RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 S4R3F8 94 aa6.54□□□□□ -1.36
ATG9A-203ENST00000409033 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
ATG9A-203ENST00000409033 RBM12B-AS1Q9P1G2 102 aa6.53□□□□□ -1.36
ATG9A-203ENST00000409033 K7ERS5 55 aa6.53□□□□□ -1.36
ATG9A-203ENST00000409033 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
ATG9A-203ENST00000409033 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
ATG9A-203ENST00000409033 KTN1-AS1Q86SY8 53 aa6.48□□□□□ -1.37
ATG9A-203ENST00000409033 EPPK1P58107 5090 aaKnown RBP6.47□□□□□ -1.37
ATG9A-203ENST00000409033 HSPG2P98160 4391 aa6.46□□□□□ -1.38
ATG9A-203ENST00000409033 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
ATG9A-203ENST00000409033 CRIPTQ9P021 101 aa6.46□□□□□ -1.38
ATG9A-203ENST00000409033 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
ATG9A-203ENST00000409033 SPINT4Q6UDR6 99 aa6.42□□□□□ -1.38
ATG9A-203ENST00000409033 A6NN06 94 aa6.41□□□□□ -1.38
ATG9A-203ENST00000409033 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
ATG9A-203ENST00000409033 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
ATG9A-203ENST00000409033 H0YAA0 97 aa6.37□□□□□ -1.39
ATG9A-203ENST00000409033 PKHD1L1Q86WI1 4243 aa6.36□□□□□ -1.39
ATG9A-203ENST00000409033 LRP2P98164 4655 aa6.35□□□□□ -1.39
ATG9A-203ENST00000409033 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
ATG9A-203ENST00000409033 P0C880 135 aa6.32□□□□□ -1.4
ATG9A-203ENST00000409033 LPAP08519 4548 aa6.28□□□□□ -1.4
ATG9A-203ENST00000409033 M0QZ58 72 aa6.24□□□□□ -1.41
ATG9A-203ENST00000409033 HERC2O95714 4834 aa6.24□□□□□ -1.41
ATG9A-203ENST00000409033 R4GN34 69 aa6.24□□□□□ -1.41
ATG9A-203ENST00000409033 TNXBP22105 4242 aa6.22□□□□□ -1.41
ATG9A-203ENST00000409033 ABCA13Q86UQ4 5058 aa6.21□□□□□ -1.41
ATG9A-203ENST00000409033 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
ATG9A-203ENST00000409033 M0R2T5 61 aa6.18□□□□□ -1.42
ATG9A-203ENST00000409033 KRTAP13-4Q3LI77 160 aa6.17□□□□□ -1.42
ATG9A-203ENST00000409033 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
ATG9A-203ENST00000409033 ROMO1P60602 79 aa6.07□□□□□ -1.44
ATG9A-203ENST00000409033 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
ATG9A-203ENST00000409033 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
ATG9A-203ENST00000409033 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
ATG9A-203ENST00000409033 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
ATG9A-203ENST00000409033 MUC2Q02817 5179 aa6.04□□□□□ -1.44
ATG9A-203ENST00000409033 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
ATG9A-203ENST00000409033 HERC1Q15751 4861 aa5.98□□□□□ -1.45
ATG9A-203ENST00000409033 KRTAP25-1Q3LHN0 102 aa5.96□□□□□ -1.46
ATG9A-203ENST00000409033 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
ATG9A-203ENST00000409033 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
ATG9A-203ENST00000409033 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
ATG9A-203ENST00000409033 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
ATG9A-203ENST00000409033 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
ATG9A-203ENST00000409033 FAT4Q6V0I7 4981 aa5.79□□□□□ -1.48
ATG9A-203ENST00000409033 KRTAP10-10P60014 251 aa5.75□□□□□ -1.49
ATG9A-203ENST00000409033 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
ATG9A-203ENST00000409033 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
ATG9A-203ENST00000409033 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
ATG9A-203ENST00000409033 HMCN2Q8NDA2 5059 aa5.61□□□□□ -1.51
ATG9A-203ENST00000409033 KRTAP19-2Q3LHN2 52 aa5.54□□□□□ -1.52
ATG9A-203ENST00000409033 TNP1P09430 55 aa5.54□□□□□ -1.52
ATG9A-203ENST00000409033 MT1HP80294 61 aa5.5□□□□□ -1.53
ATG9A-203ENST00000409033 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
ATG9A-203ENST00000409033 FLGP20930 4061 aaPredicted RBP5.46□□□□□ -1.54
ATG9A-203ENST00000409033 LCE2CQ5TA81 110 aa5.46□□□□□ -1.54
ATG9A-203ENST00000409033 H3BS24 57 aa5.45□□□□□ -1.54
ATG9A-203ENST00000409033 MT1FP04733 61 aa5.4□□□□□ -1.54
ATG9A-203ENST00000409033 MT2AP02795 61 aa5.39□□□□□ -1.55
ATG9A-203ENST00000409033 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
ATG9A-203ENST00000409033 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
ATG9A-203ENST00000409033 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
ATG9A-203ENST00000409033 FSIP2Q5CZC0 6907 aa5.29□□□□□ -1.56
ATG9A-203ENST00000409033 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
ATG9A-203ENST00000409033 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
ATG9A-203ENST00000409033 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
ATG9A-203ENST00000409033 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
ATG9A-203ENST00000409033 USH2AO75445 5202 aa5.17□□□□□ -1.58
ATG9A-203ENST00000409033 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
ATG9A-203ENST00000409033 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
ATG9A-203ENST00000409033 MT1BP07438 61 aa5.06□□□□□ -1.6
ATG9A-203ENST00000409033 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
ATG9A-203ENST00000409033 MT1XP80297 61 aa4.99□□□□□ -1.61
ATG9A-203ENST00000409033 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
ATG9A-203ENST00000409033 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
ATG9A-203ENST00000409033 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
ATG9A-203ENST00000409033 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
ATG9A-203ENST00000409033 LCE2BO14633 110 aa4.94□□□□□ -1.62
ATG9A-203ENST00000409033 KMT2DO14686 5537 aa4.93□□□□□ -1.62
ATG9A-203ENST00000409033 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
ATG9A-203ENST00000409033 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
ATG9A-203ENST00000409033 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
ATG9A-203ENST00000409033 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
ATG9A-203ENST00000409033 LCE2AQ5TA79 106 aaPredicted RBP4.82□□□□□ -1.64
ATG9A-203ENST00000409033 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
ATG9A-203ENST00000409033 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
ATG9A-203ENST00000409033 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
ATG9A-203ENST00000409033 SSPOA2VEC9 5147 aa4.59□□□□□ -1.67
ATG9A-203ENST00000409033 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
ATG9A-203ENST00000409033 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
ATG9A-203ENST00000409033 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
ATG9A-203ENST00000409033 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
ATG9A-203ENST00000409033 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
ATG9A-203ENST00000409033 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
ATG9A-203ENST00000409033 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
ATG9A-203ENST00000409033 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
ATG9A-203ENST00000409033 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.71
ATG9A-203ENST00000409033 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
ATG9A-203ENST00000409033 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms