RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 SPATA8Q6RVD6 105 aa8.53□□□□□ -1.04
PIKFYVE-204ENST00000407449 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
PIKFYVE-204ENST00000407449 A6NN06 94 aa8.46□□□□□ -1.06
PIKFYVE-204ENST00000407449 KTN1-AS1Q86SY8 53 aa8.43□□□□□ -1.06
PIKFYVE-204ENST00000407449 S4R3F8 94 aa8.41□□□□□ -1.06
PIKFYVE-204ENST00000407449 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.07
PIKFYVE-204ENST00000407449 ABCA13Q86UQ4 5058 aa8.39□□□□□ -1.07
PIKFYVE-204ENST00000407449 A0A1B0GU33 70 aa8.37□□□□□ -1.07
PIKFYVE-204ENST00000407449 J3QL48 77 aa8.37□□□□□ -1.07
PIKFYVE-204ENST00000407449 H1FX-AS1Q4G0G2 97 aa8.37□□□□□ -1.07
PIKFYVE-204ENST00000407449 LRP2P98164 4655 aa8.36□□□□□ -1.07
PIKFYVE-204ENST00000407449 RBM12B-AS1Q9P1G2 102 aa8.32□□□□□ -1.08
PIKFYVE-204ENST00000407449 HERC2O95714 4834 aa8.32□□□□□ -1.08
PIKFYVE-204ENST00000407449 BIRC6Q9NR09 4857 aa8.32□□□□□ -1.08
PIKFYVE-204ENST00000407449 H0YAA0 97 aa8.32□□□□□ -1.08
PIKFYVE-204ENST00000407449 LPAP08519 4548 aa8.3□□□□□ -1.08
PIKFYVE-204ENST00000407449 SEC61BP60468 96 aaKnown RBP8.29□□□□□ -1.08
PIKFYVE-204ENST00000407449 KRTAP10-6P60371 365 aaPredicted RBP8.23□□□□□ -1.09
PIKFYVE-204ENST00000407449 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.1
PIKFYVE-204ENST00000407449 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
PIKFYVE-204ENST00000407449 MUC17Q685J3 4493 aa8.1□□□□□ -1.11
PIKFYVE-204ENST00000407449 P0C880 135 aa8.1□□□□□ -1.11
PIKFYVE-204ENST00000407449 ADM2Q7Z4H4 148 aa8.09□□□□□ -1.11
PIKFYVE-204ENST00000407449 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
PIKFYVE-204ENST00000407449 KRTAP13-4Q3LI77 160 aa8.07□□□□□ -1.12
PIKFYVE-204ENST00000407449 K7ERS5 55 aa8.04□□□□□ -1.12
PIKFYVE-204ENST00000407449 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
PIKFYVE-204ENST00000407449 A0A0D9SG42 100 aa7.96□□□□□ -1.13
PIKFYVE-204ENST00000407449 KRTAP19-2Q3LHN2 52 aa7.95□□□□□ -1.14
PIKFYVE-204ENST00000407449 M0QZ58 72 aa7.92□□□□□ -1.14
PIKFYVE-204ENST00000407449 PCLOQ9Y6V0 5065 aa7.9□□□□□ -1.14
PIKFYVE-204ENST00000407449 HMCN2Q8NDA2 5059 aa7.86□□□□□ -1.15
PIKFYVE-204ENST00000407449 HERC1Q15751 4861 aa7.84□□□□□ -1.15
PIKFYVE-204ENST00000407449 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
PIKFYVE-204ENST00000407449 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
PIKFYVE-204ENST00000407449 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
PIKFYVE-204ENST00000407449 ROMO1P60602 79 aa7.79□□□□□ -1.16
PIKFYVE-204ENST00000407449 R4GN34 69 aa7.76□□□□□ -1.17
PIKFYVE-204ENST00000407449 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
PIKFYVE-204ENST00000407449 FLGP20930 4061 aaPredicted RBP7.72□□□□□ -1.17
PIKFYVE-204ENST00000407449 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
PIKFYVE-204ENST00000407449 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
PIKFYVE-204ENST00000407449 MUC2Q02817 5179 aa7.65□□□□□ -1.19
PIKFYVE-204ENST00000407449 LCE2CQ5TA81 110 aa7.6□□□□□ -1.19
PIKFYVE-204ENST00000407449 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
PIKFYVE-204ENST00000407449 RNF213Q63HN8 5207 aa7.49□□□□□ -1.21
PIKFYVE-204ENST00000407449 MT1HP80294 61 aa7.41□□□□□ -1.22
PIKFYVE-204ENST00000407449 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
PIKFYVE-204ENST00000407449 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
PIKFYVE-204ENST00000407449 M0R2T5 61 aa7.38□□□□□ -1.23
PIKFYVE-204ENST00000407449 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.23
PIKFYVE-204ENST00000407449 CAMK2N1Q7Z7J9 78 aa7.32□□□□□ -1.24
PIKFYVE-204ENST00000407449 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
PIKFYVE-204ENST00000407449 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
PIKFYVE-204ENST00000407449 MT2AP02795 61 aa7.23□□□□□ -1.25
PIKFYVE-204ENST00000407449 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
PIKFYVE-204ENST00000407449 MT1FP04733 61 aa7.19□□□□□ -1.26
PIKFYVE-204ENST00000407449 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
PIKFYVE-204ENST00000407449 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
PIKFYVE-204ENST00000407449 PLAC4Q8WY50 150 aa7.13□□□□□ -1.27
PIKFYVE-204ENST00000407449 H3BS24 57 aa7.09□□□□□ -1.27
PIKFYVE-204ENST00000407449 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
PIKFYVE-204ENST00000407449 TNP1P09430 55 aa7.03□□□□□ -1.28
PIKFYVE-204ENST00000407449 KRTAP19-8Q3LI54 63 aa7.02□□□□□ -1.28
PIKFYVE-204ENST00000407449 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
PIKFYVE-204ENST00000407449 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
PIKFYVE-204ENST00000407449 KRTAP9-3Q9BYQ3 159 aa6.92□□□□□ -1.3
PIKFYVE-204ENST00000407449 MT1BP07438 61 aa6.9□□□□□ -1.3
PIKFYVE-204ENST00000407449 LCE2AQ5TA79 106 aaPredicted RBP6.81□□□□□ -1.32
PIKFYVE-204ENST00000407449 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
PIKFYVE-204ENST00000407449 MT1XP80297 61 aa6.77□□□□□ -1.33
PIKFYVE-204ENST00000407449 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
PIKFYVE-204ENST00000407449 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
PIKFYVE-204ENST00000407449 LCE2BO14633 110 aa6.66□□□□□ -1.34
PIKFYVE-204ENST00000407449 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
PIKFYVE-204ENST00000407449 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
PIKFYVE-204ENST00000407449 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
PIKFYVE-204ENST00000407449 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
PIKFYVE-204ENST00000407449 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
PIKFYVE-204ENST00000407449 USH2AO75445 5202 aa6.41□□□□□ -1.38
PIKFYVE-204ENST00000407449 LUZP6Q538Z0 58 aa6.4□□□□□ -1.39
PIKFYVE-204ENST00000407449 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
PIKFYVE-204ENST00000407449 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
PIKFYVE-204ENST00000407449 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
PIKFYVE-204ENST00000407449 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
PIKFYVE-204ENST00000407449 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
PIKFYVE-204ENST00000407449 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.43
PIKFYVE-204ENST00000407449 KMT2DO14686 5537 aa6.06□□□□□ -1.44
PIKFYVE-204ENST00000407449 A0A0A0MQY5 61 aa6.05□□□□□ -1.44
PIKFYVE-204ENST00000407449 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
PIKFYVE-204ENST00000407449 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
PIKFYVE-204ENST00000407449 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
PIKFYVE-204ENST00000407449 MT1EP04732 61 aa5.91□□□□□ -1.46
PIKFYVE-204ENST00000407449 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.47
PIKFYVE-204ENST00000407449 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
PIKFYVE-204ENST00000407449 MT1LQ93083 61 aa5.85□□□□□ -1.47
PIKFYVE-204ENST00000407449 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
PIKFYVE-204ENST00000407449 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
PIKFYVE-204ENST00000407449 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
PIKFYVE-204ENST00000407449 KRTAP9-6A8MVA2 160 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms