RNA–Protein interactions for RNA: ENST00000406453.3

SLC29A4-203, Transcript of solute carrier family 29 member 4, humanhuman

TSL 1 (best) BASIC

Gene SLC29A4, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-203ENST00000406453 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
SLC29A4-203ENST00000406453 LPAP08519 4548 aa7.81□□□□□ -1.16
SLC29A4-203ENST00000406453 HERC2O95714 4834 aa7.79□□□□□ -1.16
SLC29A4-203ENST00000406453 XP32Q5T750 250 aa7.77□□□□□ -1.17
SLC29A4-203ENST00000406453 LRP2P98164 4655 aa7.76□□□□□ -1.17
SLC29A4-203ENST00000406453 DMAC1Q96GE9 116 aa7.75□□□□□ -1.17
SLC29A4-203ENST00000406453 ACYP2P14621 99 aa7.72□□□□□ -1.17
SLC29A4-203ENST00000406453 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
SLC29A4-203ENST00000406453 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
SLC29A4-203ENST00000406453 PCLOQ9Y6V0 5065 aa7.66□□□□□ -1.18
SLC29A4-203ENST00000406453 CSAG1Q6PB30 78 aa7.65□□□□□ -1.18
SLC29A4-203ENST00000406453 J3QL48 77 aa7.62□□□□□ -1.19
SLC29A4-203ENST00000406453 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
SLC29A4-203ENST00000406453 TPRXLQ17RH7 258 aa7.58□□□□□ -1.2
SLC29A4-203ENST00000406453 A0A1B0GU69 56 aa7.57□□□□□ -1.2
SLC29A4-203ENST00000406453 MIR22HGQ0VDD5 57 aa7.53□□□□□ -1.2
SLC29A4-203ENST00000406453 HERC1Q15751 4861 aa7.53□□□□□ -1.2
SLC29A4-203ENST00000406453 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
SLC29A4-203ENST00000406453 ROMO1P60602 79 aa7.5□□□□□ -1.21
SLC29A4-203ENST00000406453 UQCR11O14957 56 aa7.49□□□□□ -1.21
SLC29A4-203ENST00000406453 P0C880 135 aa7.4□□□□□ -1.22
SLC29A4-203ENST00000406453 MUC2Q02817 5179 aa7.4□□□□□ -1.22
SLC29A4-203ENST00000406453 KRTAP4-1Q9BYQ7 146 aa7.37□□□□□ -1.23
SLC29A4-203ENST00000406453 MUC17Q685J3 4493 aa7.36□□□□□ -1.23
SLC29A4-203ENST00000406453 KRTAP25-1Q3LHN0 102 aa7.36□□□□□ -1.23
SLC29A4-203ENST00000406453 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
SLC29A4-203ENST00000406453 HMCN2Q8NDA2 5059 aa7.32□□□□□ -1.24
SLC29A4-203ENST00000406453 SEC61BP60468 96 aaKnown RBP7.29□□□□□ -1.24
SLC29A4-203ENST00000406453 S4R3F8 94 aa7.28□□□□□ -1.24
SLC29A4-203ENST00000406453 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
SLC29A4-203ENST00000406453 H0YAA0 97 aa7.19□□□□□ -1.26
SLC29A4-203ENST00000406453 A0A1B0GU33 70 aa7.14□□□□□ -1.27
SLC29A4-203ENST00000406453 KRTAP10-6P60371 365 aaPredicted RBP7.14□□□□□ -1.27
SLC29A4-203ENST00000406453 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
SLC29A4-203ENST00000406453 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
SLC29A4-203ENST00000406453 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
SLC29A4-203ENST00000406453 RNF213Q63HN8 5207 aa7.11□□□□□ -1.27
SLC29A4-203ENST00000406453 NDUFAF8A1L188 74 aa7.11□□□□□ -1.27
SLC29A4-203ENST00000406453 KRTAP13-4Q3LI77 160 aa7.05□□□□□ -1.28
SLC29A4-203ENST00000406453 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
SLC29A4-203ENST00000406453 FAT4Q6V0I7 4981 aa7.04□□□□□ -1.28
SLC29A4-203ENST00000406453 SPINT4Q6UDR6 99 aa7.01□□□□□ -1.29
SLC29A4-203ENST00000406453 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.3
SLC29A4-203ENST00000406453 A0A0D9SG42 100 aa6.95□□□□□ -1.3
SLC29A4-203ENST00000406453 LUZP6Q538Z0 58 aa6.95□□□□□ -1.3
SLC29A4-203ENST00000406453 K7ERS5 55 aa6.94□□□□□ -1.3
SLC29A4-203ENST00000406453 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
SLC29A4-203ENST00000406453 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
SLC29A4-203ENST00000406453 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
SLC29A4-203ENST00000406453 M0QZ58 72 aa6.78□□□□□ -1.32
SLC29A4-203ENST00000406453 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
SLC29A4-203ENST00000406453 R4GN34 69 aa6.74□□□□□ -1.33
SLC29A4-203ENST00000406453 MT1HP80294 61 aa6.72□□□□□ -1.33
SLC29A4-203ENST00000406453 KRTAP12-1P59990 96 aa6.7□□□□□ -1.34
SLC29A4-203ENST00000406453 M0R2T5 61 aa6.69□□□□□ -1.34
SLC29A4-203ENST00000406453 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
SLC29A4-203ENST00000406453 MT1FP04733 61 aa6.51□□□□□ -1.37
SLC29A4-203ENST00000406453 MT2AP02795 61 aa6.5□□□□□ -1.37
SLC29A4-203ENST00000406453 KRTAP9-8Q9BYQ0 159 aa6.5□□□□□ -1.37
SLC29A4-203ENST00000406453 KRTAP10-10P60014 251 aa6.46□□□□□ -1.38
SLC29A4-203ENST00000406453 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
SLC29A4-203ENST00000406453 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
SLC29A4-203ENST00000406453 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
SLC29A4-203ENST00000406453 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
SLC29A4-203ENST00000406453 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
SLC29A4-203ENST00000406453 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
SLC29A4-203ENST00000406453 MT1BP07438 61 aa6.17□□□□□ -1.42
SLC29A4-203ENST00000406453 USH2AO75445 5202 aa6.17□□□□□ -1.42
SLC29A4-203ENST00000406453 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
SLC29A4-203ENST00000406453 LCE2BO14633 110 aa6.11□□□□□ -1.43
SLC29A4-203ENST00000406453 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
SLC29A4-203ENST00000406453 MT1XP80297 61 aa6.02□□□□□ -1.45
SLC29A4-203ENST00000406453 TNP1P09430 55 aa6.01□□□□□ -1.45
SLC29A4-203ENST00000406453 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
SLC29A4-203ENST00000406453 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.47
SLC29A4-203ENST00000406453 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
SLC29A4-203ENST00000406453 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
SLC29A4-203ENST00000406453 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
SLC29A4-203ENST00000406453 KMT2DO14686 5537 aa5.82□□□□□ -1.48
SLC29A4-203ENST00000406453 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
SLC29A4-203ENST00000406453 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
SLC29A4-203ENST00000406453 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
SLC29A4-203ENST00000406453 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
SLC29A4-203ENST00000406453 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
SLC29A4-203ENST00000406453 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
SLC29A4-203ENST00000406453 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.51
SLC29A4-203ENST00000406453 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.51
SLC29A4-203ENST00000406453 KRTAP8-1Q8IUC2 63 aa5.61□□□□□ -1.51
SLC29A4-203ENST00000406453 INE1O15225 51 aa5.59□□□□□ -1.51
SLC29A4-203ENST00000406453 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
SLC29A4-203ENST00000406453 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
SLC29A4-203ENST00000406453 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
SLC29A4-203ENST00000406453 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
SLC29A4-203ENST00000406453 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
SLC29A4-203ENST00000406453 KRTAP9-6A0A140TA67 174 aa5.41□□□□□ -1.54
SLC29A4-203ENST00000406453 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
SLC29A4-203ENST00000406453 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
SLC29A4-203ENST00000406453 MACF1Q9UPN3 7388 aaKnown RBP5.24□□□□□ -1.57
SLC29A4-203ENST00000406453 MT1EP04732 61 aa5.24□□□□□ -1.57
SLC29A4-203ENST00000406453 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms