RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 CYP4F30PQ9H0H9 118 aa2.22□□□□□ -2.05
LRRTM4-201ENST00000409088 LOC101927531A0A1B0GV80 90 aa2.21□□□□□ -2.06
LRRTM4-201ENST00000409088 RYR1P21817 5038 aa2.21□□□□□ -2.06
LRRTM4-201ENST00000409088 LCA10Q71F78 164 aa2.21□□□□□ -2.06
LRRTM4-201ENST00000409088 C9orf92A6NGG3 77 aa2.21□□□□□ -2.06
LRRTM4-201ENST00000409088 LINC01554Q52M75 96 aa2.21□□□□□ -2.06
LRRTM4-201ENST00000409088 KRTAP9-8Q9BYQ0 159 aa2.21□□□□□ -2.06
LRRTM4-201ENST00000409088 PKHD1L1Q86WI1 4243 aa2.21□□□□□ -2.06
LRRTM4-201ENST00000409088 IGLV7-46A0A075B6I9 117 aa2.21□□□□□ -2.06
LRRTM4-201ENST00000409088 DMBT1Q9UGM3 2413 aaPredicted RBP2.2□□□□□ -2.06
LRRTM4-201ENST00000409088 KIAA1109Q2LD37 5005 aa2.2□□□□□ -2.06
LRRTM4-201ENST00000409088 CHKB-CPT1BH3BT56 60 aa2.2□□□□□ -2.06
LRRTM4-201ENST00000409088 FP248Q71RG6 208 aaPredicted RBP2.2□□□□□ -2.06
LRRTM4-201ENST00000409088 KRTAP10-8P60410 259 aa2.19□□□□□ -2.06
LRRTM4-201ENST00000409088 IGKV2D-30A0A075B6S6 120 aa2.19□□□□□ -2.06
LRRTM4-201ENST00000409088 IGKV2-30P06310 120 aa2.19□□□□□ -2.06
LRRTM4-201ENST00000409088 SEC61BP60468 96 aaKnown RBP2.19□□□□□ -2.06
LRRTM4-201ENST00000409088 EPPK1P58107 5090 aaKnown RBP2.19□□□□□ -2.06
LRRTM4-201ENST00000409088 TNXBP22105 4242 aa2.18□□□□□ -2.06
LRRTM4-201ENST00000409088 A8MU10 97 aa2.18□□□□□ -2.06
LRRTM4-201ENST00000409088 HRES1P13985 223 aa2.18□□□□□ -2.06
LRRTM4-201ENST00000409088 COA5Q86WW8 74 aa2.18□□□□□ -2.06
LRRTM4-201ENST00000409088 C7orf65Q6ZTY9 151 aa2.17□□□□□ -2.06
LRRTM4-201ENST00000409088 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
LRRTM4-201ENST00000409088 MYCBP2O75592 4640 aa2.17□□□□□ -2.06
LRRTM4-201ENST00000409088 A8MUU9 505 aa2.16□□□□□ -2.06
LRRTM4-201ENST00000409088 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
LRRTM4-201ENST00000409088 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
LRRTM4-201ENST00000409088 MT1HL1P0DM35 61 aa2.15□□□□□ -2.07
LRRTM4-201ENST00000409088 ACYP2P14621 99 aa2.15□□□□□ -2.07
LRRTM4-201ENST00000409088 Q1T7F1 81 aa2.14□□□□□ -2.07
LRRTM4-201ENST00000409088 LCE1AQ5T7P2 110 aa2.14□□□□□ -2.07
LRRTM4-201ENST00000409088 DMAC1Q96GE9 116 aa2.14□□□□□ -2.07
LRRTM4-201ENST00000409088 SPINK7P58062 85 aa2.12□□□□□ -2.07
LRRTM4-201ENST00000409088 ATP11AUNQ6ZP68 121 aa2.12□□□□□ -2.07
LRRTM4-201ENST00000409088 PRR15LQ9BU68 103 aa2.11□□□□□ -2.07
LRRTM4-201ENST00000409088 K7ERS5 55 aa2.1□□□□□ -2.07
LRRTM4-201ENST00000409088 RPL37P61927 97 aaKnown RBP2.1□□□□□ -2.07
LRRTM4-201ENST00000409088 Q5VV11 94 aa2.1□□□□□ -2.07
LRRTM4-201ENST00000409088 LINC01558Q9Y6Z2 57 aa2.1□□□□□ -2.07
LRRTM4-201ENST00000409088 NDUFAF8A1L188 74 aa2.08□□□□□ -2.08
LRRTM4-201ENST00000409088 ABCA13Q86UQ4 5058 aa2.07□□□□□ -2.08
LRRTM4-201ENST00000409088 HERC2O95714 4834 aa2.07□□□□□ -2.08
LRRTM4-201ENST00000409088 TPRXLQ17RH7 258 aa2.07□□□□□ -2.08
LRRTM4-201ENST00000409088 COX6B2Q6YFQ2 88 aa2.07□□□□□ -2.08
LRRTM4-201ENST00000409088 MIR22HGQ0VDD5 57 aa2.06□□□□□ -2.08
LRRTM4-201ENST00000409088 LRP2P98164 4655 aa2.06□□□□□ -2.08
LRRTM4-201ENST00000409088 LPAP08519 4548 aa2.06□□□□□ -2.08
LRRTM4-201ENST00000409088 A0A1B0GU69 56 aa2.06□□□□□ -2.08
LRRTM4-201ENST00000409088 CSAG1Q6PB30 78 aa2.06□□□□□ -2.08
LRRTM4-201ENST00000409088 BIRC6Q9NR09 4857 aa2.06□□□□□ -2.08
LRRTM4-201ENST00000409088 MT3P25713 68 aa2.05□□□□□ -2.08
LRRTM4-201ENST00000409088 SPINT4Q6UDR6 99 aa2.04□□□□□ -2.08
LRRTM4-201ENST00000409088 A6NN06 94 aa2.04□□□□□ -2.08
LRRTM4-201ENST00000409088 ROMO1P60602 79 aa2.02□□□□□ -2.09
LRRTM4-201ENST00000409088 CDC42SE1Q9NRR8 79 aa2.02□□□□□ -2.09
LRRTM4-201ENST00000409088 UQCR11O14957 56 aa2□□□□□ -2.09
LRRTM4-201ENST00000409088 S4R3F8 94 aa2□□□□□ -2.09
LRRTM4-201ENST00000409088 H1FX-AS1Q4G0G2 97 aa2□□□□□ -2.09
LRRTM4-201ENST00000409088 CRIPTQ9P021 101 aa1.98□□□□□ -2.09
LRRTM4-201ENST00000409088 SPATA8Q6RVD6 105 aa1.98□□□□□ -2.09
LRRTM4-201ENST00000409088 A0A1B0GU33 70 aa1.98□□□□□ -2.09
LRRTM4-201ENST00000409088 HERC1Q15751 4861 aa1.97□□□□□ -2.09
LRRTM4-201ENST00000409088 KRTAP4-1Q9BYQ7 146 aa1.97□□□□□ -2.09
LRRTM4-201ENST00000409088 PCLOQ9Y6V0 5065 aa1.97□□□□□ -2.09
LRRTM4-201ENST00000409088 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
LRRTM4-201ENST00000409088 MUC17Q685J3 4493 aa1.96□□□□□ -2.1
LRRTM4-201ENST00000409088 H0YAA0 97 aa1.95□□□□□ -2.1
LRRTM4-201ENST00000409088 KRTAP10-6P60371 365 aaPredicted RBP1.95□□□□□ -2.1
LRRTM4-201ENST00000409088 P0C880 135 aa1.94□□□□□ -2.1
LRRTM4-201ENST00000409088 MUC2Q02817 5179 aa1.94□□□□□ -2.1
LRRTM4-201ENST00000409088 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
LRRTM4-201ENST00000409088 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
LRRTM4-201ENST00000409088 HMCN2Q8NDA2 5059 aa1.93□□□□□ -2.1
LRRTM4-201ENST00000409088 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
LRRTM4-201ENST00000409088 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
LRRTM4-201ENST00000409088 A0A0D9SG42 100 aa1.91□□□□□ -2.1
LRRTM4-201ENST00000409088 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
LRRTM4-201ENST00000409088 KRTAP19-2Q3LHN2 52 aa1.91□□□□□ -2.1
LRRTM4-201ENST00000409088 KRTAP2-2Q9BYT5 123 aa1.89□□□□□ -2.11
LRRTM4-201ENST00000409088 CAMK2N1Q7Z7J9 78 aa1.88□□□□□ -2.11
LRRTM4-201ENST00000409088 FLGP20930 4061 aaPredicted RBP1.88□□□□□ -2.11
LRRTM4-201ENST00000409088 M0QZ58 72 aa1.87□□□□□ -2.11
LRRTM4-201ENST00000409088 R4GN34 69 aa1.86□□□□□ -2.11
LRRTM4-201ENST00000409088 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
LRRTM4-201ENST00000409088 UBR4Q5T4S7 5183 aa1.86□□□□□ -2.11
LRRTM4-201ENST00000409088 KRTAP12-2P59991 146 aa1.85□□□□□ -2.11
LRRTM4-201ENST00000409088 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
LRRTM4-201ENST00000409088 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.12
LRRTM4-201ENST00000409088 KRTAP12-1P59990 96 aa1.84□□□□□ -2.12
LRRTM4-201ENST00000409088 M0R2T5 61 aa1.83□□□□□ -2.12
LRRTM4-201ENST00000409088 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
LRRTM4-201ENST00000409088 MT1HP80294 61 aa1.8□□□□□ -2.12
LRRTM4-201ENST00000409088 KRTAP10-7P60409 375 aaPredicted RBP1.8□□□□□ -2.12
LRRTM4-201ENST00000409088 KRTAP10-10P60014 251 aa1.76□□□□□ -2.13
LRRTM4-201ENST00000409088 C10orf95Q9H7T3 257 aa1.76□□□□□ -2.13
LRRTM4-201ENST00000409088 MT2AP02795 61 aa1.75□□□□□ -2.13
LRRTM4-201ENST00000409088 MT1FP04733 61 aa1.75□□□□□ -2.13
LRRTM4-201ENST00000409088 SPRR2GQ9BYE4 73 aa1.73□□□□□ -2.13
LRRTM4-201ENST00000409088 PLAC4Q8WY50 150 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms