RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 FAM236AA0A1B0GUQ0 79 aa11.72□□□□□ -0.53
CPNE1-207ENST00000414664 FAM236BA0A1B0GV22 79 aa11.72□□□□□ -0.53
CPNE1-207ENST00000414664 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
CPNE1-207ENST00000414664 SSPOA2VEC9 5147 aa11.69□□□□□ -0.54
CPNE1-207ENST00000414664 NDUFC1O43677 76 aa11.64□□□□□ -0.55
CPNE1-207ENST00000414664 SMIM20Q8N5G0 67 aa11.63□□□□□ -0.55
CPNE1-207ENST00000414664 KRTAP19-1Q8IUB9 90 aa11.56□□□□□ -0.56
CPNE1-207ENST00000414664 TRAV7A0A075B6U4 112 aa11.55□□□□□ -0.56
CPNE1-207ENST00000414664 DMAC1Q96GE9 116 aa11.45□□□□□ -0.58
CPNE1-207ENST00000414664 KRTAP19-6Q3LI70 58 aa11.44□□□□□ -0.58
CPNE1-207ENST00000414664 H0YAA0 97 aa11.43□□□□□ -0.58
CPNE1-207ENST00000414664 SPRR2GQ9BYE4 73 aa11.42□□□□□ -0.58
CPNE1-207ENST00000414664 CRIPTQ9P021 101 aa11.41□□□□□ -0.58
CPNE1-207ENST00000414664 FCGBPQ9Y6R7 5405 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-207ENST00000414664 Q5VV11 94 aa11.31□□□□□ -0.6
CPNE1-207ENST00000414664 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-207ENST00000414664 ADM2Q7Z4H4 148 aa11.3□□□□□ -0.6
CPNE1-207ENST00000414664 ACYP2P14621 99 aa11.29□□□□□ -0.6
CPNE1-207ENST00000414664 KRTAP19-8Q3LI54 63 aa11.29□□□□□ -0.6
CPNE1-207ENST00000414664 SERP2Q8N6R1 65 aa11.27□□□□□ -0.61
CPNE1-207ENST00000414664 SNURFQ9Y675 71 aa11.25□□□□□ -0.61
CPNE1-207ENST00000414664 MT1BP07438 61 aa11.23□□□□□ -0.61
CPNE1-207ENST00000414664 C20orf197Q8N268 126 aa11.19□□□□□ -0.62
CPNE1-207ENST00000414664 SPTSSBQ8NFR3 76 aa11.13□□□□□ -0.63
CPNE1-207ENST00000414664 SPANXA2-OT1Q8N9U9 137 aa11.11□□□□□ -0.63
CPNE1-207ENST00000414664 KRTAP9-7A8MTY7 169 aa11.08□□□□□ -0.64
CPNE1-207ENST00000414664 CHKB-CPT1BH3BT56 60 aa11.08□□□□□ -0.64
CPNE1-207ENST00000414664 A6NN06 94 aa11.06□□□□□ -0.64
CPNE1-207ENST00000414664 P0C880 135 aa11.04□□□□□ -0.64
CPNE1-207ENST00000414664 R4GN34 69 aa11.02□□□□□ -0.65
CPNE1-207ENST00000414664 MACF1Q9UPN3 7388 aaKnown RBP11.02□□□□□ -0.65
CPNE1-207ENST00000414664 COX7CP15954 63 aa10.99□□□□□ -0.65
CPNE1-207ENST00000414664 KRTAP3-2Q9BYR7 98 aa10.98□□□□□ -0.65
CPNE1-207ENST00000414664 KRTAP10-5P60370 271 aa10.94□□□□□ -0.66
CPNE1-207ENST00000414664 M0QZ58 72 aa10.93□□□□□ -0.66
CPNE1-207ENST00000414664 SYNE2Q8WXH0 6885 aaKnown RBP10.85□□□□□ -0.67
CPNE1-207ENST00000414664 PLAC4Q8WY50 150 aa10.84□□□□□ -0.67
CPNE1-207ENST00000414664 COA5Q86WW8 74 aa10.76□□□□□ -0.69
CPNE1-207ENST00000414664 ANAPC13Q9BS18 74 aa10.76□□□□□ -0.69
CPNE1-207ENST00000414664 LINC01554Q52M75 96 aa10.75□□□□□ -0.69
CPNE1-207ENST00000414664 H7BZZ5 65 aa10.73□□□□□ -0.69
CPNE1-207ENST00000414664 PRO2289Q9P1D8 64 aa10.72□□□□□ -0.69
CPNE1-207ENST00000414664 KRTAP6-3Q3LI67 103 aa10.69□□□□□ -0.7
CPNE1-207ENST00000414664 CYSTM1Q9H1C7 97 aa10.69□□□□□ -0.7
CPNE1-207ENST00000414664 MT1XP80297 61 aa10.6□□□□□ -0.71
CPNE1-207ENST00000414664 SEC61GP60059 68 aa10.55□□□□□ -0.72
CPNE1-207ENST00000414664 SERP1Q9Y6X1 66 aa10.52□□□□□ -0.73
CPNE1-207ENST00000414664 CCDC179H3BU77 68 aa10.48□□□□□ -0.73
CPNE1-207ENST00000414664 KRTAP13-4Q3LI77 160 aa10.41□□□□□ -0.74
CPNE1-207ENST00000414664 ATP5EP56381 51 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-207ENST00000414664 KRTAP12-2P59991 146 aa10.33□□□□□ -0.76
CPNE1-207ENST00000414664 KRTAP5-9P26371 169 aa10.3□□□□□ -0.76
CPNE1-207ENST00000414664 A0A1B0GU33 70 aa10.29□□□□□ -0.76
CPNE1-207ENST00000414664 A0A1B0GU69 56 aa10.25□□□□□ -0.77
CPNE1-207ENST00000414664 CAMK2N1Q7Z7J9 78 aa10.2□□□□□ -0.78
CPNE1-207ENST00000414664 MUC12Q9UKN1 5478 aa10.2□□□□□ -0.78
CPNE1-207ENST00000414664 SPATA8Q6RVD6 105 aa10.19□□□□□ -0.78
CPNE1-207ENST00000414664 KMT2DO14686 5537 aa10.18□□□□□ -0.78
CPNE1-207ENST00000414664 A0A0D9SG42 100 aa10.17□□□□□ -0.78
CPNE1-207ENST00000414664 NEBP20929 6669 aa10.17□□□□□ -0.78
CPNE1-207ENST00000414664 TMEM258P61165 79 aa10.16□□□□□ -0.78
CPNE1-207ENST00000414664 KRTAP8-1Q8IUC2 63 aa10.15□□□□□ -0.78
CPNE1-207ENST00000414664 KRTAP10-7P60409 375 aaPredicted RBP10.11□□□□□ -0.79
CPNE1-207ENST00000414664 KRTAP10-12P60413 245 aa10.09□□□□□ -0.79
CPNE1-207ENST00000414664 SPRR2FQ96RM1 72 aa10.08□□□□□ -0.8
CPNE1-207ENST00000414664 PRR15LQ9BU68 103 aa10.06□□□□□ -0.8
CPNE1-207ENST00000414664 SPINT4Q6UDR6 99 aa10.05□□□□□ -0.8
CPNE1-207ENST00000414664 KRTAP4-8A0A0G2JLE6 195 aa10.04□□□□□ -0.8
CPNE1-207ENST00000414664 KRTAP4-8Q9BYQ9 185 aa10.04□□□□□ -0.8
CPNE1-207ENST00000414664 SMIM26A0A096LP01 95 aa10.03□□□□□ -0.8
CPNE1-207ENST00000414664 LINC01558Q9Y6Z2 57 aa9.98□□□□□ -0.81
CPNE1-207ENST00000414664 MDN1Q9NU22 5596 aa9.96□□□□□ -0.81
CPNE1-207ENST00000414664 KRTAP12-1P59990 96 aa9.96□□□□□ -0.82
CPNE1-207ENST00000414664 SPRR2EP22531 72 aa9.87□□□□□ -0.83
CPNE1-207ENST00000414664 SPRR2BP35325 72 aa9.87□□□□□ -0.83
CPNE1-207ENST00000414664 SPRR2AP35326 72 aa9.87□□□□□ -0.83
CPNE1-207ENST00000414664 A8MU10 97 aa9.86□□□□□ -0.83
CPNE1-207ENST00000414664 KRTAP20-1Q3LI63 56 aa9.76□□□□□ -0.85
CPNE1-207ENST00000414664 LCE1AQ5T7P2 110 aa9.75□□□□□ -0.85
CPNE1-207ENST00000414664 UQCR11O14957 56 aa9.71□□□□□ -0.86
CPNE1-207ENST00000414664 KRTAP2-3P0C7H8 128 aa9.61□□□□□ -0.87
CPNE1-207ENST00000414664 KRTAP2-4Q9BYR9 128 aa9.61□□□□□ -0.87
CPNE1-207ENST00000414664 V9GYY9 64 aa9.61□□□□□ -0.87
CPNE1-207ENST00000414664 SPRR2DP22532 72 aa9.54□□□□□ -0.88
CPNE1-207ENST00000414664 PCP4P48539 62 aa9.52□□□□□ -0.89
CPNE1-207ENST00000414664 MIR22HGQ0VDD5 57 aa9.5□□□□□ -0.89
CPNE1-207ENST00000414664 Q1T7F1 81 aa9.5□□□□□ -0.89
CPNE1-207ENST00000414664 C10orf95Q9H7T3 257 aa9.5□□□□□ -0.89
CPNE1-207ENST00000414664 TNP1P09430 55 aa9.48□□□□□ -0.89
CPNE1-207ENST00000414664 KRTAP19-7Q3SYF9 63 aa9.47□□□□□ -0.89
CPNE1-207ENST00000414664 PSPHP1O15172 72 aa9.45□□□□□ -0.9
CPNE1-207ENST00000414664 MT1EP04732 61 aa9.38□□□□□ -0.91
CPNE1-207ENST00000414664 K7ERS5 55 aa9.33□□□□□ -0.92
CPNE1-207ENST00000414664 KRTAP19-5Q3LI72 72 aa9.32□□□□□ -0.92
CPNE1-207ENST00000414664 KRTAP2-2Q9BYT5 123 aa9.32□□□□□ -0.92
CPNE1-207ENST00000414664 KRTAP2-1Q9BYU5 128 aa9.32□□□□□ -0.92
CPNE1-207ENST00000414664 RPS28P62857 69 aaKnown RBP9.28□□□□□ -0.92
CPNE1-207ENST00000414664 KRTAP19-3Q7Z4W3 81 aa9.27□□□□□ -0.93
CPNE1-207ENST00000414664 LCE3AQ5TA76 89 aa9.25□□□□□ -0.93
CPNE1-207ENST00000414664 LCE3BQ5TA77 95 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms