RNA–Protein interactions for RNA: ENST00000409573.6

ZC3H8-202, Transcript of zinc finger CCCH-type containing 8, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZC3H8, Length 5,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8-202ENST00000409573 LINC00472Q9H8W2 130 aa4.17□□□□□ -1.74
ZC3H8-202ENST00000409573 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
ZC3H8-202ENST00000409573 P0C880 135 aa4.16□□□□□ -1.74
ZC3H8-202ENST00000409573 PKD1P98161 4303 aa4.16□□□□□ -1.74
ZC3H8-202ENST00000409573 KRTAP10-4P60372 401 aaPredicted RBP4.15□□□□□ -1.75
ZC3H8-202ENST00000409573 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
ZC3H8-202ENST00000409573 Q96NJ1 140 aa4.14□□□□□ -1.75
ZC3H8-202ENST00000409573 HERC2O95714 4834 aa4.13□□□□□ -1.75
ZC3H8-202ENST00000409573 VPS13BQ7Z7G8 4022 aa4.12□□□□□ -1.75
ZC3H8-202ENST00000409573 KRTAP17-1Q9BYP8 105 aa4.12□□□□□ -1.75
ZC3H8-202ENST00000409573 ABCA13Q86UQ4 5058 aa4.12□□□□□ -1.75
ZC3H8-202ENST00000409573 KRTAP4-5Q9BYR2 181 aa4.1□□□□□ -1.75
ZC3H8-202ENST00000409573 PP632Q6XCG6 107 aa4.09□□□□□ -1.76
ZC3H8-202ENST00000409573 BIRC6Q9NR09 4857 aa4.08□□□□□ -1.76
ZC3H8-202ENST00000409573 C9orf92A6NGG3 77 aa4.08□□□□□ -1.76
ZC3H8-202ENST00000409573 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
ZC3H8-202ENST00000409573 MMP24-AS1A0A0U1RRL7 71 aa4.07□□□□□ -1.76
ZC3H8-202ENST00000409573 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
ZC3H8-202ENST00000409573 PCLOQ9Y6V0 5065 aa4.04□□□□□ -1.76
ZC3H8-202ENST00000409573 KRTAP10-8P60410 259 aa4.03□□□□□ -1.76
ZC3H8-202ENST00000409573 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
ZC3H8-202ENST00000409573 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
ZC3H8-202ENST00000409573 KRTAP3-2Q9BYR7 98 aa4.02□□□□□ -1.77
ZC3H8-202ENST00000409573 HSPG2P98160 4391 aa4.02□□□□□ -1.77
ZC3H8-202ENST00000409573 MT1HL1P0DM35 61 aa4□□□□□ -1.77
ZC3H8-202ENST00000409573 RPL37P61927 97 aaKnown RBP3.98□□□□□ -1.77
ZC3H8-202ENST00000409573 INE1O15225 51 aa3.98□□□□□ -1.77
ZC3H8-202ENST00000409573 RPS29P62273 56 aaKnown RBP3.97□□□□□ -1.77
ZC3H8-202ENST00000409573 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
ZC3H8-202ENST00000409573 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.78
ZC3H8-202ENST00000409573 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
ZC3H8-202ENST00000409573 HERC1Q15751 4861 aa3.95□□□□□ -1.78
ZC3H8-202ENST00000409573 LRP2P98164 4655 aa3.93□□□□□ -1.78
ZC3H8-202ENST00000409573 RNF213Q63HN8 5207 aa3.89□□□□□ -1.79
ZC3H8-202ENST00000409573 A0A0D9SG42 100 aa3.89□□□□□ -1.79
ZC3H8-202ENST00000409573 KRTAP13-3Q3SY46 172 aa3.87□□□□□ -1.79
ZC3H8-202ENST00000409573 XP32Q5T750 250 aa3.86□□□□□ -1.79
ZC3H8-202ENST00000409573 UBR4Q5T4S7 5183 aa3.86□□□□□ -1.79
ZC3H8-202ENST00000409573 MUC2Q02817 5179 aa3.81□□□□□ -1.8
ZC3H8-202ENST00000409573 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
ZC3H8-202ENST00000409573 PKHD1L1Q86WI1 4243 aa3.8□□□□□ -1.8
ZC3H8-202ENST00000409573 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
ZC3H8-202ENST00000409573 LPAP08519 4548 aa3.74□□□□□ -1.81
ZC3H8-202ENST00000409573 TNXBP22105 4242 aa3.74□□□□□ -1.81
ZC3H8-202ENST00000409573 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
ZC3H8-202ENST00000409573 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
ZC3H8-202ENST00000409573 H0YAA0 97 aa3.68□□□□□ -1.82
ZC3H8-202ENST00000409573 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
ZC3H8-202ENST00000409573 KRTAP4-1Q9BYQ7 146 aa3.64□□□□□ -1.83
ZC3H8-202ENST00000409573 S4R3F8 94 aa3.6□□□□□ -1.83
ZC3H8-202ENST00000409573 M0R2T5 61 aa3.56□□□□□ -1.84
ZC3H8-202ENST00000409573 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
ZC3H8-202ENST00000409573 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
ZC3H8-202ENST00000409573 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
ZC3H8-202ENST00000409573 M0QZ58 72 aa3.44□□□□□ -1.86
ZC3H8-202ENST00000409573 KRTAP19-2Q3LHN2 52 aa3.42□□□□□ -1.86
ZC3H8-202ENST00000409573 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
ZC3H8-202ENST00000409573 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.86
ZC3H8-202ENST00000409573 LCE2CQ5TA81 110 aa3.4□□□□□ -1.87
ZC3H8-202ENST00000409573 LCE2DQ5TA82 110 aaPredicted RBP3.37□□□□□ -1.87
ZC3H8-202ENST00000409573 MT1HP80294 61 aa3.35□□□□□ -1.87
ZC3H8-202ENST00000409573 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
ZC3H8-202ENST00000409573 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
ZC3H8-202ENST00000409573 LORP23490 312 aaPredicted RBP3.34□□□□□ -1.87
ZC3H8-202ENST00000409573 FLGP20930 4061 aaPredicted RBP3.33□□□□□ -1.88
ZC3H8-202ENST00000409573 USH2AO75445 5202 aa3.31□□□□□ -1.88
ZC3H8-202ENST00000409573 TNP1P09430 55 aa3.28□□□□□ -1.88
ZC3H8-202ENST00000409573 MT2AP02795 61 aa3.26□□□□□ -1.89
ZC3H8-202ENST00000409573 MT1FP04733 61 aa3.25□□□□□ -1.89
ZC3H8-202ENST00000409573 LCE2AQ5TA79 106 aaPredicted RBP3.22□□□□□ -1.89
ZC3H8-202ENST00000409573 KRTAP9-8Q9BYQ0 159 aa3.22□□□□□ -1.89
ZC3H8-202ENST00000409573 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
ZC3H8-202ENST00000409573 LCE2BO14633 110 aa3.18□□□□□ -1.9
ZC3H8-202ENST00000409573 MT3P25713 68 aa3.17□□□□□ -1.9
ZC3H8-202ENST00000409573 KRTAP19-1Q8IUB9 90 aa3.17□□□□□ -1.9
ZC3H8-202ENST00000409573 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
ZC3H8-202ENST00000409573 KRTAP9-3Q9BYQ3 159 aa3.09□□□□□ -1.91
ZC3H8-202ENST00000409573 SSPOA2VEC9 5147 aa3.09□□□□□ -1.92
ZC3H8-202ENST00000409573 MT1BP07438 61 aa3.04□□□□□ -1.92
ZC3H8-202ENST00000409573 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
ZC3H8-202ENST00000409573 KMT2DO14686 5537 aa2.96□□□□□ -1.94
ZC3H8-202ENST00000409573 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
ZC3H8-202ENST00000409573 MT1XP80297 61 aa2.93□□□□□ -1.94
ZC3H8-202ENST00000409573 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
ZC3H8-202ENST00000409573 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
ZC3H8-202ENST00000409573 KRTAP10-7P60409 375 aaPredicted RBP2.86□□□□□ -1.95
ZC3H8-202ENST00000409573 KRTAP9-2Q9BYQ4 174 aa2.86□□□□□ -1.95
ZC3H8-202ENST00000409573 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
ZC3H8-202ENST00000409573 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.95
ZC3H8-202ENST00000409573 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
ZC3H8-202ENST00000409573 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
ZC3H8-202ENST00000409573 KRTAP4-8A0A0G2JLE6 195 aa2.82□□□□□ -1.96
ZC3H8-202ENST00000409573 KRTAP4-8Q9BYQ9 185 aa2.82□□□□□ -1.96
ZC3H8-202ENST00000409573 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
ZC3H8-202ENST00000409573 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
ZC3H8-202ENST00000409573 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
ZC3H8-202ENST00000409573 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
ZC3H8-202ENST00000409573 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
ZC3H8-202ENST00000409573 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
ZC3H8-202ENST00000409573 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms