RNA–Protein interactions for RNA: ENST00000405097.5

RDX-202, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-202ENST00000405097 H0YAA0 97 aa10.6□□□□□ -0.71
RDX-202ENST00000405097 A0A1B0GU33 70 aa10.57□□□□□ -0.72
RDX-202ENST00000405097 RPL37P61927 97 aaKnown RBP10.56□□□□□ -0.72
RDX-202ENST00000405097 XP32Q5T750 250 aa10.54□□□□□ -0.72
RDX-202ENST00000405097 H1FX-AS1Q4G0G2 97 aa10.53□□□□□ -0.72
RDX-202ENST00000405097 KIAA1109Q2LD37 5005 aa10.52□□□□□ -0.73
RDX-202ENST00000405097 MT1HL1P0DM35 61 aa10.43□□□□□ -0.74
RDX-202ENST00000405097 KRTAP3-3Q9BYR6 98 aa10.41□□□□□ -0.74
RDX-202ENST00000405097 CSAG1Q6PB30 78 aa10.32□□□□□ -0.76
RDX-202ENST00000405097 S4R3F8 94 aa10.31□□□□□ -0.76
RDX-202ENST00000405097 LPAP08519 4548 aa10.3□□□□□ -0.76
RDX-202ENST00000405097 KRTAP10-6P60371 365 aaPredicted RBP10.3□□□□□ -0.76
RDX-202ENST00000405097 EPPK1P58107 5090 aaKnown RBP10.28□□□□□ -0.76
RDX-202ENST00000405097 LRP2P98164 4655 aa10.25□□□□□ -0.77
RDX-202ENST00000405097 KRTAP3-2Q9BYR7 98 aa10.23□□□□□ -0.77
RDX-202ENST00000405097 KRTAP13-4Q3LI77 160 aa10.21□□□□□ -0.77
RDX-202ENST00000405097 LINC01554Q52M75 96 aa10.18□□□□□ -0.78
RDX-202ENST00000405097 K7ERS5 55 aa10.16□□□□□ -0.78
RDX-202ENST00000405097 A0A0D9SG42 100 aa10.14□□□□□ -0.79
RDX-202ENST00000405097 P0C880 135 aa10.14□□□□□ -0.79
RDX-202ENST00000405097 TPRXLQ17RH7 258 aa10.14□□□□□ -0.79
RDX-202ENST00000405097 ABCA13Q86UQ4 5058 aa10.11□□□□□ -0.79
RDX-202ENST00000405097 KRTAP4-5Q9BYR2 181 aa10.09□□□□□ -0.79
RDX-202ENST00000405097 CRIPTQ9P021 101 aa10.03□□□□□ -0.8
RDX-202ENST00000405097 KRTAP25-1Q3LHN0 102 aa10.02□□□□□ -0.81
RDX-202ENST00000405097 ROMO1P60602 79 aa9.94□□□□□ -0.82
RDX-202ENST00000405097 KRTAP12-2P59991 146 aa9.86□□□□□ -0.83
RDX-202ENST00000405097 SPINT4Q6UDR6 99 aa9.79□□□□□ -0.84
RDX-202ENST00000405097 MUC17Q685J3 4493 aa9.78□□□□□ -0.84
RDX-202ENST00000405097 KRTAP12-1P59990 96 aa9.78□□□□□ -0.84
RDX-202ENST00000405097 SEC61BP60468 96 aaKnown RBP9.76□□□□□ -0.85
RDX-202ENST00000405097 M0QZ58 72 aa9.74□□□□□ -0.85
RDX-202ENST00000405097 J3QL48 77 aa9.73□□□□□ -0.85
RDX-202ENST00000405097 KRTAP4-1Q9BYQ7 146 aa9.72□□□□□ -0.85
RDX-202ENST00000405097 HERC2O95714 4834 aa9.7□□□□□ -0.86
RDX-202ENST00000405097 C10orf95Q9H7T3 257 aa9.67□□□□□ -0.86
RDX-202ENST00000405097 R4GN34 69 aa9.58□□□□□ -0.88
RDX-202ENST00000405097 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
RDX-202ENST00000405097 KRTAP19-2Q3LHN2 52 aa9.5□□□□□ -0.89
RDX-202ENST00000405097 MUC2Q02817 5179 aa9.46□□□□□ -0.89
RDX-202ENST00000405097 BIRC6Q9NR09 4857 aa9.39□□□□□ -0.91
RDX-202ENST00000405097 HERC1Q15751 4861 aa9.26□□□□□ -0.93
RDX-202ENST00000405097 FLGP20930 4061 aaPredicted RBP9.24□□□□□ -0.93
RDX-202ENST00000405097 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
RDX-202ENST00000405097 HMCN2Q8NDA2 5059 aa9.17□□□□□ -0.94
RDX-202ENST00000405097 H3BS24 57 aa9.13□□□□□ -0.95
RDX-202ENST00000405097 KRTAP15-1Q3LI76 137 aa9.11□□□□□ -0.95
RDX-202ENST00000405097 CAMK2N1Q7Z7J9 78 aa9.09□□□□□ -0.95
RDX-202ENST00000405097 FAT4Q6V0I7 4981 aa9.03□□□□□ -0.96
RDX-202ENST00000405097 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
RDX-202ENST00000405097 NDUFAF8A1L188 74 aa8.87□□□□□ -0.99
RDX-202ENST00000405097 RNF213Q63HN8 5207 aa8.8□□□□□ -1
RDX-202ENST00000405097 UBR4Q5T4S7 5183 aa8.79□□□□□ -1
RDX-202ENST00000405097 M0R2T5 61 aa8.79□□□□□ -1
RDX-202ENST00000405097 PLAC4Q8WY50 150 aa8.79□□□□□ -1
RDX-202ENST00000405097 PP632Q6XCG6 107 aa8.78□□□□□ -1
RDX-202ENST00000405097 MT1HP80294 61 aa8.73□□□□□ -1.01
RDX-202ENST00000405097 KRTAP19-1Q8IUB9 90 aa8.71□□□□□ -1.01
RDX-202ENST00000405097 SPRR2GQ9BYE4 73 aa8.71□□□□□ -1.01
RDX-202ENST00000405097 TNP1P09430 55 aa8.71□□□□□ -1.02
RDX-202ENST00000405097 MT1FP04733 61 aa8.59□□□□□ -1.03
RDX-202ENST00000405097 MT2AP02795 61 aa8.58□□□□□ -1.04
RDX-202ENST00000405097 KRTAP10-10P60014 251 aa8.58□□□□□ -1.04
RDX-202ENST00000405097 KRTAP9-8Q9BYQ0 159 aa8.52□□□□□ -1.05
RDX-202ENST00000405097 KRTAP23-1A1A580 65 aa8.49□□□□□ -1.05
RDX-202ENST00000405097 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
RDX-202ENST00000405097 LUZP6Q538Z0 58 aa8.33□□□□□ -1.08
RDX-202ENST00000405097 LCE3AQ5TA76 89 aa8.31□□□□□ -1.08
RDX-202ENST00000405097 MT1BP07438 61 aa8.27□□□□□ -1.08
RDX-202ENST00000405097 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
RDX-202ENST00000405097 MT1XP80297 61 aa8.19□□□□□ -1.1
RDX-202ENST00000405097 SPRR5A0A1B0GTR4 108 aa8.17□□□□□ -1.1
RDX-202ENST00000405097 KRTAP9-3Q9BYQ3 159 aa8.16□□□□□ -1.1
RDX-202ENST00000405097 KRTAP8-1Q8IUC2 63 aa8.05□□□□□ -1.12
RDX-202ENST00000405097 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
RDX-202ENST00000405097 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
RDX-202ENST00000405097 KRTAP12-3P60328 96 aa7.89□□□□□ -1.15
RDX-202ENST00000405097 LCE2BO14633 110 aa7.88□□□□□ -1.15
RDX-202ENST00000405097 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
RDX-202ENST00000405097 USH2AO75445 5202 aa7.84□□□□□ -1.15
RDX-202ENST00000405097 A0A0A0MQY5 61 aa7.8□□□□□ -1.16
RDX-202ENST00000405097 LCE2AQ5TA79 106 aaPredicted RBP7.75□□□□□ -1.17
RDX-202ENST00000405097 KMT2DO14686 5537 aa7.67□□□□□ -1.18
RDX-202ENST00000405097 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
RDX-202ENST00000405097 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
RDX-202ENST00000405097 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
RDX-202ENST00000405097 LCE3CQ5T5A8 94 aa7.41□□□□□ -1.22
RDX-202ENST00000405097 KRTAP19-7Q3SYF9 63 aa7.3□□□□□ -1.24
RDX-202ENST00000405097 SSPOA2VEC9 5147 aa7.24□□□□□ -1.25
RDX-202ENST00000405097 KRTAP9-6A8MVA2 160 aa7.19□□□□□ -1.26
RDX-202ENST00000405097 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
RDX-202ENST00000405097 FSIP2Q5CZC0 6907 aa7.12□□□□□ -1.27
RDX-202ENST00000405097 MT1EP04732 61 aa7.09□□□□□ -1.27
RDX-202ENST00000405097 MT1LQ93083 61 aa7.08□□□□□ -1.28
RDX-202ENST00000405097 INE1O15225 51 aa7.06□□□□□ -1.28
RDX-202ENST00000405097 KRTAP19-6Q3LI70 58 aa7.04□□□□□ -1.28
RDX-202ENST00000405097 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
RDX-202ENST00000405097 FCGBPQ9Y6R7 5405 aaPredicted RBP6.85□□□□□ -1.31
RDX-202ENST00000405097 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
RDX-202ENST00000405097 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms