RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
CUL1-202ENST00000409469 RPS29P62273 56 aaKnown RBP5.45□□□□□ -1.54
CUL1-202ENST00000409469 HRES1P13985 223 aa5.43□□□□□ -1.54
CUL1-202ENST00000409469 ABCA13Q86UQ4 5058 aa5.43□□□□□ -1.54
CUL1-202ENST00000409469 COA5Q86WW8 74 aa5.43□□□□□ -1.54
CUL1-202ENST00000409469 KRTAP10-8P60410 259 aa5.41□□□□□ -1.54
CUL1-202ENST00000409469 KRTAP4-5Q9BYR2 181 aa5.41□□□□□ -1.54
CUL1-202ENST00000409469 MT1HL1P0DM35 61 aa5.36□□□□□ -1.55
CUL1-202ENST00000409469 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
CUL1-202ENST00000409469 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
CUL1-202ENST00000409469 LPAP08519 4548 aa5.35□□□□□ -1.55
CUL1-202ENST00000409469 DMAC1Q96GE9 116 aa5.31□□□□□ -1.56
CUL1-202ENST00000409469 LRP2P98164 4655 aa5.3□□□□□ -1.56
CUL1-202ENST00000409469 ACYP2P14621 99 aa5.29□□□□□ -1.56
CUL1-202ENST00000409469 HERC2O95714 4834 aa5.28□□□□□ -1.56
CUL1-202ENST00000409469 SPINT4Q6UDR6 99 aa5.28□□□□□ -1.56
CUL1-202ENST00000409469 XP32Q5T750 250 aa5.26□□□□□ -1.57
CUL1-202ENST00000409469 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
CUL1-202ENST00000409469 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
CUL1-202ENST00000409469 BIRC6Q9NR09 4857 aa5.2□□□□□ -1.58
CUL1-202ENST00000409469 RPL37P61927 97 aaKnown RBP5.2□□□□□ -1.58
CUL1-202ENST00000409469 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
CUL1-202ENST00000409469 PCLOQ9Y6V0 5065 aa5.18□□□□□ -1.58
CUL1-202ENST00000409469 CRIPTQ9P021 101 aa5.17□□□□□ -1.58
CUL1-202ENST00000409469 KRTAP15-1Q3LI76 137 aa5.16□□□□□ -1.58
CUL1-202ENST00000409469 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
CUL1-202ENST00000409469 HERC1Q15751 4861 aa5.13□□□□□ -1.59
CUL1-202ENST00000409469 MUC2Q02817 5179 aa5.12□□□□□ -1.59
CUL1-202ENST00000409469 A0A1B0GU69 56 aa5.11□□□□□ -1.59
CUL1-202ENST00000409469 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
CUL1-202ENST00000409469 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
CUL1-202ENST00000409469 UQCR11O14957 56 aa5.09□□□□□ -1.6
CUL1-202ENST00000409469 KRTAP3-3Q9BYR6 98 aa5.09□□□□□ -1.6
CUL1-202ENST00000409469 KRTAP3-2Q9BYR7 98 aa5.09□□□□□ -1.6
CUL1-202ENST00000409469 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
CUL1-202ENST00000409469 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
CUL1-202ENST00000409469 S4R3F8 94 aa4.97□□□□□ -1.61
CUL1-202ENST00000409469 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
CUL1-202ENST00000409469 A0A1B0GU33 70 aa4.93□□□□□ -1.62
CUL1-202ENST00000409469 H1FX-AS1Q4G0G2 97 aa4.92□□□□□ -1.62
CUL1-202ENST00000409469 H0YAA0 97 aa4.91□□□□□ -1.62
CUL1-202ENST00000409469 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
CUL1-202ENST00000409469 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
CUL1-202ENST00000409469 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
CUL1-202ENST00000409469 R4GN34 69 aa4.86□□□□□ -1.63
CUL1-202ENST00000409469 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
CUL1-202ENST00000409469 KRTAP13-4Q3LI77 160 aa4.84□□□□□ -1.63
CUL1-202ENST00000409469 LCE2CQ5TA81 110 aa4.82□□□□□ -1.64
CUL1-202ENST00000409469 A0A0D9SG42 100 aa4.81□□□□□ -1.64
CUL1-202ENST00000409469 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
CUL1-202ENST00000409469 KRTAP19-2Q3LHN2 52 aa4.79□□□□□ -1.64
CUL1-202ENST00000409469 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
CUL1-202ENST00000409469 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
CUL1-202ENST00000409469 FLGP20930 4061 aaPredicted RBP4.72□□□□□ -1.65
CUL1-202ENST00000409469 LORP23490 312 aaPredicted RBP4.71□□□□□ -1.66
CUL1-202ENST00000409469 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
CUL1-202ENST00000409469 KRTAP12-2P59991 146 aa4.65□□□□□ -1.67
CUL1-202ENST00000409469 M0QZ58 72 aa4.64□□□□□ -1.67
CUL1-202ENST00000409469 KRTAP12-1P59990 96 aa4.59□□□□□ -1.67
CUL1-202ENST00000409469 LCE2BO14633 110 aa4.56□□□□□ -1.68
CUL1-202ENST00000409469 M0R2T5 61 aa4.54□□□□□ -1.68
CUL1-202ENST00000409469 MT1HP80294 61 aa4.51□□□□□ -1.69
CUL1-202ENST00000409469 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
CUL1-202ENST00000409469 MT1FP04733 61 aa4.39□□□□□ -1.71
CUL1-202ENST00000409469 MT2AP02795 61 aa4.38□□□□□ -1.71
CUL1-202ENST00000409469 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
CUL1-202ENST00000409469 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
CUL1-202ENST00000409469 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
CUL1-202ENST00000409469 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
CUL1-202ENST00000409469 USH2AO75445 5202 aa4.29□□□□□ -1.72
CUL1-202ENST00000409469 INE1O15225 51 aa4.26□□□□□ -1.73
CUL1-202ENST00000409469 KRTAP9-3Q9BYQ3 159 aa4.18□□□□□ -1.74
CUL1-202ENST00000409469 MT1BP07438 61 aa4.16□□□□□ -1.74
CUL1-202ENST00000409469 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
CUL1-202ENST00000409469 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
CUL1-202ENST00000409469 TNP1P09430 55 aa4.11□□□□□ -1.75
CUL1-202ENST00000409469 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
CUL1-202ENST00000409469 MT1XP80297 61 aa4.08□□□□□ -1.76
CUL1-202ENST00000409469 KMT2DO14686 5537 aa4.07□□□□□ -1.76
CUL1-202ENST00000409469 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
CUL1-202ENST00000409469 LCE3AQ5TA76 89 aa4□□□□□ -1.77
CUL1-202ENST00000409469 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
CUL1-202ENST00000409469 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
CUL1-202ENST00000409469 KRTAP10-12P60413 245 aa3.9□□□□□ -1.78
CUL1-202ENST00000409469 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
CUL1-202ENST00000409469 KRTAP4-8Q9BYQ9 185 aa3.85□□□□□ -1.79
CUL1-202ENST00000409469 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
CUL1-202ENST00000409469 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
CUL1-202ENST00000409469 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
CUL1-202ENST00000409469 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
CUL1-202ENST00000409469 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
CUL1-202ENST00000409469 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
CUL1-202ENST00000409469 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
CUL1-202ENST00000409469 KRTAP19-6Q3LI70 58 aa3.68□□□□□ -1.82
CUL1-202ENST00000409469 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
CUL1-202ENST00000409469 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
CUL1-202ENST00000409469 MACF1Q9UPN3 7388 aaKnown RBP3.61□□□□□ -1.83
CUL1-202ENST00000409469 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
CUL1-202ENST00000409469 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
CUL1-202ENST00000409469 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms