RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 A0A087WVE0 104 aa4.44□□□□□ -1.7
NUP50-205ENST00000419387 C7orf65Q6ZTY9 151 aa4.44□□□□□ -1.7
NUP50-205ENST00000419387 J3QR89 54 aa4.41□□□□□ -1.7
NUP50-205ENST00000419387 HIST1H4AP62805 103 aaKnown RBP4.41□□□□□ -1.7
NUP50-205ENST00000419387 TP53AIP1Q9HCN2 124 aa4.41□□□□□ -1.7
NUP50-205ENST00000419387 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.71
NUP50-205ENST00000419387 C4orf26Q17RF5 130 aa4.39□□□□□ -1.71
NUP50-205ENST00000419387 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
NUP50-205ENST00000419387 OCR1Q9BZK8 76 aa4.37□□□□□ -1.71
NUP50-205ENST00000419387 K7ERU9 68 aa4.36□□□□□ -1.71
NUP50-205ENST00000419387 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
NUP50-205ENST00000419387 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
NUP50-205ENST00000419387 CYP4F30PQ9H0H9 118 aa4.35□□□□□ -1.71
NUP50-205ENST00000419387 TRAV22A0A0B4J277 110 aa4.33□□□□□ -1.72
NUP50-205ENST00000419387 UQCRQO14949 82 aa4.33□□□□□ -1.72
NUP50-205ENST00000419387 C5orf47Q569G3 176 aa4.33□□□□□ -1.72
NUP50-205ENST00000419387 IMUPQ9GZP8 106 aa4.32□□□□□ -1.72
NUP50-205ENST00000419387 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
NUP50-205ENST00000419387 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
NUP50-205ENST00000419387 S4R3F8 94 aa4.31□□□□□ -1.72
NUP50-205ENST00000419387 FAM236AA0A1B0GUQ0 79 aa4.3□□□□□ -1.72
NUP50-205ENST00000419387 FAM236BA0A1B0GV22 79 aa4.3□□□□□ -1.72
NUP50-205ENST00000419387 H0Y9P7 68 aa4.29□□□□□ -1.72
NUP50-205ENST00000419387 CSAG1Q6PB30 78 aa4.29□□□□□ -1.72
NUP50-205ENST00000419387 LOC101927531A0A1B0GV80 90 aa4.28□□□□□ -1.72
NUP50-205ENST00000419387 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
NUP50-205ENST00000419387 LCA10Q71F78 164 aa4.27□□□□□ -1.73
NUP50-205ENST00000419387 ATOX1O00244 68 aa4.25□□□□□ -1.73
NUP50-205ENST00000419387 MT1BP07438 61 aa4.25□□□□□ -1.73
NUP50-205ENST00000419387 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
NUP50-205ENST00000419387 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
NUP50-205ENST00000419387 A6NN06 94 aa4.24□□□□□ -1.73
NUP50-205ENST00000419387 Q5VV11 94 aa4.24□□□□□ -1.73
NUP50-205ENST00000419387 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
NUP50-205ENST00000419387 SCGB1A1P11684 91 aa4.21□□□□□ -1.74
NUP50-205ENST00000419387 TRAV7A0A075B6U4 112 aa4.2□□□□□ -1.74
NUP50-205ENST00000419387 H3BPC8 53 aa4.2□□□□□ -1.74
NUP50-205ENST00000419387 MP68P56378 58 aa4.19□□□□□ -1.74
NUP50-205ENST00000419387 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
NUP50-205ENST00000419387 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
NUP50-205ENST00000419387 SMIM20Q8N5G0 67 aa4.16□□□□□ -1.74
NUP50-205ENST00000419387 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
NUP50-205ENST00000419387 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
NUP50-205ENST00000419387 NEBP20929 6669 aa4.13□□□□□ -1.75
NUP50-205ENST00000419387 A8MUN3 132 aa4.12□□□□□ -1.75
NUP50-205ENST00000419387 SERP2Q8N6R1 65 aa4.12□□□□□ -1.75
NUP50-205ENST00000419387 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
NUP50-205ENST00000419387 DMAC1Q96GE9 116 aa4.11□□□□□ -1.75
NUP50-205ENST00000419387 NDUFC1O43677 76 aa4.1□□□□□ -1.75
NUP50-205ENST00000419387 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
NUP50-205ENST00000419387 SNURFQ9Y675 71 aa4.1□□□□□ -1.75
NUP50-205ENST00000419387 H0YAA0 97 aa4.09□□□□□ -1.75
NUP50-205ENST00000419387 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
NUP50-205ENST00000419387 C20orf197Q8N268 126 aa4.07□□□□□ -1.76
NUP50-205ENST00000419387 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
NUP50-205ENST00000419387 COX7CP15954 63 aa4.04□□□□□ -1.76
NUP50-205ENST00000419387 KRTAP20-1Q3LI63 56 aa4.04□□□□□ -1.76
NUP50-205ENST00000419387 ADM2Q7Z4H4 148 aa4.04□□□□□ -1.76
NUP50-205ENST00000419387 CYSTM1Q9H1C7 97 aa4.04□□□□□ -1.76
NUP50-205ENST00000419387 MDN1Q9NU22 5596 aa4.03□□□□□ -1.76
NUP50-205ENST00000419387 KMT2DO14686 5537 aa4.03□□□□□ -1.76
NUP50-205ENST00000419387 ACYP2P14621 99 aa4.01□□□□□ -1.77
NUP50-205ENST00000419387 SPANXA2-OT1Q8N9U9 137 aa4.01□□□□□ -1.77
NUP50-205ENST00000419387 H7BZZ5 65 aa3.98□□□□□ -1.77
NUP50-205ENST00000419387 PRO2289Q9P1D8 64 aa3.98□□□□□ -1.77
NUP50-205ENST00000419387 P0C880 135 aa3.97□□□□□ -1.77
NUP50-205ENST00000419387 PLAC4Q8WY50 150 aa3.97□□□□□ -1.77
NUP50-205ENST00000419387 MT1XP80297 61 aa3.96□□□□□ -1.78
NUP50-205ENST00000419387 R4GN34 69 aa3.95□□□□□ -1.78
NUP50-205ENST00000419387 ANAPC13Q9BS18 74 aa3.94□□□□□ -1.78
NUP50-205ENST00000419387 CCDC179H3BU77 68 aa3.93□□□□□ -1.78
NUP50-205ENST00000419387 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
NUP50-205ENST00000419387 M0QZ58 72 aa3.9□□□□□ -1.79
NUP50-205ENST00000419387 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.79
NUP50-205ENST00000419387 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.79
NUP50-205ENST00000419387 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
NUP50-205ENST00000419387 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
NUP50-205ENST00000419387 SPRR2EP22531 72 aa3.88□□□□□ -1.79
NUP50-205ENST00000419387 SPRR2BP35325 72 aa3.88□□□□□ -1.79
NUP50-205ENST00000419387 SPRR2AP35326 72 aa3.88□□□□□ -1.79
NUP50-205ENST00000419387 COA5Q86WW8 74 aa3.88□□□□□ -1.79
NUP50-205ENST00000419387 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
NUP50-205ENST00000419387 CHKB-CPT1BH3BT56 60 aa3.86□□□□□ -1.79
NUP50-205ENST00000419387 LINC01554Q52M75 96 aa3.85□□□□□ -1.79
NUP50-205ENST00000419387 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
NUP50-205ENST00000419387 SPTSSBQ8NFR3 76 aa3.85□□□□□ -1.79
NUP50-205ENST00000419387 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
NUP50-205ENST00000419387 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
NUP50-205ENST00000419387 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
NUP50-205ENST00000419387 SPRR2DP22532 72 aa3.76□□□□□ -1.81
NUP50-205ENST00000419387 ATP5EP56381 51 aaPredicted RBP3.73□□□□□ -1.81
NUP50-205ENST00000419387 TMEM258P61165 79 aa3.72□□□□□ -1.81
NUP50-205ENST00000419387 A0A1B0GU33 70 aa3.67□□□□□ -1.82
NUP50-205ENST00000419387 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
NUP50-205ENST00000419387 SERP1Q9Y6X1 66 aa3.67□□□□□ -1.82
NUP50-205ENST00000419387 SEC61GP60059 68 aa3.66□□□□□ -1.82
NUP50-205ENST00000419387 LINC01558Q9Y6Z2 57 aa3.65□□□□□ -1.83
NUP50-205ENST00000419387 A0A1B0GU69 56 aa3.64□□□□□ -1.83
NUP50-205ENST00000419387 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
NUP50-205ENST00000419387 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms