RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 SNURFQ9Y675 71 aa4.53□□□□□ -1.68
LINC01238-201ENST00000416204 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
LINC01238-201ENST00000416204 A0A1B0GVX0 72 aa4.52□□□□□ -1.69
LINC01238-201ENST00000416204 WFDC13Q8IUB5 93 aa4.52□□□□□ -1.69
LINC01238-201ENST00000416204 hDV103S1A0JD37 113 aa4.51□□□□□ -1.69
LINC01238-201ENST00000416204 MP68P56378 58 aa4.51□□□□□ -1.69
LINC01238-201ENST00000416204 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
LINC01238-201ENST00000416204 TP53AIP1Q9HCN2 124 aa4.51□□□□□ -1.69
LINC01238-201ENST00000416204 C8orf17Q9NRJ1 99 aa4.51□□□□□ -1.69
LINC01238-201ENST00000416204 ZCCHC13Q8WW36 166 aaKnown RBP4.5□□□□□ -1.69
LINC01238-201ENST00000416204 C8orf87E5RJ46 101 aa4.49□□□□□ -1.69
LINC01238-201ENST00000416204 SERP1Q9Y6X1 66 aa4.48□□□□□ -1.69
LINC01238-201ENST00000416204 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
LINC01238-201ENST00000416204 LINC00313P59037 77 aa4.46□□□□□ -1.7
LINC01238-201ENST00000416204 MRPL34Q9BQ48 92 aaKnown RBP4.46□□□□□ -1.7
LINC01238-201ENST00000416204 TRAV22A0A0B4J277 110 aa4.45□□□□□ -1.7
LINC01238-201ENST00000416204 H0Y9P7 68 aa4.45□□□□□ -1.7
LINC01238-201ENST00000416204 KMT2DO14686 5537 aa4.45□□□□□ -1.7
LINC01238-201ENST00000416204 LINC00208Q96KT6 92 aa4.43□□□□□ -1.7
LINC01238-201ENST00000416204 SPANXA2-OT1Q8N9U9 137 aa4.42□□□□□ -1.7
LINC01238-201ENST00000416204 C1orf64Q8NEQ6 169 aa4.42□□□□□ -1.7
LINC01238-201ENST00000416204 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
LINC01238-201ENST00000416204 NDUFS5O43920 106 aa4.4□□□□□ -1.71
LINC01238-201ENST00000416204 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
LINC01238-201ENST00000416204 SPINK7P58062 85 aa4.39□□□□□ -1.71
LINC01238-201ENST00000416204 LOC101927531A0A1B0GV80 90 aa4.37□□□□□ -1.71
LINC01238-201ENST00000416204 A6NN06 94 aa4.37□□□□□ -1.71
LINC01238-201ENST00000416204 Q5W150 140 aa4.31□□□□□ -1.72
LINC01238-201ENST00000416204 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
LINC01238-201ENST00000416204 V9GYY9 64 aa4.29□□□□□ -1.72
LINC01238-201ENST00000416204 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
LINC01238-201ENST00000416204 MT1BP07438 61 aa4.28□□□□□ -1.72
LINC01238-201ENST00000416204 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
LINC01238-201ENST00000416204 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
LINC01238-201ENST00000416204 Q1T7F1 81 aa4.27□□□□□ -1.73
LINC01238-201ENST00000416204 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
LINC01238-201ENST00000416204 H1FX-AS1Q4G0G2 97 aa4.25□□□□□ -1.73
LINC01238-201ENST00000416204 COA5Q86WW8 74 aa4.25□□□□□ -1.73
LINC01238-201ENST00000416204 ACYP2P14621 99 aa4.24□□□□□ -1.73
LINC01238-201ENST00000416204 Q5VV11 94 aa4.24□□□□□ -1.73
LINC01238-201ENST00000416204 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
LINC01238-201ENST00000416204 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
LINC01238-201ENST00000416204 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
LINC01238-201ENST00000416204 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
LINC01238-201ENST00000416204 C7orf65Q6ZTY9 151 aa4.21□□□□□ -1.74
LINC01238-201ENST00000416204 SPRR2EP22531 72 aa4.19□□□□□ -1.74
LINC01238-201ENST00000416204 SPRR2BP35325 72 aa4.19□□□□□ -1.74
LINC01238-201ENST00000416204 SPRR2AP35326 72 aa4.19□□□□□ -1.74
LINC01238-201ENST00000416204 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
LINC01238-201ENST00000416204 A8MUN3 132 aa4.17□□□□□ -1.74
LINC01238-201ENST00000416204 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
LINC01238-201ENST00000416204 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
LINC01238-201ENST00000416204 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
LINC01238-201ENST00000416204 CHKB-CPT1BH3BT56 60 aa4.15□□□□□ -1.75
LINC01238-201ENST00000416204 SPRR2GQ9BYE4 73 aa4.13□□□□□ -1.75
LINC01238-201ENST00000416204 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
LINC01238-201ENST00000416204 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
LINC01238-201ENST00000416204 PSPHP1O15172 72 aa4.11□□□□□ -1.75
LINC01238-201ENST00000416204 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
LINC01238-201ENST00000416204 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
LINC01238-201ENST00000416204 SPTSSBQ8NFR3 76 aa4.09□□□□□ -1.75
LINC01238-201ENST00000416204 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
LINC01238-201ENST00000416204 SPRR2DP22532 72 aa4.05□□□□□ -1.76
LINC01238-201ENST00000416204 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
LINC01238-201ENST00000416204 S4R3F8 94 aa4.04□□□□□ -1.76
LINC01238-201ENST00000416204 A0A1B0GU69 56 aa4.03□□□□□ -1.76
LINC01238-201ENST00000416204 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
LINC01238-201ENST00000416204 A6NED7 52 aa4.02□□□□□ -1.77
LINC01238-201ENST00000416204 LCA10Q71F78 164 aa4.02□□□□□ -1.77
LINC01238-201ENST00000416204 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
LINC01238-201ENST00000416204 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
LINC01238-201ENST00000416204 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
LINC01238-201ENST00000416204 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
LINC01238-201ENST00000416204 SEC61GP60059 68 aa3.99□□□□□ -1.77
LINC01238-201ENST00000416204 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
LINC01238-201ENST00000416204 UQCR11O14957 56 aa3.95□□□□□ -1.78
LINC01238-201ENST00000416204 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
LINC01238-201ENST00000416204 MT1XP80297 61 aa3.93□□□□□ -1.78
LINC01238-201ENST00000416204 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
LINC01238-201ENST00000416204 KRTAP4-8A0A0G2JLE6 195 aa3.92□□□□□ -1.78
LINC01238-201ENST00000416204 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
LINC01238-201ENST00000416204 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
LINC01238-201ENST00000416204 KRTAP4-8Q9BYQ9 185 aa3.92□□□□□ -1.78
LINC01238-201ENST00000416204 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
LINC01238-201ENST00000416204 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
LINC01238-201ENST00000416204 A8MU10 97 aa3.88□□□□□ -1.79
LINC01238-201ENST00000416204 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
LINC01238-201ENST00000416204 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
LINC01238-201ENST00000416204 A0A1B0GU33 70 aa3.86□□□□□ -1.79
LINC01238-201ENST00000416204 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
LINC01238-201ENST00000416204 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
LINC01238-201ENST00000416204 PLAC4Q8WY50 150 aa3.81□□□□□ -1.8
LINC01238-201ENST00000416204 H0YAA0 97 aa3.78□□□□□ -1.8
LINC01238-201ENST00000416204 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
LINC01238-201ENST00000416204 ADM2Q7Z4H4 148 aa3.78□□□□□ -1.8
LINC01238-201ENST00000416204 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
LINC01238-201ENST00000416204 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
LINC01238-201ENST00000416204 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
LINC01238-201ENST00000416204 K7ERS5 55 aa3.75□□□□□ -1.81
LINC01238-201ENST00000416204 M0QZ58 72 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms