RNA–Protein interactions for RNA: ENST00000410411.1

RN7SKP139-201, Transcript of RNA, 7SK small nuclear pseudogene 139, humanhuman

BASIC

Gene RN7SKP139, Length 293 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP139-201ENST00000410411 TPRXLQ17RH7 258 aa4.44□□□□□ -1.7
RN7SKP139-201ENST00000410411 H1FX-AS1Q4G0G2 97 aa4.44□□□□□ -1.7
RN7SKP139-201ENST00000410411 FAT3Q8TDW7 4589 aa4.43□□□□□ -1.7
RN7SKP139-201ENST00000410411 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
RN7SKP139-201ENST00000410411 MT1HL1P0DM35 61 aa4.4□□□□□ -1.71
RN7SKP139-201ENST00000410411 HSPG2P98160 4391 aa4.39□□□□□ -1.71
RN7SKP139-201ENST00000410411 KMT2CQ8NEZ4 4911 aaKnown RBP4.39□□□□□ -1.71
RN7SKP139-201ENST00000410411 S4R3F8 94 aa4.39□□□□□ -1.71
RN7SKP139-201ENST00000410411 DMBT1Q9UGM3 2413 aaPredicted RBP4.38□□□□□ -1.71
RN7SKP139-201ENST00000410411 H0YAA0 97 aa4.36□□□□□ -1.71
RN7SKP139-201ENST00000410411 RYR1P21817 5038 aa4.34□□□□□ -1.71
RN7SKP139-201ENST00000410411 LRP1Q07954 4544 aaKnown RBP4.32□□□□□ -1.72
RN7SKP139-201ENST00000410411 SEC61BP60468 96 aaKnown RBP4.31□□□□□ -1.72
RN7SKP139-201ENST00000410411 CSAG1Q6PB30 78 aa4.31□□□□□ -1.72
RN7SKP139-201ENST00000410411 KRTAP10-6P60371 365 aaPredicted RBP4.28□□□□□ -1.72
RN7SKP139-201ENST00000410411 M0QZ58 72 aa4.27□□□□□ -1.73
RN7SKP139-201ENST00000410411 RYR3Q15413 4870 aa4.25□□□□□ -1.73
RN7SKP139-201ENST00000410411 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
RN7SKP139-201ENST00000410411 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
RN7SKP139-201ENST00000410411 KRTAP17-1Q9BYP8 105 aa4.22□□□□□ -1.73
RN7SKP139-201ENST00000410411 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
RN7SKP139-201ENST00000410411 ROMO1P60602 79 aa4.21□□□□□ -1.74
RN7SKP139-201ENST00000410411 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
RN7SKP139-201ENST00000410411 MYCBP2O75592 4640 aa4.21□□□□□ -1.74
RN7SKP139-201ENST00000410411 ADM2Q7Z4H4 148 aa4.19□□□□□ -1.74
RN7SKP139-201ENST00000410411 KIAA1109Q2LD37 5005 aa4.19□□□□□ -1.74
RN7SKP139-201ENST00000410411 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
RN7SKP139-201ENST00000410411 P0C880 135 aa4.16□□□□□ -1.74
RN7SKP139-201ENST00000410411 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
RN7SKP139-201ENST00000410411 A0A0D9SG42 100 aa4.12□□□□□ -1.75
RN7SKP139-201ENST00000410411 KRTAP4-5Q9BYR2 181 aa4.09□□□□□ -1.75
RN7SKP139-201ENST00000410411 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
RN7SKP139-201ENST00000410411 LRP2P98164 4655 aa4.09□□□□□ -1.75
RN7SKP139-201ENST00000410411 R4GN34 69 aa4.08□□□□□ -1.76
RN7SKP139-201ENST00000410411 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
RN7SKP139-201ENST00000410411 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
RN7SKP139-201ENST00000410411 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
RN7SKP139-201ENST00000410411 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
RN7SKP139-201ENST00000410411 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
RN7SKP139-201ENST00000410411 LPAP08519 4548 aa3.96□□□□□ -1.77
RN7SKP139-201ENST00000410411 ABCA13Q86UQ4 5058 aa3.96□□□□□ -1.78
RN7SKP139-201ENST00000410411 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
RN7SKP139-201ENST00000410411 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
RN7SKP139-201ENST00000410411 HERC2O95714 4834 aa3.94□□□□□ -1.78
RN7SKP139-201ENST00000410411 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
RN7SKP139-201ENST00000410411 FLGP20930 4061 aaPredicted RBP3.9□□□□□ -1.78
RN7SKP139-201ENST00000410411 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
RN7SKP139-201ENST00000410411 BIRC6Q9NR09 4857 aa3.89□□□□□ -1.79
RN7SKP139-201ENST00000410411 CAMK2N1Q7Z7J9 78 aa3.86□□□□□ -1.79
RN7SKP139-201ENST00000410411 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
RN7SKP139-201ENST00000410411 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
RN7SKP139-201ENST00000410411 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
RN7SKP139-201ENST00000410411 KRTAP9-6A0A140TA67 174 aa3.79□□□□□ -1.8
RN7SKP139-201ENST00000410411 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
RN7SKP139-201ENST00000410411 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
RN7SKP139-201ENST00000410411 TNP1P09430 55 aa3.76□□□□□ -1.81
RN7SKP139-201ENST00000410411 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
RN7SKP139-201ENST00000410411 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
RN7SKP139-201ENST00000410411 H3BS24 57 aa3.75□□□□□ -1.81
RN7SKP139-201ENST00000410411 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
RN7SKP139-201ENST00000410411 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
RN7SKP139-201ENST00000410411 HERC1Q15751 4861 aa3.73□□□□□ -1.81
RN7SKP139-201ENST00000410411 M0R2T5 61 aa3.73□□□□□ -1.81
RN7SKP139-201ENST00000410411 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
RN7SKP139-201ENST00000410411 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
RN7SKP139-201ENST00000410411 MT1HP80294 61 aa3.67□□□□□ -1.82
RN7SKP139-201ENST00000410411 PCLOQ9Y6V0 5065 aa3.64□□□□□ -1.83
RN7SKP139-201ENST00000410411 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
RN7SKP139-201ENST00000410411 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
RN7SKP139-201ENST00000410411 MUC2Q02817 5179 aa3.62□□□□□ -1.83
RN7SKP139-201ENST00000410411 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
RN7SKP139-201ENST00000410411 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
RN7SKP139-201ENST00000410411 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
RN7SKP139-201ENST00000410411 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
RN7SKP139-201ENST00000410411 MT2AP02795 61 aa3.59□□□□□ -1.83
RN7SKP139-201ENST00000410411 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.83
RN7SKP139-201ENST00000410411 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
RN7SKP139-201ENST00000410411 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
RN7SKP139-201ENST00000410411 MT1FP04733 61 aa3.54□□□□□ -1.84
RN7SKP139-201ENST00000410411 RNF213Q63HN8 5207 aa3.53□□□□□ -1.84
RN7SKP139-201ENST00000410411 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
RN7SKP139-201ENST00000410411 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
RN7SKP139-201ENST00000410411 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
RN7SKP139-201ENST00000410411 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
RN7SKP139-201ENST00000410411 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
RN7SKP139-201ENST00000410411 FAT4Q6V0I7 4981 aa3.45□□□□□ -1.86
RN7SKP139-201ENST00000410411 MT1BP07438 61 aa3.45□□□□□ -1.86
RN7SKP139-201ENST00000410411 KRTAP9-3Q9BYQ3 159 aa3.45□□□□□ -1.86
RN7SKP139-201ENST00000410411 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
RN7SKP139-201ENST00000410411 MT1XP80297 61 aa3.41□□□□□ -1.86
RN7SKP139-201ENST00000410411 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
RN7SKP139-201ENST00000410411 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
RN7SKP139-201ENST00000410411 UBR4Q5T4S7 5183 aa3.39□□□□□ -1.87
RN7SKP139-201ENST00000410411 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
RN7SKP139-201ENST00000410411 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
RN7SKP139-201ENST00000410411 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
RN7SKP139-201ENST00000410411 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
RN7SKP139-201ENST00000410411 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
RN7SKP139-201ENST00000410411 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
RN7SKP139-201ENST00000410411 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms