RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 MT3P25713 68 aa4.66□□□□□ -1.66
LINC01090-201ENST00000415357 UBL5Q9BZL1 73 aa4.65□□□□□ -1.67
LINC01090-201ENST00000415357 USH2AO75445 5202 aa4.64□□□□□ -1.67
LINC01090-201ENST00000415357 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
LINC01090-201ENST00000415357 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
LINC01090-201ENST00000415357 FAM240AA0A1B0GVK7 77 aa4.63□□□□□ -1.67
LINC01090-201ENST00000415357 C7orf65Q6ZTY9 151 aa4.62□□□□□ -1.67
LINC01090-201ENST00000415357 IMUPQ9GZP8 106 aa4.61□□□□□ -1.67
LINC01090-201ENST00000415357 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
LINC01090-201ENST00000415357 RPS28P62857 69 aaKnown RBP4.59□□□□□ -1.67
LINC01090-201ENST00000415357 CXCL6P80162 114 aa4.59□□□□□ -1.67
LINC01090-201ENST00000415357 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
LINC01090-201ENST00000415357 UQCRQO14949 82 aa4.58□□□□□ -1.68
LINC01090-201ENST00000415357 ACYP1P07311 99 aa4.58□□□□□ -1.68
LINC01090-201ENST00000415357 C4orf26Q17RF5 130 aa4.57□□□□□ -1.68
LINC01090-201ENST00000415357 TMEM258P61165 79 aa4.54□□□□□ -1.68
LINC01090-201ENST00000415357 FAM236AA0A1B0GUQ0 79 aa4.52□□□□□ -1.69
LINC01090-201ENST00000415357 FAM236BA0A1B0GV22 79 aa4.52□□□□□ -1.69
LINC01090-201ENST00000415357 ATOX1O00244 68 aa4.52□□□□□ -1.69
LINC01090-201ENST00000415357 COX7CP15954 63 aa4.51□□□□□ -1.69
LINC01090-201ENST00000415357 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
LINC01090-201ENST00000415357 TP53AIP1Q9HCN2 124 aa4.49□□□□□ -1.69
LINC01090-201ENST00000415357 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
LINC01090-201ENST00000415357 C1orf64Q8NEQ6 169 aa4.47□□□□□ -1.69
LINC01090-201ENST00000415357 S4R3F8 94 aa4.46□□□□□ -1.7
LINC01090-201ENST00000415357 HIST1H4AP62805 103 aaKnown RBP4.45□□□□□ -1.7
LINC01090-201ENST00000415357 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
LINC01090-201ENST00000415357 LCA10Q71F78 164 aa4.44□□□□□ -1.7
LINC01090-201ENST00000415357 TRAV22A0A0B4J277 110 aa4.43□□□□□ -1.7
LINC01090-201ENST00000415357 ATP5EP2Q5VTU8 51 aa4.43□□□□□ -1.7
LINC01090-201ENST00000415357 SERP2Q8N6R1 65 aa4.43□□□□□ -1.7
LINC01090-201ENST00000415357 CYP4F30PQ9H0H9 118 aa4.43□□□□□ -1.7
LINC01090-201ENST00000415357 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
LINC01090-201ENST00000415357 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
LINC01090-201ENST00000415357 A0A087WVE0 104 aa4.41□□□□□ -1.7
LINC01090-201ENST00000415357 LOC101927531A0A1B0GV80 90 aa4.39□□□□□ -1.71
LINC01090-201ENST00000415357 H0Y9P7 68 aa4.39□□□□□ -1.71
LINC01090-201ENST00000415357 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
LINC01090-201ENST00000415357 SERP1Q9Y6X1 66 aa4.39□□□□□ -1.71
LINC01090-201ENST00000415357 ATP5EP56381 51 aaPredicted RBP4.38□□□□□ -1.71
LINC01090-201ENST00000415357 V9GYY9 64 aa4.36□□□□□ -1.71
LINC01090-201ENST00000415357 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
LINC01090-201ENST00000415357 SEC61GP60059 68 aa4.33□□□□□ -1.72
LINC01090-201ENST00000415357 NDUFC1O43677 76 aa4.32□□□□□ -1.72
LINC01090-201ENST00000415357 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
LINC01090-201ENST00000415357 MT1BP07438 61 aa4.31□□□□□ -1.72
LINC01090-201ENST00000415357 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
LINC01090-201ENST00000415357 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
LINC01090-201ENST00000415357 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
LINC01090-201ENST00000415357 KLKP1Q107X0 134 aa4.3□□□□□ -1.72
LINC01090-201ENST00000415357 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
LINC01090-201ENST00000415357 CYSTM1Q9H1C7 97 aa4.29□□□□□ -1.72
LINC01090-201ENST00000415357 TRAV7A0A075B6U4 112 aa4.28□□□□□ -1.72
LINC01090-201ENST00000415357 KRTAP19-8Q3LI54 63 aa4.28□□□□□ -1.72
LINC01090-201ENST00000415357 Q5VV11 94 aa4.27□□□□□ -1.73
LINC01090-201ENST00000415357 MP68P56378 58 aa4.26□□□□□ -1.73
LINC01090-201ENST00000415357 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
LINC01090-201ENST00000415357 C20orf197Q8N268 126 aa4.26□□□□□ -1.73
LINC01090-201ENST00000415357 H7BZZ5 65 aa4.25□□□□□ -1.73
LINC01090-201ENST00000415357 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
LINC01090-201ENST00000415357 A8MUN3 132 aa4.24□□□□□ -1.73
LINC01090-201ENST00000415357 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
LINC01090-201ENST00000415357 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
LINC01090-201ENST00000415357 SYNE2Q8WXH0 6885 aaKnown RBP4.23□□□□□ -1.73
LINC01090-201ENST00000415357 A6NN06 94 aa4.22□□□□□ -1.73
LINC01090-201ENST00000415357 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
LINC01090-201ENST00000415357 H0YAA0 97 aa4.2□□□□□ -1.74
LINC01090-201ENST00000415357 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
LINC01090-201ENST00000415357 CRIPTQ9P021 101 aa4.2□□□□□ -1.74
LINC01090-201ENST00000415357 H3BPC8 53 aa4.19□□□□□ -1.74
LINC01090-201ENST00000415357 KRTAP10-5P60370 271 aa4.18□□□□□ -1.74
LINC01090-201ENST00000415357 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
LINC01090-201ENST00000415357 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
LINC01090-201ENST00000415357 DMAC1Q96GE9 116 aa4.16□□□□□ -1.74
LINC01090-201ENST00000415357 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
LINC01090-201ENST00000415357 SNURFQ9Y675 71 aa4.13□□□□□ -1.75
LINC01090-201ENST00000415357 P0C880 135 aa4.12□□□□□ -1.75
LINC01090-201ENST00000415357 Q1T7F1 81 aa4.11□□□□□ -1.75
LINC01090-201ENST00000415357 R4GN34 69 aa4.07□□□□□ -1.76
LINC01090-201ENST00000415357 M0QZ58 72 aa4.06□□□□□ -1.76
LINC01090-201ENST00000415357 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
LINC01090-201ENST00000415357 ACYP2P14621 99 aa4.04□□□□□ -1.76
LINC01090-201ENST00000415357 MT1XP80297 61 aa4.04□□□□□ -1.76
LINC01090-201ENST00000415357 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
LINC01090-201ENST00000415357 PLAC4Q8WY50 150 aa4.03□□□□□ -1.76
LINC01090-201ENST00000415357 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
LINC01090-201ENST00000415357 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
LINC01090-201ENST00000415357 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
LINC01090-201ENST00000415357 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
LINC01090-201ENST00000415357 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
LINC01090-201ENST00000415357 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
LINC01090-201ENST00000415357 KMT2DO14686 5537 aa3.98□□□□□ -1.77
LINC01090-201ENST00000415357 SPTSSBQ8NFR3 76 aa3.97□□□□□ -1.77
LINC01090-201ENST00000415357 NEBP20929 6669 aa3.97□□□□□ -1.77
LINC01090-201ENST00000415357 PSPHP1O15172 72 aa3.96□□□□□ -1.78
LINC01090-201ENST00000415357 SPANXA2-OT1Q8N9U9 137 aa3.95□□□□□ -1.78
LINC01090-201ENST00000415357 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
LINC01090-201ENST00000415357 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
LINC01090-201ENST00000415357 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
LINC01090-201ENST00000415357 PRR15LQ9BU68 103 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms