RNA–Protein interactions for RNA: ENST00000419255.6

SEMA3C-203, Transcript of semaphorin 3C, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEMA3C, Length 2,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-203ENST00000419255 KIAA1109Q2LD37 5005 aa4.55□□□□□ -1.68
SEMA3C-203ENST00000419255 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
SEMA3C-203ENST00000419255 DYNC1H1Q14204 4646 aaKnown RBP4.53□□□□□ -1.68
SEMA3C-203ENST00000419255 KRTAP10-1P60331 282 aa4.52□□□□□ -1.69
SEMA3C-203ENST00000419255 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
SEMA3C-203ENST00000419255 KRTAP1-4P0C5Y4 121 aa4.52□□□□□ -1.69
SEMA3C-203ENST00000419255 KRTAP3-1Q9BYR8 98 aa4.52□□□□□ -1.69
SEMA3C-203ENST00000419255 COX6B2Q6YFQ2 88 aa4.51□□□□□ -1.69
SEMA3C-203ENST00000419255 ABCA13Q86UQ4 5058 aa4.48□□□□□ -1.69
SEMA3C-203ENST00000419255 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
SEMA3C-203ENST00000419255 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
SEMA3C-203ENST00000419255 C9orf92A6NGG3 77 aa4.46□□□□□ -1.69
SEMA3C-203ENST00000419255 VPS13BQ7Z7G8 4022 aa4.46□□□□□ -1.7
SEMA3C-203ENST00000419255 RPL37P61927 97 aaKnown RBP4.45□□□□□ -1.7
SEMA3C-203ENST00000419255 TPRXLQ17RH7 258 aa4.45□□□□□ -1.7
SEMA3C-203ENST00000419255 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
SEMA3C-203ENST00000419255 A0A0D9SG42 100 aa4.43□□□□□ -1.7
SEMA3C-203ENST00000419255 FAT1Q14517 4588 aa4.43□□□□□ -1.7
SEMA3C-203ENST00000419255 HSPG2P98160 4391 aa4.43□□□□□ -1.7
SEMA3C-203ENST00000419255 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
SEMA3C-203ENST00000419255 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
SEMA3C-203ENST00000419255 C10orf95Q9H7T3 257 aa4.42□□□□□ -1.7
SEMA3C-203ENST00000419255 HERC1Q15751 4861 aa4.42□□□□□ -1.7
SEMA3C-203ENST00000419255 KRTAP4-5Q9BYR2 181 aa4.41□□□□□ -1.7
SEMA3C-203ENST00000419255 SMR3BP02814 79 aaPredicted RBP4.39□□□□□ -1.71
SEMA3C-203ENST00000419255 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
SEMA3C-203ENST00000419255 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
SEMA3C-203ENST00000419255 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
SEMA3C-203ENST00000419255 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
SEMA3C-203ENST00000419255 KRTAP10-4P60372 401 aaPredicted RBP4.33□□□□□ -1.72
SEMA3C-203ENST00000419255 Q5VSD8 79 aa4.33□□□□□ -1.72
SEMA3C-203ENST00000419255 MYCBP2O75592 4640 aa4.3□□□□□ -1.72
SEMA3C-203ENST00000419255 S4R3F8 94 aa4.3□□□□□ -1.72
SEMA3C-203ENST00000419255 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
SEMA3C-203ENST00000419255 XP32Q5T750 250 aa4.27□□□□□ -1.73
SEMA3C-203ENST00000419255 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
SEMA3C-203ENST00000419255 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
SEMA3C-203ENST00000419255 FAT3Q8TDW7 4589 aa4.21□□□□□ -1.73
SEMA3C-203ENST00000419255 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
SEMA3C-203ENST00000419255 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
SEMA3C-203ENST00000419255 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
SEMA3C-203ENST00000419255 TNXBP22105 4242 aa4.19□□□□□ -1.74
SEMA3C-203ENST00000419255 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
SEMA3C-203ENST00000419255 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
SEMA3C-203ENST00000419255 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
SEMA3C-203ENST00000419255 MT1HL1P0DM35 61 aa4.14□□□□□ -1.75
SEMA3C-203ENST00000419255 M0QZ58 72 aa4.1□□□□□ -1.75
SEMA3C-203ENST00000419255 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.75
SEMA3C-203ENST00000419255 PLAC4Q8WY50 150 aa4.09□□□□□ -1.76
SEMA3C-203ENST00000419255 RNF213Q63HN8 5207 aa4.06□□□□□ -1.76
SEMA3C-203ENST00000419255 LRP2P98164 4655 aa4.01□□□□□ -1.77
SEMA3C-203ENST00000419255 LPAP08519 4548 aa3.99□□□□□ -1.77
SEMA3C-203ENST00000419255 R4GN34 69 aa3.98□□□□□ -1.77
SEMA3C-203ENST00000419255 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
SEMA3C-203ENST00000419255 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
SEMA3C-203ENST00000419255 KRTAP19-1Q8IUB9 90 aa3.92□□□□□ -1.78
SEMA3C-203ENST00000419255 KRTAP9-2Q9BYQ4 174 aa3.89□□□□□ -1.79
SEMA3C-203ENST00000419255 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
SEMA3C-203ENST00000419255 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
SEMA3C-203ENST00000419255 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
SEMA3C-203ENST00000419255 MUC2Q02817 5179 aa3.88□□□□□ -1.79
SEMA3C-203ENST00000419255 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
SEMA3C-203ENST00000419255 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
SEMA3C-203ENST00000419255 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
SEMA3C-203ENST00000419255 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
SEMA3C-203ENST00000419255 LCE4AQ5TA78 99 aa3.78□□□□□ -1.81
SEMA3C-203ENST00000419255 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
SEMA3C-203ENST00000419255 MUC17Q685J3 4493 aa3.74□□□□□ -1.81
SEMA3C-203ENST00000419255 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
SEMA3C-203ENST00000419255 KRTAP4-1Q9BYQ7 146 aa3.71□□□□□ -1.82
SEMA3C-203ENST00000419255 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
SEMA3C-203ENST00000419255 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
SEMA3C-203ENST00000419255 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
SEMA3C-203ENST00000419255 TNP1P09430 55 aa3.69□□□□□ -1.82
SEMA3C-203ENST00000419255 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
SEMA3C-203ENST00000419255 FSIP2Q5CZC0 6907 aa3.66□□□□□ -1.82
SEMA3C-203ENST00000419255 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
SEMA3C-203ENST00000419255 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.83
SEMA3C-203ENST00000419255 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.84
SEMA3C-203ENST00000419255 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
SEMA3C-203ENST00000419255 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
SEMA3C-203ENST00000419255 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
SEMA3C-203ENST00000419255 INE1O15225 51 aa3.5□□□□□ -1.85
SEMA3C-203ENST00000419255 MT1HP80294 61 aa3.49□□□□□ -1.85
SEMA3C-203ENST00000419255 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
SEMA3C-203ENST00000419255 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
SEMA3C-203ENST00000419255 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
SEMA3C-203ENST00000419255 M0R2T5 61 aa3.45□□□□□ -1.86
SEMA3C-203ENST00000419255 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
SEMA3C-203ENST00000419255 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.86
SEMA3C-203ENST00000419255 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
SEMA3C-203ENST00000419255 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
SEMA3C-203ENST00000419255 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
SEMA3C-203ENST00000419255 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
SEMA3C-203ENST00000419255 MT2AP02795 61 aa3.32□□□□□ -1.88
SEMA3C-203ENST00000419255 MT1FP04733 61 aa3.3□□□□□ -1.88
SEMA3C-203ENST00000419255 USH2AO75445 5202 aa3.3□□□□□ -1.88
SEMA3C-203ENST00000419255 KRTAP10-10P60014 251 aa3.29□□□□□ -1.88
SEMA3C-203ENST00000419255 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
SEMA3C-203ENST00000419255 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms