RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 A0A0D9SG42 100 aa4.19□□□□□ -1.74
SIK3-203ENST00000415541 SEC61BP60468 96 aaKnown RBP4.17□□□□□ -1.74
SIK3-203ENST00000415541 VPS13BQ7Z7G8 4022 aa4.15□□□□□ -1.74
SIK3-203ENST00000415541 RPS29P62273 56 aaKnown RBP4.12□□□□□ -1.75
SIK3-203ENST00000415541 S4R3F8 94 aa4.09□□□□□ -1.75
SIK3-203ENST00000415541 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.76
SIK3-203ENST00000415541 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
SIK3-203ENST00000415541 SACSQ9NZJ4 4579 aa4.06□□□□□ -1.76
SIK3-203ENST00000415541 FAT1Q14517 4588 aa4.05□□□□□ -1.76
SIK3-203ENST00000415541 KRTAP10-8P60410 259 aa4.04□□□□□ -1.76
SIK3-203ENST00000415541 PKHD1L1Q86WI1 4243 aa4.02□□□□□ -1.77
SIK3-203ENST00000415541 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
SIK3-203ENST00000415541 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
SIK3-203ENST00000415541 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
SIK3-203ENST00000415541 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
SIK3-203ENST00000415541 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
SIK3-203ENST00000415541 XP32Q5T750 250 aa4□□□□□ -1.77
SIK3-203ENST00000415541 APOBP04114 4563 aaKnown RBP3.99□□□□□ -1.77
SIK3-203ENST00000415541 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
SIK3-203ENST00000415541 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
SIK3-203ENST00000415541 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
SIK3-203ENST00000415541 KIAA1109Q2LD37 5005 aa3.96□□□□□ -1.78
SIK3-203ENST00000415541 KRTAP3-2Q9BYR7 98 aa3.94□□□□□ -1.78
SIK3-203ENST00000415541 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
SIK3-203ENST00000415541 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
SIK3-203ENST00000415541 M0QZ58 72 aa3.92□□□□□ -1.78
SIK3-203ENST00000415541 MT1HL1P0DM35 61 aa3.92□□□□□ -1.78
SIK3-203ENST00000415541 RYR3Q15413 4870 aa3.9□□□□□ -1.79
SIK3-203ENST00000415541 M0R2T5 61 aa3.9□□□□□ -1.79
SIK3-203ENST00000415541 RYR1P21817 5038 aa3.88□□□□□ -1.79
SIK3-203ENST00000415541 KRTAP3-3Q9BYR6 98 aa3.88□□□□□ -1.79
SIK3-203ENST00000415541 RYR2Q92736 4967 aa3.87□□□□□ -1.79
SIK3-203ENST00000415541 FAT3Q8TDW7 4589 aa3.87□□□□□ -1.79
SIK3-203ENST00000415541 TNXBP22105 4242 aa3.86□□□□□ -1.79
SIK3-203ENST00000415541 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.79
SIK3-203ENST00000415541 HSPG2P98160 4391 aa3.83□□□□□ -1.8
SIK3-203ENST00000415541 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
SIK3-203ENST00000415541 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
SIK3-203ENST00000415541 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
SIK3-203ENST00000415541 R4GN34 69 aa3.81□□□□□ -1.8
SIK3-203ENST00000415541 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
SIK3-203ENST00000415541 LPAP08519 4548 aa3.71□□□□□ -1.82
SIK3-203ENST00000415541 EPPK1P58107 5090 aaKnown RBP3.7□□□□□ -1.82
SIK3-203ENST00000415541 HERC2O95714 4834 aa3.68□□□□□ -1.82
SIK3-203ENST00000415541 INE1O15225 51 aa3.65□□□□□ -1.83
SIK3-203ENST00000415541 LRP2P98164 4655 aa3.62□□□□□ -1.83
SIK3-203ENST00000415541 ABCA13Q86UQ4 5058 aa3.58□□□□□ -1.84
SIK3-203ENST00000415541 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
SIK3-203ENST00000415541 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
SIK3-203ENST00000415541 KRTAP10-10P60014 251 aa3.56□□□□□ -1.84
SIK3-203ENST00000415541 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
SIK3-203ENST00000415541 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
SIK3-203ENST00000415541 TNP1P09430 55 aa3.54□□□□□ -1.84
SIK3-203ENST00000415541 MUC17Q685J3 4493 aa3.5□□□□□ -1.85
SIK3-203ENST00000415541 HERC1Q15751 4861 aa3.44□□□□□ -1.86
SIK3-203ENST00000415541 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
SIK3-203ENST00000415541 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
SIK3-203ENST00000415541 MUC2Q02817 5179 aa3.36□□□□□ -1.87
SIK3-203ENST00000415541 RNF213Q63HN8 5207 aa3.34□□□□□ -1.87
SIK3-203ENST00000415541 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
SIK3-203ENST00000415541 MT1HP80294 61 aa3.32□□□□□ -1.88
SIK3-203ENST00000415541 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
SIK3-203ENST00000415541 UBR4Q5T4S7 5183 aa3.28□□□□□ -1.88
SIK3-203ENST00000415541 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
SIK3-203ENST00000415541 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
SIK3-203ENST00000415541 MT2AP02795 61 aa3.24□□□□□ -1.89
SIK3-203ENST00000415541 LCE2CQ5TA81 110 aa3.23□□□□□ -1.89
SIK3-203ENST00000415541 MT1FP04733 61 aa3.22□□□□□ -1.89
SIK3-203ENST00000415541 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
SIK3-203ENST00000415541 FSIP2Q5CZC0 6907 aa3.15□□□□□ -1.9
SIK3-203ENST00000415541 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
SIK3-203ENST00000415541 KRTAP19-1Q8IUB9 90 aa3.13□□□□□ -1.91
SIK3-203ENST00000415541 KRTAP9-8Q9BYQ0 159 aa3.12□□□□□ -1.91
SIK3-203ENST00000415541 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
SIK3-203ENST00000415541 KRTAP10-12P60413 245 aa3.06□□□□□ -1.92
SIK3-203ENST00000415541 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
SIK3-203ENST00000415541 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
SIK3-203ENST00000415541 MT1BP07438 61 aa3□□□□□ -1.93
SIK3-203ENST00000415541 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
SIK3-203ENST00000415541 LCE2BO14633 110 aa2.95□□□□□ -1.94
SIK3-203ENST00000415541 MT1XP80297 61 aa2.94□□□□□ -1.94
SIK3-203ENST00000415541 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
SIK3-203ENST00000415541 LCE2AQ5TA79 106 aaPredicted RBP2.93□□□□□ -1.94
SIK3-203ENST00000415541 KRTAP10-7P60409 375 aaPredicted RBP2.92□□□□□ -1.94
SIK3-203ENST00000415541 USH2AO75445 5202 aa2.88□□□□□ -1.95
SIK3-203ENST00000415541 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
SIK3-203ENST00000415541 KRTAP4-8A0A0G2JLE6 195 aa2.85□□□□□ -1.95
SIK3-203ENST00000415541 KRTAP4-8Q9BYQ9 185 aa2.85□□□□□ -1.95
SIK3-203ENST00000415541 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
SIK3-203ENST00000415541 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
SIK3-203ENST00000415541 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
SIK3-203ENST00000415541 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
SIK3-203ENST00000415541 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
SIK3-203ENST00000415541 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
SIK3-203ENST00000415541 LCE2DQ5TA82 110 aaPredicted RBP2.78□□□□□ -1.96
SIK3-203ENST00000415541 KRTAP9-6A0A140TA67 174 aa2.75□□□□□ -1.97
SIK3-203ENST00000415541 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
SIK3-203ENST00000415541 KRTAP9-2Q9BYQ4 174 aa2.74□□□□□ -1.97
SIK3-203ENST00000415541 KMT2DO14686 5537 aa2.73□□□□□ -1.97
SIK3-203ENST00000415541 KRTAP19-4Q3LI73 84 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms