RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
SMPD4P1-201ENST00000416717 LPAP08519 4548 aa5.68□□□□□ -1.5
SMPD4P1-201ENST00000416717 SPINK7P58062 85 aa5.67□□□□□ -1.5
SMPD4P1-201ENST00000416717 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
SMPD4P1-201ENST00000416717 LRP2P98164 4655 aa5.63□□□□□ -1.51
SMPD4P1-201ENST00000416717 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
SMPD4P1-201ENST00000416717 ACYP2P14621 99 aa5.62□□□□□ -1.51
SMPD4P1-201ENST00000416717 TPRXLQ17RH7 258 aa5.62□□□□□ -1.51
SMPD4P1-201ENST00000416717 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
SMPD4P1-201ENST00000416717 PCLOQ9Y6V0 5065 aa5.6□□□□□ -1.51
SMPD4P1-201ENST00000416717 ADM2Q7Z4H4 148 aa5.56□□□□□ -1.52
SMPD4P1-201ENST00000416717 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
SMPD4P1-201ENST00000416717 COX6B2Q6YFQ2 88 aa5.5□□□□□ -1.53
SMPD4P1-201ENST00000416717 SEC61BP60468 96 aaKnown RBP5.49□□□□□ -1.53
SMPD4P1-201ENST00000416717 HERC1Q15751 4861 aa5.49□□□□□ -1.53
SMPD4P1-201ENST00000416717 SPATA8Q6RVD6 105 aa5.43□□□□□ -1.54
SMPD4P1-201ENST00000416717 A0A1B0GU69 56 aa5.4□□□□□ -1.54
SMPD4P1-201ENST00000416717 KRTAP4-1Q9BYQ7 146 aa5.39□□□□□ -1.55
SMPD4P1-201ENST00000416717 ROMO1P60602 79 aa5.39□□□□□ -1.55
SMPD4P1-201ENST00000416717 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
SMPD4P1-201ENST00000416717 MIR22HGQ0VDD5 57 aa5.38□□□□□ -1.55
SMPD4P1-201ENST00000416717 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
SMPD4P1-201ENST00000416717 MUC17Q685J3 4493 aa5.37□□□□□ -1.55
SMPD4P1-201ENST00000416717 UQCR11O14957 56 aa5.35□□□□□ -1.55
SMPD4P1-201ENST00000416717 S4R3F8 94 aa5.35□□□□□ -1.55
SMPD4P1-201ENST00000416717 H1FX-AS1Q4G0G2 97 aa5.34□□□□□ -1.55
SMPD4P1-201ENST00000416717 MUC2Q02817 5179 aa5.34□□□□□ -1.55
SMPD4P1-201ENST00000416717 KRTAP3-3Q9BYR6 98 aa5.32□□□□□ -1.56
SMPD4P1-201ENST00000416717 UBR4Q5T4S7 5183 aa5.21□□□□□ -1.58
SMPD4P1-201ENST00000416717 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
SMPD4P1-201ENST00000416717 P0C880 135 aa5.19□□□□□ -1.58
SMPD4P1-201ENST00000416717 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
SMPD4P1-201ENST00000416717 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
SMPD4P1-201ENST00000416717 A0A1B0GU33 70 aa5.17□□□□□ -1.58
SMPD4P1-201ENST00000416717 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
SMPD4P1-201ENST00000416717 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
SMPD4P1-201ENST00000416717 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.58
SMPD4P1-201ENST00000416717 K7ERS5 55 aa5.14□□□□□ -1.59
SMPD4P1-201ENST00000416717 H0YAA0 97 aa5.12□□□□□ -1.59
SMPD4P1-201ENST00000416717 FLGP20930 4061 aaPredicted RBP5.11□□□□□ -1.59
SMPD4P1-201ENST00000416717 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.6
SMPD4P1-201ENST00000416717 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
SMPD4P1-201ENST00000416717 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
SMPD4P1-201ENST00000416717 LCE2CQ5TA81 110 aa5.06□□□□□ -1.6
SMPD4P1-201ENST00000416717 A0A0D9SG42 100 aa5.03□□□□□ -1.6
SMPD4P1-201ENST00000416717 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
SMPD4P1-201ENST00000416717 LORP23490 312 aaPredicted RBP4.99□□□□□ -1.61
SMPD4P1-201ENST00000416717 M0R2T5 61 aa4.98□□□□□ -1.61
SMPD4P1-201ENST00000416717 MT1HP80294 61 aa4.96□□□□□ -1.62
SMPD4P1-201ENST00000416717 M0QZ58 72 aa4.95□□□□□ -1.62
SMPD4P1-201ENST00000416717 R4GN34 69 aa4.95□□□□□ -1.62
SMPD4P1-201ENST00000416717 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.63
SMPD4P1-201ENST00000416717 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
SMPD4P1-201ENST00000416717 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
SMPD4P1-201ENST00000416717 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
SMPD4P1-201ENST00000416717 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
SMPD4P1-201ENST00000416717 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
SMPD4P1-201ENST00000416717 MT2AP02795 61 aa4.79□□□□□ -1.64
SMPD4P1-201ENST00000416717 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
SMPD4P1-201ENST00000416717 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
SMPD4P1-201ENST00000416717 MT1FP04733 61 aa4.77□□□□□ -1.65
SMPD4P1-201ENST00000416717 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
SMPD4P1-201ENST00000416717 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
SMPD4P1-201ENST00000416717 LCE2AQ5TA79 106 aaPredicted RBP4.66□□□□□ -1.66
SMPD4P1-201ENST00000416717 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
SMPD4P1-201ENST00000416717 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
SMPD4P1-201ENST00000416717 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
SMPD4P1-201ENST00000416717 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
SMPD4P1-201ENST00000416717 MT1BP07438 61 aa4.52□□□□□ -1.69
SMPD4P1-201ENST00000416717 LCE2BO14633 110 aa4.49□□□□□ -1.69
SMPD4P1-201ENST00000416717 USH2AO75445 5202 aa4.46□□□□□ -1.7
SMPD4P1-201ENST00000416717 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
SMPD4P1-201ENST00000416717 TNP1P09430 55 aa4.41□□□□□ -1.7
SMPD4P1-201ENST00000416717 MT1XP80297 61 aa4.4□□□□□ -1.71
SMPD4P1-201ENST00000416717 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
SMPD4P1-201ENST00000416717 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
SMPD4P1-201ENST00000416717 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
SMPD4P1-201ENST00000416717 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
SMPD4P1-201ENST00000416717 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
SMPD4P1-201ENST00000416717 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
SMPD4P1-201ENST00000416717 KMT2DO14686 5537 aa4.2□□□□□ -1.74
SMPD4P1-201ENST00000416717 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
SMPD4P1-201ENST00000416717 LCE2DQ5TA82 110 aaPredicted RBP4.19□□□□□ -1.74
SMPD4P1-201ENST00000416717 INE1O15225 51 aa4.16□□□□□ -1.74
SMPD4P1-201ENST00000416717 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
SMPD4P1-201ENST00000416717 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
SMPD4P1-201ENST00000416717 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
SMPD4P1-201ENST00000416717 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
SMPD4P1-201ENST00000416717 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
SMPD4P1-201ENST00000416717 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
SMPD4P1-201ENST00000416717 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
SMPD4P1-201ENST00000416717 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
SMPD4P1-201ENST00000416717 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
SMPD4P1-201ENST00000416717 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
SMPD4P1-201ENST00000416717 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
SMPD4P1-201ENST00000416717 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
SMPD4P1-201ENST00000416717 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
SMPD4P1-201ENST00000416717 MT1EP04732 61 aa3.83□□□□□ -1.8
SMPD4P1-201ENST00000416717 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
SMPD4P1-201ENST00000416717 SYNE2Q8WXH0 6885 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms