RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
LSP1-204ENST00000406638 MYCBP2O75592 4640 aa8.79□□□□□ -1
LSP1-204ENST00000406638 P0C880 135 aa8.76□□□□□ -1.01
LSP1-204ENST00000406638 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
LSP1-204ENST00000406638 TNXBP22105 4242 aa8.73□□□□□ -1.01
LSP1-204ENST00000406638 K7ERS5 55 aa8.68□□□□□ -1.02
LSP1-204ENST00000406638 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
LSP1-204ENST00000406638 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
LSP1-204ENST00000406638 KRTAP4-5Q9BYR2 181 aa8.67□□□□□ -1.02
LSP1-204ENST00000406638 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.03
LSP1-204ENST00000406638 C9orf92A6NGG3 77 aa8.64□□□□□ -1.03
LSP1-204ENST00000406638 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
LSP1-204ENST00000406638 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
LSP1-204ENST00000406638 RPS29P62273 56 aaKnown RBP8.55□□□□□ -1.04
LSP1-204ENST00000406638 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
LSP1-204ENST00000406638 MT1HL1P0DM35 61 aa8.53□□□□□ -1.04
LSP1-204ENST00000406638 TPRXLQ17RH7 258 aa8.52□□□□□ -1.05
LSP1-204ENST00000406638 A0A0A0MQY5 61 aa8.5□□□□□ -1.05
LSP1-204ENST00000406638 A0A0D9SG42 100 aa8.5□□□□□ -1.05
LSP1-204ENST00000406638 C20orf166-AS1Q96NR2 134 aa8.49□□□□□ -1.05
LSP1-204ENST00000406638 RPL37P61927 97 aaKnown RBP8.48□□□□□ -1.05
LSP1-204ENST00000406638 C10orf95Q9H7T3 257 aa8.48□□□□□ -1.05
LSP1-204ENST00000406638 BIRC6Q9NR09 4857 aa8.46□□□□□ -1.06
LSP1-204ENST00000406638 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
LSP1-204ENST00000406638 HERC2O95714 4834 aa8.42□□□□□ -1.06
LSP1-204ENST00000406638 NDUFAF8A1L188 74 aa8.42□□□□□ -1.06
LSP1-204ENST00000406638 KRTAP10-6P60371 365 aaPredicted RBP8.4□□□□□ -1.07
LSP1-204ENST00000406638 LPAP08519 4548 aa8.34□□□□□ -1.07
LSP1-204ENST00000406638 KRTAP15-1Q3LI76 137 aa8.33□□□□□ -1.08
LSP1-204ENST00000406638 KRTAP3-3Q9BYR6 98 aa8.3□□□□□ -1.08
LSP1-204ENST00000406638 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
LSP1-204ENST00000406638 LRP2P98164 4655 aa8.27□□□□□ -1.09
LSP1-204ENST00000406638 XP32Q5T750 250 aa8.23□□□□□ -1.09
LSP1-204ENST00000406638 PCLOQ9Y6V0 5065 aa8.23□□□□□ -1.09
LSP1-204ENST00000406638 S4R3F8 94 aa8.22□□□□□ -1.09
LSP1-204ENST00000406638 KRTAP12-2P59991 146 aa8.21□□□□□ -1.09
LSP1-204ENST00000406638 J3QL48 77 aa8.16□□□□□ -1.1
LSP1-204ENST00000406638 HERC1Q15751 4861 aa8.12□□□□□ -1.11
LSP1-204ENST00000406638 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
LSP1-204ENST00000406638 MUC2Q02817 5179 aa7.9□□□□□ -1.14
LSP1-204ENST00000406638 HMCN2Q8NDA2 5059 aa7.89□□□□□ -1.15
LSP1-204ENST00000406638 KRTAP4-1Q9BYQ7 146 aa7.88□□□□□ -1.15
LSP1-204ENST00000406638 MUC17Q685J3 4493 aa7.81□□□□□ -1.16
LSP1-204ENST00000406638 M0QZ58 72 aa7.81□□□□□ -1.16
LSP1-204ENST00000406638 PLAC4Q8WY50 150 aa7.76□□□□□ -1.17
LSP1-204ENST00000406638 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
LSP1-204ENST00000406638 LUZP6Q538Z0 58 aa7.72□□□□□ -1.17
LSP1-204ENST00000406638 UBR4Q5T4S7 5183 aa7.68□□□□□ -1.18
LSP1-204ENST00000406638 RNF213Q63HN8 5207 aa7.64□□□□□ -1.19
LSP1-204ENST00000406638 R4GN34 69 aa7.62□□□□□ -1.19
LSP1-204ENST00000406638 KRTAP19-2Q3LHN2 52 aa7.58□□□□□ -1.2
LSP1-204ENST00000406638 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
LSP1-204ENST00000406638 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
LSP1-204ENST00000406638 FLGP20930 4061 aaPredicted RBP7.39□□□□□ -1.23
LSP1-204ENST00000406638 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
LSP1-204ENST00000406638 PP632Q6XCG6 107 aa7.33□□□□□ -1.24
LSP1-204ENST00000406638 CAMK2N1Q7Z7J9 78 aa7.32□□□□□ -1.24
LSP1-204ENST00000406638 MT1HP80294 61 aa7.18□□□□□ -1.26
LSP1-204ENST00000406638 M0R2T5 61 aa7.13□□□□□ -1.27
LSP1-204ENST00000406638 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
LSP1-204ENST00000406638 TNP1P09430 55 aa7.04□□□□□ -1.28
LSP1-204ENST00000406638 MT1FP04733 61 aa6.95□□□□□ -1.3
LSP1-204ENST00000406638 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
LSP1-204ENST00000406638 MT2AP02795 61 aa6.94□□□□□ -1.3
LSP1-204ENST00000406638 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
LSP1-204ENST00000406638 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
LSP1-204ENST00000406638 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
LSP1-204ENST00000406638 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
LSP1-204ENST00000406638 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
LSP1-204ENST00000406638 SPRR2GQ9BYE4 73 aa6.75□□□□□ -1.33
LSP1-204ENST00000406638 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
LSP1-204ENST00000406638 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
LSP1-204ENST00000406638 USH2AO75445 5202 aa6.62□□□□□ -1.35
LSP1-204ENST00000406638 MT1BP07438 61 aa6.57□□□□□ -1.36
LSP1-204ENST00000406638 INE1O15225 51 aa6.56□□□□□ -1.36
LSP1-204ENST00000406638 LCE2BO14633 110 aa6.54□□□□□ -1.36
LSP1-204ENST00000406638 KRTAP19-8Q3LI54 63 aa6.53□□□□□ -1.36
LSP1-204ENST00000406638 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
LSP1-204ENST00000406638 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.39
LSP1-204ENST00000406638 MT1XP80297 61 aa6.39□□□□□ -1.39
LSP1-204ENST00000406638 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
LSP1-204ENST00000406638 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
LSP1-204ENST00000406638 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
LSP1-204ENST00000406638 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
LSP1-204ENST00000406638 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
LSP1-204ENST00000406638 KMT2DO14686 5537 aa6.2□□□□□ -1.42
LSP1-204ENST00000406638 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
LSP1-204ENST00000406638 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
LSP1-204ENST00000406638 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
LSP1-204ENST00000406638 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
LSP1-204ENST00000406638 KRTAP19-6Q3LI70 58 aa5.93□□□□□ -1.46
LSP1-204ENST00000406638 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
LSP1-204ENST00000406638 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.47
LSP1-204ENST00000406638 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
LSP1-204ENST00000406638 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
LSP1-204ENST00000406638 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
LSP1-204ENST00000406638 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
LSP1-204ENST00000406638 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
LSP1-204ENST00000406638 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
LSP1-204ENST00000406638 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms