203ENST00000420813 LOC101927531A0A1B0GV80 90 aa7.78□□□□□ -1.16
MSH6-203ENST00000420813 H7BZZ5 65 aa7.78□□□□□ -1.16
MSH6-203ENST00000420813 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
MSH6-203ENST00000420813 KRTAP10-5P60370 271 aa7.72□□□□□ -1.17
MSH6-203ENST00000420813 NEBP20929 6669 aa7.72□□□□□ -1.17
MSH6-203ENST00000420813 MUC12Q9UKN1 5478 aa7.66□□□□□ -1.18
MSH6-203ENST00000420813 SPANXA2-OT1Q8N9U9 137 aa7.65□□□□□ -1.18
MSH6-203ENST00000420813 CYP4F30PQ9H0H9 118 aa7.65□□□□□ -1.18
MSH6-203ENST00000420813 CRIPTQ9P021 101 aa7.64□□□□□ -1.19
MSH6-203ENST00000420813 KRTAP5-9P26371 169 aa7.59□□□□□ -1.19
MSH6-203ENST00000420813 SERP1Q9Y6X1 66 aa7.53□□□□□ -1.2
MSH6-203ENST00000420813 KRTAP20-1Q3LI63 56 aa7.52□□□□□ -1.21
MSH6-203ENST00000420813 H0YAA0 97 aa7.5□□□□□ -1.21
MSH6-203ENST00000420813 KMT2DO14686 5537 aa7.48□□□□□ -1.21
MSH6-203ENST00000420813 DMAC1Q96GE9 116 aa7.47□□□□□ -1.21
MSH6-203ENST00000420813 RPS28P62857 69 aaKnown RBP7.46□□□□□ -1.22
MSH6-203ENST00000420813 A8MUN3 132 aa7.43□□□□□ -1.22
MSH6-203ENST00000420813 MDN1Q9NU22 5596 aa7.41□□□□□ -1.22
MSH6-203ENST00000420813 COA5Q86WW8 74 aa7.4□□□□□ -1.22
MSH6-203ENST00000420813 ACYP2P14621 99 aa7.39□□□□□ -1.23
MSH6-203ENST00000420813 ADM2Q7Z4H4 148 aa7.37□□□□□ -1.23
MSH6-203ENST00000420813 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
MSH6-203ENST00000420813 SMIM26A0A096LP01 95 aa7.32□□□□□ -1.24
MSH6-203ENST00000420813 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
MSH6-203ENST00000420813 MT1XP80297 61 aa7.3□□□□□ -1.24
MSH6-203ENST00000420813 KRTAP2-3P0C7H8 128 aa7.28□□□□□ -1.24
MSH6-203ENST00000420813 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
MSH6-203ENST00000420813 KRTAP2-4Q9BYR9 128 aa7.28□□□□□ -1.24
MSH6-203ENST00000420813 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
MSH6-203ENST00000420813 SPRR2EP22531 72 aa7.23□□□□□ -1.25
MSH6-203ENST00000420813 SPRR2BP35325 72 aa7.23□□□□□ -1.25
MSH6-203ENST00000420813 SPRR2AP35326 72 aa7.23□□□□□ -1.25
MSH6-203ENST00000420813 R4GN34 69 aa7.22□□□□□ -1.25
MSH6-203ENST00000420813 SPTSSBQ8NFR3 76 aa7.21□□□□□ -1.26
MSH6-203ENST00000420813 KRTAP12-2P59991 146 aa7.2□□□□□ -1.26
MSH6-203ENST00000420813 KRTAP8-1Q8IUC2 63 aa7.2□□□□□ -1.26
MSH6-203ENST00000420813 V9GYY9 64 aa7.2□□□□□ -1.26
MSH6-203ENST00000420813 P0C880 135 aa7.17□□□□□ -1.26
MSH6-203ENST00000420813 Q1T7F1 81 aa7.16□□□□□ -1.26
MSH6-203ENST00000420813 M0QZ58 72 aa7.14□□□□□ -1.27
MSH6-203ENST00000420813 LCE1AQ5T7P2 110 aa7.12□□□□□ -1.27
MSH6-203ENST00000420813 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
MSH6-203ENST00000420813 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
MSH6-203ENST00000420813 KRTAP2-2Q9BYT5 123 aa7.04□□□□□ -1.28
MSH6-203ENST00000420813 KRTAP2-1Q9BYU5 128 aa7.04□□□□□ -1.28
MSH6-203ENST00000420813 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
MSH6-203ENST00000420813 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
MSH6-203ENST00000420813 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
MSH6-203ENST00000420813 A0A1B0GU69 56 aa7.01□□□□□ -1.29
MSH6-203ENST00000420813 PSPHP1O15172 72 aa7.01□□□□□ -1.29
MSH6-203ENST00000420813 SPRR2DP22532 72 aa6.99□□□□□ -1.29
MSH6-203ENST00000420813 SEC61GP60059 68 aa6.98□□□□□ -1.29
MSH6-203ENST00000420813 KRTAP10-12P60413 245 aa6.95□□□□□ -1.3
MSH6-203ENST00000420813 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
MSH6-203ENST00000420813 A6NED7 52 aa6.84□□□□□ -1.31
MSH6-203ENST00000420813 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
MSH6-203ENST00000420813 UQCR11O14957 56 aa6.79□□□□□ -1.32
MSH6-203ENST00000420813 A0A1B0GU33 70 aa6.76□□□□□ -1.33
MSH6-203ENST00000420813 BRK1Q8WUW1 75 aa6.76□□□□□ -1.33
MSH6-203ENST00000420813 CDC42SE1Q9NRR8 79 aa6.73□□□□□ -1.33
MSH6-203ENST00000420813 MIR22HGQ0VDD5 57 aa6.71□□□□□ -1.34
MSH6-203ENST00000420813 SPATA8Q6RVD6 105 aa6.67□□□□□ -1.34
MSH6-203ENST00000420813 PRO0628Q9UI54 55 aa6.63□□□□□ -1.35
MSH6-203ENST00000420813 KRTAP13-4Q3LI77 160 aa6.61□□□□□ -1.35
MSH6-203ENST00000420813 CAMK2N1Q7Z7J9 78 aa6.6□□□□□ -1.35
MSH6-203ENST00000420813 A8MU10 97 aa6.58□□□□□ -1.36
MSH6-203ENST00000420813 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
MSH6-203ENST00000420813 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
MSH6-203ENST00000420813 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
MSH6-203ENST00000420813 MT1EP04732 61 aa6.49□□□□□ -1.37
MSH6-203ENST00000420813 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
MSH6-203ENST00000420813 A0A0D9SG42 100 aa6.48□□□□□ -1.37
MSH6-203ENST00000420813 K7ERS5 55 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms