RNA–Protein interactions for RNA: ENST00000409751.1

RAB1A-202, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB1A, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-202ENST00000409751 SNURFQ9Y675 71 aa10.13□□□□□ -0.79
RAB1A-202ENST00000409751 C20orf197Q8N268 126 aa10.09□□□□□ -0.79
RAB1A-202ENST00000409751 NDUFC1O43677 76 aa10.04□□□□□ -0.8
RAB1A-202ENST00000409751 DMAC1Q96GE9 116 aa10.03□□□□□ -0.8
RAB1A-202ENST00000409751 COX7CP15954 63 aa9.97□□□□□ -0.81
RAB1A-202ENST00000409751 KRTAP9-3Q9BYQ3 159 aa9.94□□□□□ -0.82
RAB1A-202ENST00000409751 ANAPC13Q9BS18 74 aa9.91□□□□□ -0.82
RAB1A-202ENST00000409751 ACYP2P14621 99 aa9.9□□□□□ -0.82
RAB1A-202ENST00000409751 SPANXA2-OT1Q8N9U9 137 aa9.84□□□□□ -0.83
RAB1A-202ENST00000409751 LCE2BO14633 110 aa9.82□□□□□ -0.84
RAB1A-202ENST00000409751 FSIP2Q5CZC0 6907 aa9.8□□□□□ -0.84
RAB1A-202ENST00000409751 CHKB-CPT1BH3BT56 60 aa9.8□□□□□ -0.84
RAB1A-202ENST00000409751 KRTAP9-6A0A140TA67 174 aa9.79□□□□□ -0.84
RAB1A-202ENST00000409751 CRCT1Q9UGL9 99 aa9.79□□□□□ -0.84
RAB1A-202ENST00000409751 USH2AO75445 5202 aa9.76□□□□□ -0.85
RAB1A-202ENST00000409751 ADM2Q7Z4H4 148 aa9.75□□□□□ -0.85
RAB1A-202ENST00000409751 CYSTM1Q9H1C7 97 aa9.75□□□□□ -0.85
RAB1A-202ENST00000409751 H0YAA0 97 aa9.74□□□□□ -0.85
RAB1A-202ENST00000409751 SPTSSBQ8NFR3 76 aa9.72□□□□□ -0.85
RAB1A-202ENST00000409751 H7BZZ5 65 aa9.7□□□□□ -0.86
RAB1A-202ENST00000409751 CCDC179H3BU77 68 aa9.68□□□□□ -0.86
RAB1A-202ENST00000409751 KRTAP19-1Q8IUB9 90 aa9.64□□□□□ -0.87
RAB1A-202ENST00000409751 CRIPTQ9P021 101 aa9.62□□□□□ -0.87
RAB1A-202ENST00000409751 COA5Q86WW8 74 aa9.6□□□□□ -0.87
RAB1A-202ENST00000409751 SPRR2GQ9BYE4 73 aa9.58□□□□□ -0.88
RAB1A-202ENST00000409751 P0C880 135 aa9.56□□□□□ -0.88
RAB1A-202ENST00000409751 SSPOA2VEC9 5147 aa9.55□□□□□ -0.88
RAB1A-202ENST00000409751 Q5VV11 94 aa9.5□□□□□ -0.89
RAB1A-202ENST00000409751 R4GN34 69 aa9.48□□□□□ -0.89
RAB1A-202ENST00000409751 KRTAP19-8Q3LI54 63 aa9.45□□□□□ -0.9
RAB1A-202ENST00000409751 M0QZ58 72 aa9.43□□□□□ -0.9
RAB1A-202ENST00000409751 MT1BP07438 61 aa9.41□□□□□ -0.9
RAB1A-202ENST00000409751 ATP5EP56381 51 aaPredicted RBP9.39□□□□□ -0.91
RAB1A-202ENST00000409751 KRTAP19-6Q3LI70 58 aa9.37□□□□□ -0.91
RAB1A-202ENST00000409751 TMEM258P61165 79 aa9.31□□□□□ -0.92
RAB1A-202ENST00000409751 LINC01554Q52M75 96 aa9.31□□□□□ -0.92
RAB1A-202ENST00000409751 SEC61GP60059 68 aa9.31□□□□□ -0.92
RAB1A-202ENST00000409751 FCGBPQ9Y6R7 5405 aaPredicted RBP9.27□□□□□ -0.93
RAB1A-202ENST00000409751 SERP1Q9Y6X1 66 aa9.27□□□□□ -0.93
RAB1A-202ENST00000409751 PLAC4Q8WY50 150 aa9.21□□□□□ -0.94
RAB1A-202ENST00000409751 A6NN06 94 aa9.2□□□□□ -0.94
RAB1A-202ENST00000409751 A0A1B0GU69 56 aa9.13□□□□□ -0.95
RAB1A-202ENST00000409751 KRTAP10-5P60370 271 aa9.1□□□□□ -0.95
RAB1A-202ENST00000409751 KRTAP13-4Q3LI77 160 aa9.1□□□□□ -0.95
RAB1A-202ENST00000409751 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
RAB1A-202ENST00000409751 A0A1B0GU33 70 aa9.05□□□□□ -0.96
RAB1A-202ENST00000409751 PCP4P48539 62 aa9.04□□□□□ -0.96
RAB1A-202ENST00000409751 SPATA8Q6RVD6 105 aa9□□□□□ -0.97
RAB1A-202ENST00000409751 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
RAB1A-202ENST00000409751 PRO2289Q9P1D8 64 aa8.99□□□□□ -0.97
RAB1A-202ENST00000409751 A0A0D9SG42 100 aa8.96□□□□□ -0.98
RAB1A-202ENST00000409751 LINC01558Q9Y6Z2 57 aa8.95□□□□□ -0.98
RAB1A-202ENST00000409751 MT1XP80297 61 aa8.94□□□□□ -0.98
RAB1A-202ENST00000409751 MACF1Q9UPN3 7388 aaKnown RBP8.91□□□□□ -0.98
RAB1A-202ENST00000409751 KRTAP9-7A8MTY7 169 aa8.85□□□□□ -0.99
RAB1A-202ENST00000409751 SPINT4Q6UDR6 99 aa8.81□□□□□ -1
RAB1A-202ENST00000409751 CAMK2N1Q7Z7J9 78 aa8.81□□□□□ -1
RAB1A-202ENST00000409751 SMIM26A0A096LP01 95 aa8.8□□□□□ -1
RAB1A-202ENST00000409751 A8MU10 97 aa8.76□□□□□ -1.01
RAB1A-202ENST00000409751 SYNE2Q8WXH0 6885 aaKnown RBP8.75□□□□□ -1.01
RAB1A-202ENST00000409751 V9GYY9 64 aa8.73□□□□□ -1.01
RAB1A-202ENST00000409751 KRTAP12-1P59990 96 aa8.71□□□□□ -1.02
RAB1A-202ENST00000409751 UQCR11O14957 56 aa8.68□□□□□ -1.02
RAB1A-202ENST00000409751 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
RAB1A-202ENST00000409751 PSPHP1O15172 72 aa8.66□□□□□ -1.02
RAB1A-202ENST00000409751 Q1T7F1 81 aa8.66□□□□□ -1.02
RAB1A-202ENST00000409751 KRTAP6-3Q3LI67 103 aa8.61□□□□□ -1.03
RAB1A-202ENST00000409751 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
RAB1A-202ENST00000409751 KRTAP10-7P60409 375 aaPredicted RBP8.57□□□□□ -1.04
RAB1A-202ENST00000409751 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
RAB1A-202ENST00000409751 KMT2DO14686 5537 aa8.51□□□□□ -1.05
RAB1A-202ENST00000409751 KRTAP10-12P60413 245 aa8.48□□□□□ -1.05
RAB1A-202ENST00000409751 KRTAP8-1Q8IUC2 63 aa8.46□□□□□ -1.06
RAB1A-202ENST00000409751 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
RAB1A-202ENST00000409751 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
RAB1A-202ENST00000409751 A6NED7 52 aa8.4□□□□□ -1.06
RAB1A-202ENST00000409751 KRTAP5-9P26371 169 aa8.38□□□□□ -1.07
RAB1A-202ENST00000409751 SPRR2FQ96RM1 72 aa8.35□□□□□ -1.07
RAB1A-202ENST00000409751 K7ERS5 55 aa8.32□□□□□ -1.08
RAB1A-202ENST00000409751 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
RAB1A-202ENST00000409751 MUC12Q9UKN1 5478 aa8.26□□□□□ -1.09
RAB1A-202ENST00000409751 TNP1P09430 55 aa8.2□□□□□ -1.1
RAB1A-202ENST00000409751 NEBP20929 6669 aa8.14□□□□□ -1.11
RAB1A-202ENST00000409751 SPRR2EP22531 72 aa8.12□□□□□ -1.11
RAB1A-202ENST00000409751 SPRR2BP35325 72 aa8.12□□□□□ -1.11
RAB1A-202ENST00000409751 SPRR2AP35326 72 aa8.12□□□□□ -1.11
RAB1A-202ENST00000409751 MDN1Q9NU22 5596 aa8.11□□□□□ -1.11
RAB1A-202ENST00000409751 CDC42SE1Q9NRR8 79 aa8.07□□□□□ -1.12
RAB1A-202ENST00000409751 LCE1AQ5T7P2 110 aa8.01□□□□□ -1.13
RAB1A-202ENST00000409751 LCE3AQ5TA76 89 aa8.01□□□□□ -1.13
RAB1A-202ENST00000409751 KRTAP19-7Q3SYF9 63 aa7.97□□□□□ -1.13
RAB1A-202ENST00000409751 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
RAB1A-202ENST00000409751 KRTAP19-5Q3LI72 72 aa7.94□□□□□ -1.14
RAB1A-202ENST00000409751 MT1EP04732 61 aa7.9□□□□□ -1.14
RAB1A-202ENST00000409751 SPRR2DP22532 72 aa7.84□□□□□ -1.15
RAB1A-202ENST00000409751 KRTAP20-1Q3LI63 56 aa7.82□□□□□ -1.16
RAB1A-202ENST00000409751 SVIPQ8NHG7 77 aa7.81□□□□□ -1.16
RAB1A-202ENST00000409751 ROMO1P60602 79 aa7.8□□□□□ -1.16
RAB1A-202ENST00000409751 KRTAP19-3Q7Z4W3 81 aa7.75□□□□□ -1.17
RAB1A-202ENST00000409751 BRK1Q8WUW1 75 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms