RNA–Protein interactions for RNA: ENST00000412318.5

ANKRD28-202, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 4,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-202ENST00000412318 LYSTQ99698 3801 aa2.48□□□□□ -2.01
ANKRD28-202ENST00000412318 KRTAP13-1Q8IUC0 172 aa2.48□□□□□ -2.01
ANKRD28-202ENST00000412318 KIAA1109Q2LD37 5005 aa2.47□□□□□ -2.01
ANKRD28-202ENST00000412318 ABCA13Q86UQ4 5058 aa2.46□□□□□ -2.02
ANKRD28-202ENST00000412318 DNAH10Q8IVF4 4471 aa2.46□□□□□ -2.02
ANKRD28-202ENST00000412318 A0A1B0GVY2 172 aa2.45□□□□□ -2.02
ANKRD28-202ENST00000412318 LCE2BO14633 110 aa2.45□□□□□ -2.02
ANKRD28-202ENST00000412318 DYNC1H1Q14204 4646 aaKnown RBP2.45□□□□□ -2.02
ANKRD28-202ENST00000412318 KRTAP9-2Q9BYQ4 174 aa2.44□□□□□ -2.02
ANKRD28-202ENST00000412318 DNAH6Q9C0G6 4158 aa2.44□□□□□ -2.02
ANKRD28-202ENST00000412318 UBR4Q5T4S7 5183 aa2.44□□□□□ -2.02
ANKRD28-202ENST00000412318 DNAH11Q96DT5 4516 aa2.43□□□□□ -2.02
ANKRD28-202ENST00000412318 PLECQ15149 4684 aaKnown RBP2.43□□□□□ -2.02
ANKRD28-202ENST00000412318 KRTAP1-4P0C5Y4 121 aa2.42□□□□□ -2.02
ANKRD28-202ENST00000412318 KRTAP4-5Q9BYR2 181 aa2.42□□□□□ -2.02
ANKRD28-202ENST00000412318 HUWE1Q7Z6Z7 4374 aaKnown RBP2.42□□□□□ -2.02
ANKRD28-202ENST00000412318 KMT2AQ03164 3969 aa2.4□□□□□ -2.02
ANKRD28-202ENST00000412318 FAT2Q9NYQ8 4349 aa2.4□□□□□ -2.03
ANKRD28-202ENST00000412318 TPRXLQ17RH7 258 aa2.39□□□□□ -2.03
ANKRD28-202ENST00000412318 COL7A1Q02388 2944 aa2.38□□□□□ -2.03
ANKRD28-202ENST00000412318 DNAH17Q9UFH2 4485 aa2.38□□□□□ -2.03
ANKRD28-202ENST00000412318 LCE2AQ5TA79 106 aaPredicted RBP2.38□□□□□ -2.03
ANKRD28-202ENST00000412318 LRP1BQ9NZR2 4599 aa2.37□□□□□ -2.03
ANKRD28-202ENST00000412318 KRTAP10-8P60410 259 aa2.37□□□□□ -2.03
ANKRD28-202ENST00000412318 XP32Q5T750 250 aa2.37□□□□□ -2.03
ANKRD28-202ENST00000412318 PRO2289Q9P1D8 64 aa2.35□□□□□ -2.03
ANKRD28-202ENST00000412318 STARD9Q9P2P6 4700 aa2.35□□□□□ -2.03
ANKRD28-202ENST00000412318 H0YAA0 97 aa2.35□□□□□ -2.03
ANKRD28-202ENST00000412318 INE1O15225 51 aa2.35□□□□□ -2.03
ANKRD28-202ENST00000412318 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
ANKRD28-202ENST00000412318 DNAH2Q9P225 4427 aa2.34□□□□□ -2.04
ANKRD28-202ENST00000412318 HERC1Q15751 4861 aa2.34□□□□□ -2.04
ANKRD28-202ENST00000412318 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
ANKRD28-202ENST00000412318 HSPG2P98160 4391 aa2.32□□□□□ -2.04
ANKRD28-202ENST00000412318 LCE2CQ5TA81 110 aa2.3□□□□□ -2.04
ANKRD28-202ENST00000412318 HMCN2Q8NDA2 5059 aa2.29□□□□□ -2.04
ANKRD28-202ENST00000412318 VPS13BQ7Z7G8 4022 aa2.29□□□□□ -2.04
ANKRD28-202ENST00000412318 VPS13DQ5THJ4 4388 aa2.29□□□□□ -2.04
ANKRD28-202ENST00000412318 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
ANKRD28-202ENST00000412318 MYCBP2O75592 4640 aa2.27□□□□□ -2.05
ANKRD28-202ENST00000412318 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
ANKRD28-202ENST00000412318 FRAS1Q86XX4 4008 aa2.26□□□□□ -2.05
ANKRD28-202ENST00000412318 FAT4Q6V0I7 4981 aa2.25□□□□□ -2.05
ANKRD28-202ENST00000412318 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
ANKRD28-202ENST00000412318 CSMD3Q7Z407 3707 aa2.24□□□□□ -2.05
ANKRD28-202ENST00000412318 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
ANKRD28-202ENST00000412318 PKD1P98161 4303 aa2.22□□□□□ -2.05
ANKRD28-202ENST00000412318 MT1HL1P0DM35 61 aa2.22□□□□□ -2.05
ANKRD28-202ENST00000412318 KRTAP15-1Q3LI76 137 aa2.22□□□□□ -2.05
ANKRD28-202ENST00000412318 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
ANKRD28-202ENST00000412318 LORP23490 312 aaPredicted RBP2.22□□□□□ -2.05
ANKRD28-202ENST00000412318 KRTAP9-7A8MTY7 169 aa2.21□□□□□ -2.06
ANKRD28-202ENST00000412318 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
ANKRD28-202ENST00000412318 RNF213Q63HN8 5207 aa2.2□□□□□ -2.06
ANKRD28-202ENST00000412318 KRTAP12-2P59991 146 aa2.18□□□□□ -2.06
ANKRD28-202ENST00000412318 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
ANKRD28-202ENST00000412318 MUC2Q02817 5179 aa2.16□□□□□ -2.06
ANKRD28-202ENST00000412318 DNAH5Q8TE73 4624 aa2.15□□□□□ -2.07
ANKRD28-202ENST00000412318 LOC100996750A0A140TA64 210 aa2.15□□□□□ -2.07
ANKRD28-202ENST00000412318 KRTAP4-6Q9BYQ5 205 aa2.15□□□□□ -2.07
ANKRD28-202ENST00000412318 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
ANKRD28-202ENST00000412318 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.13□□□□□ -2.07
ANKRD28-202ENST00000412318 FAT1Q14517 4588 aa2.1□□□□□ -2.07
ANKRD28-202ENST00000412318 KRTAP3-1Q9BYR8 98 aa2.1□□□□□ -2.07
ANKRD28-202ENST00000412318 TNXBP22105 4242 aa2.09□□□□□ -2.08
ANKRD28-202ENST00000412318 DNAH8Q96JB1 4490 aa2.08□□□□□ -2.08
ANKRD28-202ENST00000412318 KRTAP10-6P60371 365 aaPredicted RBP2.06□□□□□ -2.08
ANKRD28-202ENST00000412318 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
ANKRD28-202ENST00000412318 LRP2P98164 4655 aa1.98□□□□□ -2.09
ANKRD28-202ENST00000412318 MUC17Q685J3 4493 aa1.96□□□□□ -2.1
ANKRD28-202ENST00000412318 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
ANKRD28-202ENST00000412318 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
ANKRD28-202ENST00000412318 KRTAP4-1Q9BYQ7 146 aa1.92□□□□□ -2.1
ANKRD28-202ENST00000412318 MT1HP80294 61 aa1.92□□□□□ -2.1
ANKRD28-202ENST00000412318 LRP1Q07954 4544 aaKnown RBP1.92□□□□□ -2.1
ANKRD28-202ENST00000412318 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
ANKRD28-202ENST00000412318 KRTAP10-12P60413 245 aa1.9□□□□□ -2.11
ANKRD28-202ENST00000412318 KRTAP4-8Q9BYQ9 185 aa1.89□□□□□ -2.11
ANKRD28-202ENST00000412318 NEBP20929 6669 aa1.89□□□□□ -2.11
ANKRD28-202ENST00000412318 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
ANKRD28-202ENST00000412318 KRTAP19-4Q3LI73 84 aa1.87□□□□□ -2.11
ANKRD28-202ENST00000412318 MT2AP02795 61 aa1.86□□□□□ -2.11
ANKRD28-202ENST00000412318 KRTAP10-5P60370 271 aa1.85□□□□□ -2.11
ANKRD28-202ENST00000412318 KRTAP8-1Q8IUC2 63 aa1.84□□□□□ -2.11
ANKRD28-202ENST00000412318 MT3P25713 68 aa1.84□□□□□ -2.12
ANKRD28-202ENST00000412318 KRTAP9-9Q9BYP9 154 aa1.83□□□□□ -2.12
ANKRD28-202ENST00000412318 KRTAP9-4Q9BYQ2 154 aa1.83□□□□□ -2.12
ANKRD28-202ENST00000412318 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
ANKRD28-202ENST00000412318 KRTAP2-4Q9BYR9 128 aa1.83□□□□□ -2.12
ANKRD28-202ENST00000412318 USH2AO75445 5202 aa1.82□□□□□ -2.12
ANKRD28-202ENST00000412318 KRTAP19-1Q8IUB9 90 aa1.82□□□□□ -2.12
ANKRD28-202ENST00000412318 MT1FP04733 61 aa1.82□□□□□ -2.12
ANKRD28-202ENST00000412318 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
ANKRD28-202ENST00000412318 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
ANKRD28-202ENST00000412318 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
ANKRD28-202ENST00000412318 LCE3AQ5TA76 89 aa1.79□□□□□ -2.12
ANKRD28-202ENST00000412318 FSIP2Q5CZC0 6907 aa1.78□□□□□ -2.12
ANKRD28-202ENST00000412318 KRTAP4-8A0A0G2JLE6 195 aa1.77□□□□□ -2.13
ANKRD28-202ENST00000412318 LPAP08519 4548 aa1.76□□□□□ -2.13
ANKRD28-202ENST00000412318 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms