RNA–Protein interactions for RNA: ENST00000415039.7

PSMD3-202, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-202ENST00000415039 HERC2O95714 4834 aa11.12□□□□□ -0.63
PSMD3-202ENST00000415039 A8MU10 97 aa11.11□□□□□ -0.63
PSMD3-202ENST00000415039 UQCR11O14957 56 aa11.1□□□□□ -0.63
PSMD3-202ENST00000415039 SPATA8Q6RVD6 105 aa11.05□□□□□ -0.64
PSMD3-202ENST00000415039 SEC61BP60468 96 aaKnown RBP11□□□□□ -0.65
PSMD3-202ENST00000415039 MIR22HGQ0VDD5 57 aa10.99□□□□□ -0.65
PSMD3-202ENST00000415039 H1FX-AS1Q4G0G2 97 aa10.99□□□□□ -0.65
PSMD3-202ENST00000415039 S4R3F8 94 aa10.99□□□□□ -0.65
PSMD3-202ENST00000415039 RBM12B-AS1Q9P1G2 102 aa10.99□□□□□ -0.65
PSMD3-202ENST00000415039 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
PSMD3-202ENST00000415039 PMAIP1Q13794 54 aa10.94□□□□□ -0.66
PSMD3-202ENST00000415039 ABCA13Q86UQ4 5058 aa10.92□□□□□ -0.66
PSMD3-202ENST00000415039 LRP2P98164 4655 aa10.88□□□□□ -0.67
PSMD3-202ENST00000415039 A0A1B0GU33 70 aa10.87□□□□□ -0.67
PSMD3-202ENST00000415039 A6NN06 94 aa10.82□□□□□ -0.68
PSMD3-202ENST00000415039 LPAP08519 4548 aa10.81□□□□□ -0.68
PSMD3-202ENST00000415039 H0YAA0 97 aa10.73□□□□□ -0.69
PSMD3-202ENST00000415039 PCLOQ9Y6V0 5065 aa10.73□□□□□ -0.69
PSMD3-202ENST00000415039 CSAG1Q6PB30 78 aa10.73□□□□□ -0.69
PSMD3-202ENST00000415039 KRTAP10-6P60371 365 aaPredicted RBP10.71□□□□□ -0.69
PSMD3-202ENST00000415039 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
PSMD3-202ENST00000415039 KRTAP4-1Q9BYQ7 146 aa10.64□□□□□ -0.71
PSMD3-202ENST00000415039 MUC17Q685J3 4493 aa10.63□□□□□ -0.71
PSMD3-202ENST00000415039 KTN1-AS1Q86SY8 53 aa10.63□□□□□ -0.71
PSMD3-202ENST00000415039 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
PSMD3-202ENST00000415039 P0C880 135 aa10.52□□□□□ -0.72
PSMD3-202ENST00000415039 K7ERS5 55 aa10.47□□□□□ -0.73
PSMD3-202ENST00000415039 KRTAP19-2Q3LHN2 52 aa10.46□□□□□ -0.74
PSMD3-202ENST00000415039 KRTAP13-4Q3LI77 160 aa10.44□□□□□ -0.74
PSMD3-202ENST00000415039 M0QZ58 72 aa10.39□□□□□ -0.75
PSMD3-202ENST00000415039 A0A0D9SG42 100 aa10.3□□□□□ -0.76
PSMD3-202ENST00000415039 HERC1Q15751 4861 aa10.29□□□□□ -0.76
PSMD3-202ENST00000415039 HMCN2Q8NDA2 5059 aa10.26□□□□□ -0.77
PSMD3-202ENST00000415039 R4GN34 69 aa10.16□□□□□ -0.78
PSMD3-202ENST00000415039 PRAC1Q96KF2 57 aa10.14□□□□□ -0.79
PSMD3-202ENST00000415039 KRTAP12-1P59990 96 aa10.1□□□□□ -0.79
PSMD3-202ENST00000415039 FLGP20930 4061 aaPredicted RBP10.09□□□□□ -0.79
PSMD3-202ENST00000415039 KRTAP12-2P59991 146 aa10.08□□□□□ -0.8
PSMD3-202ENST00000415039 ROMO1P60602 79 aa10.07□□□□□ -0.8
PSMD3-202ENST00000415039 SPINT4Q6UDR6 99 aa10.05□□□□□ -0.8
PSMD3-202ENST00000415039 LCE2CQ5TA81 110 aa10.04□□□□□ -0.8
PSMD3-202ENST00000415039 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
PSMD3-202ENST00000415039 CRIPTQ9P021 101 aa9.97□□□□□ -0.81
PSMD3-202ENST00000415039 LINC01554Q52M75 96 aa9.95□□□□□ -0.82
PSMD3-202ENST00000415039 MUC2Q02817 5179 aa9.92□□□□□ -0.82
PSMD3-202ENST00000415039 KRTAP25-1Q3LHN0 102 aa9.88□□□□□ -0.83
PSMD3-202ENST00000415039 MT1HP80294 61 aa9.81□□□□□ -0.84
PSMD3-202ENST00000415039 M0R2T5 61 aa9.77□□□□□ -0.85
PSMD3-202ENST00000415039 RNF213Q63HN8 5207 aa9.71□□□□□ -0.85
PSMD3-202ENST00000415039 UBR4Q5T4S7 5183 aa9.69□□□□□ -0.86
PSMD3-202ENST00000415039 SPRR2GQ9BYE4 73 aa9.6□□□□□ -0.87
PSMD3-202ENST00000415039 CAMK2N1Q7Z7J9 78 aa9.57□□□□□ -0.88
PSMD3-202ENST00000415039 C10orf95Q9H7T3 257 aa9.54□□□□□ -0.88
PSMD3-202ENST00000415039 FAT4Q6V0I7 4981 aa9.53□□□□□ -0.88
PSMD3-202ENST00000415039 MT2AP02795 61 aa9.53□□□□□ -0.88
PSMD3-202ENST00000415039 KRTAP9-8Q9BYQ0 159 aa9.51□□□□□ -0.89
PSMD3-202ENST00000415039 KRTAP10-10P60014 251 aa9.49□□□□□ -0.89
PSMD3-202ENST00000415039 KRTAP19-1Q8IUB9 90 aa9.49□□□□□ -0.89
PSMD3-202ENST00000415039 MT1FP04733 61 aa9.47□□□□□ -0.89
PSMD3-202ENST00000415039 PLAC4Q8WY50 150 aa9.4□□□□□ -0.9
PSMD3-202ENST00000415039 KRTAP19-8Q3LI54 63 aa9.29□□□□□ -0.92
PSMD3-202ENST00000415039 PP632Q6XCG6 107 aa9.23□□□□□ -0.93
PSMD3-202ENST00000415039 TNP1P09430 55 aa9.21□□□□□ -0.93
PSMD3-202ENST00000415039 KRTAP9-3Q9BYQ3 159 aa9.16□□□□□ -0.94
PSMD3-202ENST00000415039 KRTAP23-1A1A580 65 aa9.12□□□□□ -0.95
PSMD3-202ENST00000415039 LCE2AQ5TA79 106 aaPredicted RBP9.11□□□□□ -0.95
PSMD3-202ENST00000415039 MT1BP07438 61 aa9.08□□□□□ -0.96
PSMD3-202ENST00000415039 KRTAP10-5P60370 271 aa8.88□□□□□ -0.99
PSMD3-202ENST00000415039 MT1XP80297 61 aa8.88□□□□□ -0.99
PSMD3-202ENST00000415039 KRTAP15-1Q3LI76 137 aa8.85□□□□□ -0.99
PSMD3-202ENST00000415039 LCE2BO14633 110 aa8.81□□□□□ -1
PSMD3-202ENST00000415039 PRO2289Q9P1D8 64 aa8.8□□□□□ -1
PSMD3-202ENST00000415039 LCE3AQ5TA76 89 aa8.68□□□□□ -1.02
PSMD3-202ENST00000415039 KRTAP10-12P60413 245 aa8.59□□□□□ -1.03
PSMD3-202ENST00000415039 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
PSMD3-202ENST00000415039 KRTAP8-1Q8IUC2 63 aa8.57□□□□□ -1.04
PSMD3-202ENST00000415039 KRTAP10-7P60409 375 aaPredicted RBP8.52□□□□□ -1.04
PSMD3-202ENST00000415039 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.04
PSMD3-202ENST00000415039 KRTAP12-3P60328 96 aa8.35□□□□□ -1.07
PSMD3-202ENST00000415039 SPRR5A0A1B0GTR4 108 aa8.32□□□□□ -1.08
PSMD3-202ENST00000415039 NDUFAF8A1L188 74 aa8.32□□□□□ -1.08
PSMD3-202ENST00000415039 USH2AO75445 5202 aa8.31□□□□□ -1.08
PSMD3-202ENST00000415039 LUZP6Q538Z0 58 aa8.27□□□□□ -1.09
PSMD3-202ENST00000415039 KRTAP19-6Q3LI70 58 aa8.21□□□□□ -1.1
PSMD3-202ENST00000415039 CRCT1Q9UGL9 99 aa8.18□□□□□ -1.1
PSMD3-202ENST00000415039 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
PSMD3-202ENST00000415039 KRTAP19-5Q3LI72 72 aa8.13□□□□□ -1.11
PSMD3-202ENST00000415039 KRTAP4-8A0A0G2JLE6 195 aa8.06□□□□□ -1.12
PSMD3-202ENST00000415039 KRTAP4-8Q9BYQ9 185 aa8.06□□□□□ -1.12
PSMD3-202ENST00000415039 SSPOA2VEC9 5147 aa8.04□□□□□ -1.12
PSMD3-202ENST00000415039 FSIP2Q5CZC0 6907 aa8.03□□□□□ -1.12
PSMD3-202ENST00000415039 H3BS24 57 aa8.01□□□□□ -1.13
PSMD3-202ENST00000415039 KRTAP19-7Q3SYF9 63 aa7.92□□□□□ -1.14
PSMD3-202ENST00000415039 KRTAP19-4Q3LI73 84 aa7.88□□□□□ -1.15
PSMD3-202ENST00000415039 LCE3CQ5T5A8 94 aa7.84□□□□□ -1.15
PSMD3-202ENST00000415039 KMT2DO14686 5537 aa7.79□□□□□ -1.16
PSMD3-202ENST00000415039 MT1EP04732 61 aa7.76□□□□□ -1.17
PSMD3-202ENST00000415039 MT1LQ93083 61 aa7.67□□□□□ -1.18
PSMD3-202ENST00000415039 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
PSMD3-202ENST00000415039 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms