RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
SNORD88B-201ENST00000408454 PCP4L1A6NKN8 68 aa5.81□□□□□ -1.48
SNORD88B-201ENST00000408454 H0Y9P7 68 aa5.8□□□□□ -1.48
SNORD88B-201ENST00000408454 MP68P56378 58 aa5.8□□□□□ -1.48
SNORD88B-201ENST00000408454 H0YAA0 97 aa5.79□□□□□ -1.48
SNORD88B-201ENST00000408454 KRTAP19-8Q3LI54 63 aa5.78□□□□□ -1.48
SNORD88B-201ENST00000408454 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
SNORD88B-201ENST00000408454 C20orf197Q8N268 126 aa5.76□□□□□ -1.49
SNORD88B-201ENST00000408454 J3QR89 54 aa5.74□□□□□ -1.49
SNORD88B-201ENST00000408454 H3BPC8 53 aa5.71□□□□□ -1.5
SNORD88B-201ENST00000408454 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
SNORD88B-201ENST00000408454 LINC00208Q96KT6 92 aa5.7□□□□□ -1.5
SNORD88B-201ENST00000408454 KRTAP3-3Q9BYR6 98 aa5.7□□□□□ -1.5
SNORD88B-201ENST00000408454 MT1BP07438 61 aa5.69□□□□□ -1.5
SNORD88B-201ENST00000408454 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
SNORD88B-201ENST00000408454 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
SNORD88B-201ENST00000408454 SCGB1A1P11684 91 aa5.64□□□□□ -1.51
SNORD88B-201ENST00000408454 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
SNORD88B-201ENST00000408454 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
SNORD88B-201ENST00000408454 A0A087WVE0 104 aa5.61□□□□□ -1.51
SNORD88B-201ENST00000408454 R4GN34 69 aa5.61□□□□□ -1.51
SNORD88B-201ENST00000408454 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
SNORD88B-201ENST00000408454 SPTSSBQ8NFR3 76 aa5.59□□□□□ -1.51
SNORD88B-201ENST00000408454 SMIM20Q8N5G0 67 aa5.54□□□□□ -1.52
SNORD88B-201ENST00000408454 DMAC1Q96GE9 116 aa5.53□□□□□ -1.52
SNORD88B-201ENST00000408454 TRAV7A0A075B6U4 112 aa5.52□□□□□ -1.53
SNORD88B-201ENST00000408454 KRTAP5-9P26371 169 aa5.51□□□□□ -1.53
SNORD88B-201ENST00000408454 ACYP2P14621 99 aa5.49□□□□□ -1.53
SNORD88B-201ENST00000408454 M0QZ58 72 aa5.48□□□□□ -1.53
SNORD88B-201ENST00000408454 KRTAP20-1Q3LI63 56 aa5.46□□□□□ -1.54
SNORD88B-201ENST00000408454 A0A1B0GV90 55 aa5.45□□□□□ -1.54
SNORD88B-201ENST00000408454 CHKB-CPT1BH3BT56 60 aa5.43□□□□□ -1.54
SNORD88B-201ENST00000408454 MT-ATP8P03928 68 aa5.41□□□□□ -1.54
SNORD88B-201ENST00000408454 K7ERU9 68 aa5.4□□□□□ -1.54
SNORD88B-201ENST00000408454 LINC01554Q52M75 96 aa5.39□□□□□ -1.55
SNORD88B-201ENST00000408454 NEBP20929 6669 aa5.39□□□□□ -1.55
SNORD88B-201ENST00000408454 KRTAP12-2P59991 146 aa5.38□□□□□ -1.55
SNORD88B-201ENST00000408454 P0C880 135 aa5.37□□□□□ -1.55
SNORD88B-201ENST00000408454 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
SNORD88B-201ENST00000408454 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
SNORD88B-201ENST00000408454 MT1XP80297 61 aa5.34□□□□□ -1.55
SNORD88B-201ENST00000408454 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
SNORD88B-201ENST00000408454 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
SNORD88B-201ENST00000408454 SPRR2EP22531 72 aa5.3□□□□□ -1.56
SNORD88B-201ENST00000408454 SPRR2BP35325 72 aa5.3□□□□□ -1.56
SNORD88B-201ENST00000408454 SPRR2AP35326 72 aa5.3□□□□□ -1.56
SNORD88B-201ENST00000408454 SPANXA2-OT1Q8N9U9 137 aa5.28□□□□□ -1.56
SNORD88B-201ENST00000408454 KRTAP3-2Q9BYR7 98 aa5.27□□□□□ -1.57
SNORD88B-201ENST00000408454 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
SNORD88B-201ENST00000408454 SEC61GP60059 68 aa5.23□□□□□ -1.57
SNORD88B-201ENST00000408454 KMT2DO14686 5537 aa5.22□□□□□ -1.57
SNORD88B-201ENST00000408454 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
SNORD88B-201ENST00000408454 SERP2Q8N6R1 65 aa5.18□□□□□ -1.58
SNORD88B-201ENST00000408454 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
SNORD88B-201ENST00000408454 SERP1Q9Y6X1 66 aa5.17□□□□□ -1.58
SNORD88B-201ENST00000408454 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.59
SNORD88B-201ENST00000408454 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
SNORD88B-201ENST00000408454 SPRR2DP22532 72 aa5.14□□□□□ -1.59
SNORD88B-201ENST00000408454 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
SNORD88B-201ENST00000408454 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
SNORD88B-201ENST00000408454 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
SNORD88B-201ENST00000408454 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
SNORD88B-201ENST00000408454 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
SNORD88B-201ENST00000408454 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
SNORD88B-201ENST00000408454 COA5Q86WW8 74 aa5.04□□□□□ -1.6
SNORD88B-201ENST00000408454 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
SNORD88B-201ENST00000408454 A0A1B0GU33 70 aa4.97□□□□□ -1.61
SNORD88B-201ENST00000408454 COX7CP15954 63 aa4.97□□□□□ -1.61
SNORD88B-201ENST00000408454 SMIM26A0A096LP01 95 aa4.94□□□□□ -1.62
SNORD88B-201ENST00000408454 A0A0D9SG42 100 aa4.92□□□□□ -1.62
SNORD88B-201ENST00000408454 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
SNORD88B-201ENST00000408454 SPINT4Q6UDR6 99 aa4.91□□□□□ -1.62
SNORD88B-201ENST00000408454 A0A1B0GU69 56 aa4.9□□□□□ -1.63
SNORD88B-201ENST00000408454 PRR15LQ9BU68 103 aa4.87□□□□□ -1.63
SNORD88B-201ENST00000408454 H7BZZ5 65 aa4.85□□□□□ -1.63
SNORD88B-201ENST00000408454 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
SNORD88B-201ENST00000408454 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
SNORD88B-201ENST00000408454 ATP5EP56381 51 aaPredicted RBP4.82□□□□□ -1.64
SNORD88B-201ENST00000408454 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
SNORD88B-201ENST00000408454 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
SNORD88B-201ENST00000408454 ANAPC13Q9BS18 74 aa4.79□□□□□ -1.64
SNORD88B-201ENST00000408454 MT1EP04732 61 aa4.77□□□□□ -1.65
SNORD88B-201ENST00000408454 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
SNORD88B-201ENST00000408454 TNP1P09430 55 aa4.76□□□□□ -1.65
SNORD88B-201ENST00000408454 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
SNORD88B-201ENST00000408454 MT1GP13640 62 aa4.74□□□□□ -1.65
SNORD88B-201ENST00000408454 CYSTM1Q9H1C7 97 aa4.74□□□□□ -1.65
SNORD88B-201ENST00000408454 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
SNORD88B-201ENST00000408454 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
SNORD88B-201ENST00000408454 UQCR11O14957 56 aa4.62□□□□□ -1.67
SNORD88B-201ENST00000408454 A8MU10 97 aa4.6□□□□□ -1.67
SNORD88B-201ENST00000408454 K7ERS5 55 aa4.6□□□□□ -1.67
SNORD88B-201ENST00000408454 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
SNORD88B-201ENST00000408454 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
SNORD88B-201ENST00000408454 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
SNORD88B-201ENST00000408454 TMEM258P61165 79 aa4.57□□□□□ -1.68
SNORD88B-201ENST00000408454 MT1MQ8N339 61 aa4.55□□□□□ -1.68
SNORD88B-201ENST00000408454 MT1LQ93083 61 aa4.54□□□□□ -1.68
SNORD88B-201ENST00000408454 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
SNORD88B-201ENST00000408454 CCDC179H3BU77 68 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms