RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 RPL37P61927 97 aaKnown RBP8.09□□□□□ -1.11
LRCH3-202ENST00000414675 UQCR11O14957 56 aa8.07□□□□□ -1.12
LRCH3-202ENST00000414675 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
LRCH3-202ENST00000414675 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
LRCH3-202ENST00000414675 SEC61GP60059 68 aa8.04□□□□□ -1.12
LRCH3-202ENST00000414675 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
LRCH3-202ENST00000414675 LRP2P98164 4655 aa7.97□□□□□ -1.13
LRCH3-202ENST00000414675 LPAP08519 4548 aa7.94□□□□□ -1.14
LRCH3-202ENST00000414675 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
LRCH3-202ENST00000414675 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
LRCH3-202ENST00000414675 PCLOQ9Y6V0 5065 aa7.85□□□□□ -1.15
LRCH3-202ENST00000414675 J3QL48 77 aa7.82□□□□□ -1.16
LRCH3-202ENST00000414675 A0A1B0GU33 70 aa7.8□□□□□ -1.16
LRCH3-202ENST00000414675 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
LRCH3-202ENST00000414675 H0YAA0 97 aa7.78□□□□□ -1.16
LRCH3-202ENST00000414675 H1FX-AS1Q4G0G2 97 aa7.77□□□□□ -1.17
LRCH3-202ENST00000414675 PRAC1Q96KF2 57 aa7.77□□□□□ -1.17
LRCH3-202ENST00000414675 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
LRCH3-202ENST00000414675 S4R3F8 94 aa7.72□□□□□ -1.17
LRCH3-202ENST00000414675 HERC1Q15751 4861 aa7.69□□□□□ -1.18
LRCH3-202ENST00000414675 MUC17Q685J3 4493 aa7.64□□□□□ -1.19
LRCH3-202ENST00000414675 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
LRCH3-202ENST00000414675 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
LRCH3-202ENST00000414675 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
LRCH3-202ENST00000414675 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.19
LRCH3-202ENST00000414675 K7ERS5 55 aa7.58□□□□□ -1.2
LRCH3-202ENST00000414675 CSAG1Q6PB30 78 aa7.57□□□□□ -1.2
LRCH3-202ENST00000414675 HMCN2Q8NDA2 5059 aa7.57□□□□□ -1.2
LRCH3-202ENST00000414675 P0C880 135 aa7.52□□□□□ -1.21
LRCH3-202ENST00000414675 KRTAP13-4Q3LI77 160 aa7.51□□□□□ -1.21
LRCH3-202ENST00000414675 LINC01554Q52M75 96 aa7.49□□□□□ -1.21
LRCH3-202ENST00000414675 A0A0D9SG42 100 aa7.45□□□□□ -1.22
LRCH3-202ENST00000414675 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
LRCH3-202ENST00000414675 MUC2Q02817 5179 aa7.38□□□□□ -1.23
LRCH3-202ENST00000414675 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
LRCH3-202ENST00000414675 ROMO1P60602 79 aa7.35□□□□□ -1.23
LRCH3-202ENST00000414675 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
LRCH3-202ENST00000414675 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.25
LRCH3-202ENST00000414675 UBR4Q5T4S7 5183 aa7.25□□□□□ -1.25
LRCH3-202ENST00000414675 M0QZ58 72 aa7.22□□□□□ -1.25
LRCH3-202ENST00000414675 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
LRCH3-202ENST00000414675 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
LRCH3-202ENST00000414675 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
LRCH3-202ENST00000414675 KRTAP12-1P59990 96 aa7.18□□□□□ -1.26
LRCH3-202ENST00000414675 RNF213Q63HN8 5207 aa7.17□□□□□ -1.26
LRCH3-202ENST00000414675 R4GN34 69 aa7.13□□□□□ -1.27
LRCH3-202ENST00000414675 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
LRCH3-202ENST00000414675 FAT4Q6V0I7 4981 aa7.09□□□□□ -1.27
LRCH3-202ENST00000414675 C10orf95Q9H7T3 257 aa7.06□□□□□ -1.28
LRCH3-202ENST00000414675 MT1HP80294 61 aa6.9□□□□□ -1.3
LRCH3-202ENST00000414675 M0R2T5 61 aa6.84□□□□□ -1.31
LRCH3-202ENST00000414675 CAMK2N1Q7Z7J9 78 aa6.74□□□□□ -1.33
LRCH3-202ENST00000414675 MT2AP02795 61 aa6.72□□□□□ -1.33
LRCH3-202ENST00000414675 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
LRCH3-202ENST00000414675 MT1FP04733 61 aa6.71□□□□□ -1.33
LRCH3-202ENST00000414675 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.34
LRCH3-202ENST00000414675 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.34
LRCH3-202ENST00000414675 H3BS24 57 aa6.69□□□□□ -1.34
LRCH3-202ENST00000414675 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
LRCH3-202ENST00000414675 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-202ENST00000414675 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
LRCH3-202ENST00000414675 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-202ENST00000414675 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
LRCH3-202ENST00000414675 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
LRCH3-202ENST00000414675 NDUFAF8A1L188 74 aa6.5□□□□□ -1.37
LRCH3-202ENST00000414675 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
LRCH3-202ENST00000414675 TNP1P09430 55 aa6.46□□□□□ -1.37
LRCH3-202ENST00000414675 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
LRCH3-202ENST00000414675 MT1BP07438 61 aa6.43□□□□□ -1.38
LRCH3-202ENST00000414675 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
LRCH3-202ENST00000414675 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
LRCH3-202ENST00000414675 MT1XP80297 61 aa6.29□□□□□ -1.4
LRCH3-202ENST00000414675 LCE2BO14633 110 aa6.25□□□□□ -1.41
LRCH3-202ENST00000414675 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
LRCH3-202ENST00000414675 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
LRCH3-202ENST00000414675 USH2AO75445 5202 aa6.12□□□□□ -1.43
LRCH3-202ENST00000414675 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
LRCH3-202ENST00000414675 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
LRCH3-202ENST00000414675 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
LRCH3-202ENST00000414675 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
LRCH3-202ENST00000414675 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
LRCH3-202ENST00000414675 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
LRCH3-202ENST00000414675 FSIP2Q5CZC0 6907 aa5.92□□□□□ -1.46
LRCH3-202ENST00000414675 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
LRCH3-202ENST00000414675 KMT2DO14686 5537 aa5.86□□□□□ -1.47
LRCH3-202ENST00000414675 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
LRCH3-202ENST00000414675 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
LRCH3-202ENST00000414675 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
LRCH3-202ENST00000414675 KRTAP19-5Q3LI72 72 aa5.78□□□□□ -1.48
LRCH3-202ENST00000414675 KRTAP19-6Q3LI70 58 aa5.76□□□□□ -1.49
LRCH3-202ENST00000414675 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
LRCH3-202ENST00000414675 FCGBPQ9Y6R7 5405 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-202ENST00000414675 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
LRCH3-202ENST00000414675 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
LRCH3-202ENST00000414675 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
LRCH3-202ENST00000414675 MT1EP04732 61 aa5.48□□□□□ -1.53
LRCH3-202ENST00000414675 MT1LQ93083 61 aa5.42□□□□□ -1.54
LRCH3-202ENST00000414675 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
LRCH3-202ENST00000414675 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
LRCH3-202ENST00000414675 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms