RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 MYCBP2O75592 4640 aa13.76□□□□□ -0.21
FOXA2-202ENST00000419308 KIAA1109Q2LD37 5005 aa13.74□□□□□ -0.21
FOXA2-202ENST00000419308 A0A1B0GU33 70 aa13.73□□□□□ -0.21
FOXA2-202ENST00000419308 MT1HL1P0DM35 61 aa13.72□□□□□ -0.21
FOXA2-202ENST00000419308 H1FX-AS1Q4G0G2 97 aa13.69□□□□□ -0.22
FOXA2-202ENST00000419308 ADM2Q7Z4H4 148 aa13.68□□□□□ -0.22
FOXA2-202ENST00000419308 PRAC1Q96KF2 57 aa13.65□□□□□ -0.22
FOXA2-202ENST00000419308 KRTAP3-3Q9BYR6 98 aa13.59□□□□□ -0.23
FOXA2-202ENST00000419308 S4R3F8 94 aa13.46□□□□□ -0.25
FOXA2-202ENST00000419308 EPPK1P58107 5090 aaKnown RBP13.45□□□□□ -0.26
FOXA2-202ENST00000419308 KRTAP10-6P60371 365 aaPredicted RBP13.42□□□□□ -0.26
FOXA2-202ENST00000419308 TPRXLQ17RH7 258 aa13.37□□□□□ -0.27
FOXA2-202ENST00000419308 KRTAP3-2Q9BYR7 98 aa13.34□□□□□ -0.27
FOXA2-202ENST00000419308 LPAP08519 4548 aa13.33□□□□□ -0.28
FOXA2-202ENST00000419308 LRP2P98164 4655 aa13.33□□□□□ -0.28
FOXA2-202ENST00000419308 CSAG1Q6PB30 78 aa13.29□□□□□ -0.28
FOXA2-202ENST00000419308 KRTAP13-4Q3LI77 160 aa13.24□□□□□ -0.29
FOXA2-202ENST00000419308 K7ERS5 55 aa13.21□□□□□ -0.29
FOXA2-202ENST00000419308 KRTAP4-5Q9BYR2 181 aa13.21□□□□□ -0.29
FOXA2-202ENST00000419308 ABCA13Q86UQ4 5058 aa13.19□□□□□ -0.3
FOXA2-202ENST00000419308 P0C880 135 aa13.18□□□□□ -0.3
FOXA2-202ENST00000419308 LINC01554Q52M75 96 aa13.13□□□□□ -0.31
FOXA2-202ENST00000419308 A0A0D9SG42 100 aa13.09□□□□□ -0.31
FOXA2-202ENST00000419308 KRTAP25-1Q3LHN0 102 aa12.97□□□□□ -0.33
FOXA2-202ENST00000419308 ROMO1P60602 79 aa12.9□□□□□ -0.34
FOXA2-202ENST00000419308 SEC61BP60468 96 aaKnown RBP12.84□□□□□ -0.35
FOXA2-202ENST00000419308 CRIPTQ9P021 101 aa12.83□□□□□ -0.35
FOXA2-202ENST00000419308 KRTAP12-2P59991 146 aa12.79□□□□□ -0.36
FOXA2-202ENST00000419308 MUC17Q685J3 4493 aa12.77□□□□□ -0.37
FOXA2-202ENST00000419308 J3QL48 77 aa12.76□□□□□ -0.37
FOXA2-202ENST00000419308 M0QZ58 72 aa12.75□□□□□ -0.37
FOXA2-202ENST00000419308 KRTAP12-1P59990 96 aa12.72□□□□□ -0.37
FOXA2-202ENST00000419308 HERC2O95714 4834 aa12.71□□□□□ -0.37
FOXA2-202ENST00000419308 KRTAP4-1Q9BYQ7 146 aa12.7□□□□□ -0.38
FOXA2-202ENST00000419308 SPINT4Q6UDR6 99 aa12.67□□□□□ -0.38
FOXA2-202ENST00000419308 KRTAP19-2Q3LHN2 52 aa12.49□□□□□ -0.41
FOXA2-202ENST00000419308 R4GN34 69 aa12.48□□□□□ -0.41
FOXA2-202ENST00000419308 C10orf95Q9H7T3 257 aa12.43□□□□□ -0.42
FOXA2-202ENST00000419308 LORP23490 312 aaPredicted RBP12.39□□□□□ -0.43
FOXA2-202ENST00000419308 BIRC6Q9NR09 4857 aa12.38□□□□□ -0.43
FOXA2-202ENST00000419308 H3BS24 57 aa12.33□□□□□ -0.44
FOXA2-202ENST00000419308 MUC2Q02817 5179 aa12.29□□□□□ -0.44
FOXA2-202ENST00000419308 FLGP20930 4061 aaPredicted RBP12.15□□□□□ -0.46
FOXA2-202ENST00000419308 HERC1Q15751 4861 aa12.1□□□□□ -0.47
FOXA2-202ENST00000419308 PCLOQ9Y6V0 5065 aa12.05□□□□□ -0.48
FOXA2-202ENST00000419308 HMCN2Q8NDA2 5059 aa12.02□□□□□ -0.48
FOXA2-202ENST00000419308 CAMK2N1Q7Z7J9 78 aa11.81□□□□□ -0.52
FOXA2-202ENST00000419308 LCE2CQ5TA81 110 aa11.79□□□□□ -0.52
FOXA2-202ENST00000419308 KRTAP15-1Q3LI76 137 aa11.78□□□□□ -0.52
FOXA2-202ENST00000419308 FAT4Q6V0I7 4981 aa11.69□□□□□ -0.54
FOXA2-202ENST00000419308 RNF213Q63HN8 5207 aa11.5□□□□□ -0.57
FOXA2-202ENST00000419308 PP632Q6XCG6 107 aa11.5□□□□□ -0.57
FOXA2-202ENST00000419308 UBR4Q5T4S7 5183 aa11.49□□□□□ -0.57
FOXA2-202ENST00000419308 MT1HP80294 61 aa11.47□□□□□ -0.57
FOXA2-202ENST00000419308 M0R2T5 61 aa11.47□□□□□ -0.57
FOXA2-202ENST00000419308 SPRR2GQ9BYE4 73 aa11.46□□□□□ -0.57
FOXA2-202ENST00000419308 KRTAP19-1Q8IUB9 90 aa11.41□□□□□ -0.58
FOXA2-202ENST00000419308 PLAC4Q8WY50 150 aa11.39□□□□□ -0.59
FOXA2-202ENST00000419308 NDUFAF8A1L188 74 aa11.38□□□□□ -0.59
FOXA2-202ENST00000419308 TNP1P09430 55 aa11.36□□□□□ -0.59
FOXA2-202ENST00000419308 MT2AP02795 61 aa11.26□□□□□ -0.61
FOXA2-202ENST00000419308 MT1FP04733 61 aa11.25□□□□□ -0.61
FOXA2-202ENST00000419308 KRTAP10-10P60014 251 aa11.21□□□□□ -0.61
FOXA2-202ENST00000419308 KRTAP9-8Q9BYQ0 159 aa11.2□□□□□ -0.62
FOXA2-202ENST00000419308 KRTAP23-1A1A580 65 aa11.19□□□□□ -0.62
FOXA2-202ENST00000419308 KRTAP19-8Q3LI54 63 aa10.98□□□□□ -0.65
FOXA2-202ENST00000419308 MT1BP07438 61 aa10.85□□□□□ -0.67
FOXA2-202ENST00000419308 LCE3AQ5TA76 89 aa10.79□□□□□ -0.68
FOXA2-202ENST00000419308 LUZP6Q538Z0 58 aa10.77□□□□□ -0.68
FOXA2-202ENST00000419308 KRTAP10-5P60370 271 aa10.74□□□□□ -0.69
FOXA2-202ENST00000419308 KRTAP9-3Q9BYQ3 159 aa10.74□□□□□ -0.69
FOXA2-202ENST00000419308 MT1XP80297 61 aa10.72□□□□□ -0.69
FOXA2-202ENST00000419308 SPRR5A0A1B0GTR4 108 aa10.67□□□□□ -0.7
FOXA2-202ENST00000419308 KRTAP8-1Q8IUC2 63 aa10.55□□□□□ -0.72
FOXA2-202ENST00000419308 KRTAP10-12P60413 245 aa10.44□□□□□ -0.74
FOXA2-202ENST00000419308 KRTAP10-7P60409 375 aaPredicted RBP10.4□□□□□ -0.74
FOXA2-202ENST00000419308 PRO2289Q9P1D8 64 aa10.34□□□□□ -0.75
FOXA2-202ENST00000419308 LCE2BO14633 110 aa10.33□□□□□ -0.76
FOXA2-202ENST00000419308 KRTAP12-3P60328 96 aa10.29□□□□□ -0.76
FOXA2-202ENST00000419308 LCE2AQ5TA79 106 aaPredicted RBP10.28□□□□□ -0.76
FOXA2-202ENST00000419308 USH2AO75445 5202 aa10.12□□□□□ -0.79
FOXA2-202ENST00000419308 A0A0A0MQY5 61 aa10.06□□□□□ -0.8
FOXA2-202ENST00000419308 KRTAP19-5Q3LI72 72 aa9.93□□□□□ -0.82
FOXA2-202ENST00000419308 KMT2DO14686 5537 aa9.86□□□□□ -0.83
FOXA2-202ENST00000419308 KRTAP4-8A0A0G2JLE6 195 aa9.8□□□□□ -0.84
FOXA2-202ENST00000419308 KRTAP4-8Q9BYQ9 185 aa9.8□□□□□ -0.84
FOXA2-202ENST00000419308 LCE3CQ5T5A8 94 aa9.68□□□□□ -0.86
FOXA2-202ENST00000419308 KRTAP19-7Q3SYF9 63 aa9.56□□□□□ -0.88
FOXA2-202ENST00000419308 SSPOA2VEC9 5147 aa9.53□□□□□ -0.88
FOXA2-202ENST00000419308 KRTAP9-6A8MVA2 160 aa9.33□□□□□ -0.92
FOXA2-202ENST00000419308 KRTAP19-6Q3LI70 58 aa9.33□□□□□ -0.92
FOXA2-202ENST00000419308 MT1EP04732 61 aa9.3□□□□□ -0.92
FOXA2-202ENST00000419308 KRTAP4-7Q9BYR0 210 aa9.29□□□□□ -0.92
FOXA2-202ENST00000419308 MT1LQ93083 61 aa9.26□□□□□ -0.93
FOXA2-202ENST00000419308 KRTAP19-4Q3LI73 84 aa9.23□□□□□ -0.93
FOXA2-202ENST00000419308 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.93
FOXA2-202ENST00000419308 INE1O15225 51 aa9.18□□□□□ -0.94
FOXA2-202ENST00000419308 KRTAP2-3P0C7H8 128 aa8.93□□□□□ -0.98
FOXA2-202ENST00000419308 KRTAP2-4Q9BYR9 128 aa8.93□□□□□ -0.98
FOXA2-202ENST00000419308 KRTAP2-1Q9BYU5 128 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms