RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 FAM236CP0DP71 79 aa4.28□□□□□ -1.72
HERPUD2-203ENST00000413517 PDE6GP18545 87 aa4.28□□□□□ -1.72
HERPUD2-203ENST00000413517 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
HERPUD2-203ENST00000413517 A0A1B0GW54 56 aa4.27□□□□□ -1.73
HERPUD2-203ENST00000413517 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
HERPUD2-203ENST00000413517 KRTAP9-8Q9BYQ0 159 aa4.27□□□□□ -1.73
HERPUD2-203ENST00000413517 UBL5Q9BZL1 73 aa4.27□□□□□ -1.73
HERPUD2-203ENST00000413517 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
HERPUD2-203ENST00000413517 TRAV7A0A075B6U4 112 aa4.25□□□□□ -1.73
HERPUD2-203ENST00000413517 MMP24-AS1A0A0U1RRL7 71 aa4.24□□□□□ -1.73
HERPUD2-203ENST00000413517 NDUFB1O75438 58 aa4.24□□□□□ -1.73
HERPUD2-203ENST00000413517 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
HERPUD2-203ENST00000413517 LINC00846Q9NV44 126 aa4.24□□□□□ -1.73
HERPUD2-203ENST00000413517 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
HERPUD2-203ENST00000413517 K7EQZ3 153 aa4.23□□□□□ -1.73
HERPUD2-203ENST00000413517 NREPQ16612 68 aa4.23□□□□□ -1.73
HERPUD2-203ENST00000413517 SPINK7P58062 85 aa4.22□□□□□ -1.73
HERPUD2-203ENST00000413517 MT2AP02795 61 aa4.21□□□□□ -1.74
HERPUD2-203ENST00000413517 KLKP1Q107X0 134 aa4.21□□□□□ -1.74
HERPUD2-203ENST00000413517 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
HERPUD2-203ENST00000413517 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
HERPUD2-203ENST00000413517 TMEM254Q8TBM7 123 aa4.2□□□□□ -1.74
HERPUD2-203ENST00000413517 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
HERPUD2-203ENST00000413517 A0A087WVE0 104 aa4.19□□□□□ -1.74
HERPUD2-203ENST00000413517 MT1FP04733 61 aa4.19□□□□□ -1.74
HERPUD2-203ENST00000413517 Q8N9L7 120 aa4.19□□□□□ -1.74
HERPUD2-203ENST00000413517 MRPL34Q9BQ48 92 aaKnown RBP4.19□□□□□ -1.74
HERPUD2-203ENST00000413517 H7BZZ5 65 aa4.18□□□□□ -1.74
HERPUD2-203ENST00000413517 BPY2O14599 106 aa4.18□□□□□ -1.74
HERPUD2-203ENST00000413517 hDV103S1A0JD37 113 aa4.17□□□□□ -1.74
HERPUD2-203ENST00000413517 WFDC13Q8IUB5 93 aa4.17□□□□□ -1.74
HERPUD2-203ENST00000413517 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
HERPUD2-203ENST00000413517 Q5W150 140 aa4.16□□□□□ -1.74
HERPUD2-203ENST00000413517 MP68P56378 58 aa4.15□□□□□ -1.75
HERPUD2-203ENST00000413517 CASC2Q6XLA1 102 aa4.12□□□□□ -1.75
HERPUD2-203ENST00000413517 KRTAP10-10P60014 251 aa4.11□□□□□ -1.75
HERPUD2-203ENST00000413517 HCG22E2RYF7 251 aa4.1□□□□□ -1.75
HERPUD2-203ENST00000413517 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
HERPUD2-203ENST00000413517 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
HERPUD2-203ENST00000413517 MT3P25713 68 aa4.09□□□□□ -1.75
HERPUD2-203ENST00000413517 SNURFQ9Y675 71 aa4.09□□□□□ -1.75
HERPUD2-203ENST00000413517 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
HERPUD2-203ENST00000413517 C7orf65Q6ZTY9 151 aa4.07□□□□□ -1.76
HERPUD2-203ENST00000413517 H1FX-AS1Q4G0G2 97 aa4.06□□□□□ -1.76
HERPUD2-203ENST00000413517 USH2AO75445 5202 aa4.06□□□□□ -1.76
HERPUD2-203ENST00000413517 Q1T7F1 81 aa4.04□□□□□ -1.76
HERPUD2-203ENST00000413517 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
HERPUD2-203ENST00000413517 SSPOA2VEC9 5147 aa4.01□□□□□ -1.77
HERPUD2-203ENST00000413517 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
HERPUD2-203ENST00000413517 H3BPC8 53 aa3.97□□□□□ -1.77
HERPUD2-203ENST00000413517 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
HERPUD2-203ENST00000413517 TP53AIP1Q9HCN2 124 aa3.96□□□□□ -1.78
HERPUD2-203ENST00000413517 K7ERS5 55 aa3.95□□□□□ -1.78
HERPUD2-203ENST00000413517 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
HERPUD2-203ENST00000413517 SPANXA2-OT1Q8N9U9 137 aa3.94□□□□□ -1.78
HERPUD2-203ENST00000413517 C1orf64Q8NEQ6 169 aa3.94□□□□□ -1.78
HERPUD2-203ENST00000413517 LCA10Q71F78 164 aa3.93□□□□□ -1.78
HERPUD2-203ENST00000413517 TRAV22A0A0B4J277 110 aa3.92□□□□□ -1.78
HERPUD2-203ENST00000413517 S4R3F8 94 aa3.92□□□□□ -1.78
HERPUD2-203ENST00000413517 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
HERPUD2-203ENST00000413517 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
HERPUD2-203ENST00000413517 LOC101927531A0A1B0GV80 90 aa3.87□□□□□ -1.79
HERPUD2-203ENST00000413517 CHKB-CPT1BH3BT56 60 aa3.87□□□□□ -1.79
HERPUD2-203ENST00000413517 CSAG1Q6PB30 78 aa3.87□□□□□ -1.79
HERPUD2-203ENST00000413517 A8MUN3 132 aa3.86□□□□□ -1.79
HERPUD2-203ENST00000413517 H0Y9P7 68 aa3.86□□□□□ -1.79
HERPUD2-203ENST00000413517 MT1BP07438 61 aa3.85□□□□□ -1.79
HERPUD2-203ENST00000413517 Q5VV11 94 aa3.85□□□□□ -1.79
HERPUD2-203ENST00000413517 A6NED7 52 aa3.84□□□□□ -1.79
HERPUD2-203ENST00000413517 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
HERPUD2-203ENST00000413517 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
HERPUD2-203ENST00000413517 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
HERPUD2-203ENST00000413517 ADM2Q7Z4H4 148 aa3.83□□□□□ -1.8
HERPUD2-203ENST00000413517 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
HERPUD2-203ENST00000413517 SPTSSBQ8NFR3 76 aa3.8□□□□□ -1.8
HERPUD2-203ENST00000413517 A6NN06 94 aa3.79□□□□□ -1.8
HERPUD2-203ENST00000413517 COA5Q86WW8 74 aa3.79□□□□□ -1.8
HERPUD2-203ENST00000413517 LINC01558Q9Y6Z2 57 aa3.79□□□□□ -1.8
HERPUD2-203ENST00000413517 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
HERPUD2-203ENST00000413517 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
HERPUD2-203ENST00000413517 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
HERPUD2-203ENST00000413517 H0YAA0 97 aa3.72□□□□□ -1.81
HERPUD2-203ENST00000413517 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
HERPUD2-203ENST00000413517 CRIPTQ9P021 101 aa3.71□□□□□ -1.82
HERPUD2-203ENST00000413517 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
HERPUD2-203ENST00000413517 SPINT4Q6UDR6 99 aa3.68□□□□□ -1.82
HERPUD2-203ENST00000413517 DMAC1Q96GE9 116 aa3.68□□□□□ -1.82
HERPUD2-203ENST00000413517 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
HERPUD2-203ENST00000413517 P0C880 135 aa3.67□□□□□ -1.82
HERPUD2-203ENST00000413517 ACYP2P14621 99 aa3.67□□□□□ -1.82
HERPUD2-203ENST00000413517 A8MU10 97 aa3.66□□□□□ -1.82
HERPUD2-203ENST00000413517 LINC01554Q52M75 96 aa3.63□□□□□ -1.83
HERPUD2-203ENST00000413517 A0A1B0GU33 70 aa3.61□□□□□ -1.83
HERPUD2-203ENST00000413517 MT1XP80297 61 aa3.61□□□□□ -1.83
HERPUD2-203ENST00000413517 SPATA8Q6RVD6 105 aa3.61□□□□□ -1.83
HERPUD2-203ENST00000413517 A0A1B0GU69 56 aa3.6□□□□□ -1.83
HERPUD2-203ENST00000413517 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
HERPUD2-203ENST00000413517 UQCR11O14957 56 aa3.59□□□□□ -1.83
HERPUD2-203ENST00000413517 M0QZ58 72 aa3.57□□□□□ -1.84
HERPUD2-203ENST00000413517 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms