RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 SMR3BP02814 79 aaPredicted RBP2.03□□□□□ -2.08
RTN4-209ENST00000405240 H0YAA0 97 aa2.03□□□□□ -2.08
RTN4-209ENST00000405240 COX6B2Q6YFQ2 88 aa2.02□□□□□ -2.09
RTN4-209ENST00000405240 C9orf92A6NGG3 77 aa2.02□□□□□ -2.09
RTN4-209ENST00000405240 H1FX-AS1Q4G0G2 97 aa2.01□□□□□ -2.09
RTN4-209ENST00000405240 FLG2Q5D862 2391 aaPredicted RBP2□□□□□ -2.09
RTN4-209ENST00000405240 ADM2Q7Z4H4 148 aa2□□□□□ -2.09
RTN4-209ENST00000405240 RPL37P61927 97 aaKnown RBP2□□□□□ -2.09
RTN4-209ENST00000405240 KMT2CQ8NEZ4 4911 aaKnown RBP1.99□□□□□ -2.09
RTN4-209ENST00000405240 RYR1P21817 5038 aa1.99□□□□□ -2.09
RTN4-209ENST00000405240 A0A1B0GU33 70 aa1.99□□□□□ -2.09
RTN4-209ENST00000405240 PRAC1Q96KF2 57 aa1.99□□□□□ -2.09
RTN4-209ENST00000405240 KRTAP10-6P60371 365 aaPredicted RBP1.98□□□□□ -2.09
RTN4-209ENST00000405240 MT1HL1P0DM35 61 aa1.97□□□□□ -2.09
RTN4-209ENST00000405240 Q5VSD8 79 aa1.96□□□□□ -2.1
RTN4-209ENST00000405240 RYR3Q15413 4870 aa1.95□□□□□ -2.1
RTN4-209ENST00000405240 LINC01554Q52M75 96 aa1.95□□□□□ -2.1
RTN4-209ENST00000405240 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
RTN4-209ENST00000405240 CSAG1Q6PB30 78 aa1.94□□□□□ -2.1
RTN4-209ENST00000405240 KRTAP13-4Q3LI77 160 aa1.94□□□□□ -2.1
RTN4-209ENST00000405240 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
RTN4-209ENST00000405240 S4R3F8 94 aa1.93□□□□□ -2.1
RTN4-209ENST00000405240 TPRXLQ17RH7 258 aa1.92□□□□□ -2.1
RTN4-209ENST00000405240 LPAP08519 4548 aa1.91□□□□□ -2.1
RTN4-209ENST00000405240 MUC17Q685J3 4493 aa1.91□□□□□ -2.1
RTN4-209ENST00000405240 P0C880 135 aa1.9□□□□□ -2.11
RTN4-209ENST00000405240 ROMO1P60602 79 aa1.89□□□□□ -2.11
RTN4-209ENST00000405240 K7ERS5 55 aa1.87□□□□□ -2.11
RTN4-209ENST00000405240 KIAA1109Q2LD37 5005 aa1.87□□□□□ -2.11
RTN4-209ENST00000405240 LRP2P98164 4655 aa1.87□□□□□ -2.11
RTN4-209ENST00000405240 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
RTN4-209ENST00000405240 KRTAP12-2P59991 146 aa1.87□□□□□ -2.11
RTN4-209ENST00000405240 EPPK1P58107 5090 aaKnown RBP1.87□□□□□ -2.11
RTN4-209ENST00000405240 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
RTN4-209ENST00000405240 ABCA13Q86UQ4 5058 aa1.86□□□□□ -2.11
RTN4-209ENST00000405240 M0QZ58 72 aa1.86□□□□□ -2.11
RTN4-209ENST00000405240 KRTAP23-1A1A580 65 aa1.85□□□□□ -2.11
RTN4-209ENST00000405240 KRTAP4-5Q9BYR2 181 aa1.84□□□□□ -2.12
RTN4-209ENST00000405240 A0A0D9SG42 100 aa1.83□□□□□ -2.12
RTN4-209ENST00000405240 KRTAP4-1Q9BYQ7 146 aa1.83□□□□□ -2.12
RTN4-209ENST00000405240 LCE3BQ5TA77 95 aa1.82□□□□□ -2.12
RTN4-209ENST00000405240 FLGP20930 4061 aaPredicted RBP1.82□□□□□ -2.12
RTN4-209ENST00000405240 CRIPTQ9P021 101 aa1.81□□□□□ -2.12
RTN4-209ENST00000405240 A0A0A0MQY5 61 aa1.8□□□□□ -2.12
RTN4-209ENST00000405240 SEC61BP60468 96 aaKnown RBP1.8□□□□□ -2.12
RTN4-209ENST00000405240 KRTAP15-1Q3LI76 137 aa1.8□□□□□ -2.12
RTN4-209ENST00000405240 DMBT1Q9UGM3 2413 aaPredicted RBP1.79□□□□□ -2.12
RTN4-209ENST00000405240 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.79□□□□□ -2.12
RTN4-209ENST00000405240 KRTAP9-6A0A140TA67 174 aa1.79□□□□□ -2.12
RTN4-209ENST00000405240 C10orf95Q9H7T3 257 aa1.79□□□□□ -2.12
RTN4-209ENST00000405240 BIRC6Q9NR09 4857 aa1.78□□□□□ -2.12
RTN4-209ENST00000405240 HERC1Q15751 4861 aa1.77□□□□□ -2.13
RTN4-209ENST00000405240 HERC2O95714 4834 aa1.77□□□□□ -2.13
RTN4-209ENST00000405240 SPINT4Q6UDR6 99 aa1.77□□□□□ -2.13
RTN4-209ENST00000405240 KRTAP9-2Q9BYQ4 174 aa1.76□□□□□ -2.13
RTN4-209ENST00000405240 R4GN34 69 aa1.75□□□□□ -2.13
RTN4-209ENST00000405240 KRTAP9-8Q9BYQ0 159 aa1.72□□□□□ -2.13
RTN4-209ENST00000405240 KRTAP4-8Q9BYQ9 185 aa1.71□□□□□ -2.13
RTN4-209ENST00000405240 PP632Q6XCG6 107 aa1.7□□□□□ -2.14
RTN4-209ENST00000405240 HMCN2Q8NDA2 5059 aa1.69□□□□□ -2.14
RTN4-209ENST00000405240 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
RTN4-209ENST00000405240 SPRR2GQ9BYE4 73 aa1.68□□□□□ -2.14
RTN4-209ENST00000405240 KRTAP5-3Q6L8H2 238 aa1.68□□□□□ -2.14
RTN4-209ENST00000405240 KRTAP19-4Q3LI73 84 aa1.67□□□□□ -2.14
RTN4-209ENST00000405240 KRTAP19-1Q8IUB9 90 aa1.66□□□□□ -2.14
RTN4-209ENST00000405240 PLAC4Q8WY50 150 aa1.66□□□□□ -2.14
RTN4-209ENST00000405240 MUC2Q02817 5179 aa1.66□□□□□ -2.14
RTN4-209ENST00000405240 KRTAP9-9Q9BYP9 154 aa1.66□□□□□ -2.14
RTN4-209ENST00000405240 KRTAP9-4Q9BYQ2 154 aa1.66□□□□□ -2.14
RTN4-209ENST00000405240 KRTAP4-7Q9BYR0 210 aa1.66□□□□□ -2.14
RTN4-209ENST00000405240 NDUFAF8A1L188 74 aa1.65□□□□□ -2.14
RTN4-209ENST00000405240 SPRR5A0A1B0GTR4 108 aa1.65□□□□□ -2.15
RTN4-209ENST00000405240 KRTAP4-8A0A0G2JLE6 195 aa1.65□□□□□ -2.15
RTN4-209ENST00000405240 MT1HP80294 61 aa1.64□□□□□ -2.15
RTN4-209ENST00000405240 CAMK2N1Q7Z7J9 78 aa1.63□□□□□ -2.15
RTN4-209ENST00000405240 KRTAP19-8Q3LI54 63 aa1.62□□□□□ -2.15
RTN4-209ENST00000405240 TNP1P09430 55 aa1.62□□□□□ -2.15
RTN4-209ENST00000405240 MT2AP02795 61 aa1.61□□□□□ -2.15
RTN4-209ENST00000405240 MT1FP04733 61 aa1.61□□□□□ -2.15
RTN4-209ENST00000405240 RNF213Q63HN8 5207 aa1.6□□□□□ -2.15
RTN4-209ENST00000405240 UBR4Q5T4S7 5183 aa1.59□□□□□ -2.15
RTN4-209ENST00000405240 MT1BP07438 61 aa1.58□□□□□ -2.16
RTN4-209ENST00000405240 KRTAP10-5P60370 271 aa1.57□□□□□ -2.16
RTN4-209ENST00000405240 LCE1DQ5T752 114 aa1.57□□□□□ -2.16
RTN4-209ENST00000405240 FAT4Q6V0I7 4981 aa1.57□□□□□ -2.16
RTN4-209ENST00000405240 KRTAP9-7A8MTY7 169 aa1.57□□□□□ -2.16
RTN4-209ENST00000405240 MT1XP80297 61 aa1.56□□□□□ -2.16
RTN4-209ENST00000405240 KRTAP8-1Q8IUC2 63 aa1.56□□□□□ -2.16
RTN4-209ENST00000405240 KRTAP9-3Q9BYQ3 159 aa1.56□□□□□ -2.16
RTN4-209ENST00000405240 LCE3AQ5TA76 89 aa1.56□□□□□ -2.16
RTN4-209ENST00000405240 KRTAP4-12Q9BQ66 201 aa1.55□□□□□ -2.16
RTN4-209ENST00000405240 KRTAP10-10P60014 251 aa1.54□□□□□ -2.16
RTN4-209ENST00000405240 KRTAP4-9Q9BYQ8 210 aa1.53□□□□□ -2.16
RTN4-209ENST00000405240 LCE4AQ5TA78 99 aa1.53□□□□□ -2.16
RTN4-209ENST00000405240 LUZP6Q538Z0 58 aa1.53□□□□□ -2.17
RTN4-209ENST00000405240 KRTAP4-2Q9BYR5 136 aa1.52□□□□□ -2.17
RTN4-209ENST00000405240 M0R2T5 61 aa1.52□□□□□ -2.17
RTN4-209ENST00000405240 OBSCNQ5VST9 7968 aa1.51□□□□□ -2.17
RTN4-209ENST00000405240 LCE5AQ5TCM9 118 aa1.5□□□□□ -2.17
RTN4-209ENST00000405240 KRTAP10-7P60409 375 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms