RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 PRR4Q16378 134 aa5.08□□□□□ -1.6
TPT1P4-201ENST00000403538 C4orf26Q17RF5 130 aa5.07□□□□□ -1.6
TPT1P4-201ENST00000403538 KMT2CQ8NEZ4 4911 aaKnown RBP5.07□□□□□ -1.6
TPT1P4-201ENST00000403538 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
TPT1P4-201ENST00000403538 IGKV2D-30A0A075B6S6 120 aa5.04□□□□□ -1.6
TPT1P4-201ENST00000403538 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
TPT1P4-201ENST00000403538 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
TPT1P4-201ENST00000403538 MPLKIPQ8TAP9 179 aa5.03□□□□□ -1.6
TPT1P4-201ENST00000403538 DMBT1Q9UGM3 2413 aaPredicted RBP5.03□□□□□ -1.6
TPT1P4-201ENST00000403538 FAT1Q14517 4588 aa5.02□□□□□ -1.61
TPT1P4-201ENST00000403538 CHKB-CPT1BH3BT56 60 aa5□□□□□ -1.61
TPT1P4-201ENST00000403538 SPTSSBQ8NFR3 76 aa5□□□□□ -1.61
TPT1P4-201ENST00000403538 PRO0628Q9UI54 55 aa5□□□□□ -1.61
TPT1P4-201ENST00000403538 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
TPT1P4-201ENST00000403538 MT1HL1P0DM35 61 aa4.97□□□□□ -1.61
TPT1P4-201ENST00000403538 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
TPT1P4-201ENST00000403538 C9orf92A6NGG3 77 aa4.96□□□□□ -1.62
TPT1P4-201ENST00000403538 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.62
TPT1P4-201ENST00000403538 RETNLBQ9BQ08 111 aa4.96□□□□□ -1.62
TPT1P4-201ENST00000403538 RYR1P21817 5038 aa4.95□□□□□ -1.62
TPT1P4-201ENST00000403538 HSPG2P98160 4391 aa4.95□□□□□ -1.62
TPT1P4-201ENST00000403538 SPINK7P58062 85 aa4.95□□□□□ -1.62
TPT1P4-201ENST00000403538 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
TPT1P4-201ENST00000403538 Q5VV11 94 aa4.94□□□□□ -1.62
TPT1P4-201ENST00000403538 TNXBP22105 4242 aa4.91□□□□□ -1.62
TPT1P4-201ENST00000403538 PSPHP1O15172 72 aa4.91□□□□□ -1.62
TPT1P4-201ENST00000403538 COX6B2Q6YFQ2 88 aa4.91□□□□□ -1.62
TPT1P4-201ENST00000403538 BRK1Q8WUW1 75 aa4.88□□□□□ -1.63
TPT1P4-201ENST00000403538 RYR3Q15413 4870 aa4.87□□□□□ -1.63
TPT1P4-201ENST00000403538 A0A1B0GU69 56 aa4.86□□□□□ -1.63
TPT1P4-201ENST00000403538 SEC61GP60059 68 aa4.86□□□□□ -1.63
TPT1P4-201ENST00000403538 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
TPT1P4-201ENST00000403538 CDC42SE1Q9NRR8 79 aa4.86□□□□□ -1.63
TPT1P4-201ENST00000403538 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.63
TPT1P4-201ENST00000403538 A6NED7 52 aa4.84□□□□□ -1.63
TPT1P4-201ENST00000403538 LRP1Q07954 4544 aaKnown RBP4.83□□□□□ -1.64
TPT1P4-201ENST00000403538 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
TPT1P4-201ENST00000403538 UQCR11O14957 56 aa4.81□□□□□ -1.64
TPT1P4-201ENST00000403538 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
TPT1P4-201ENST00000403538 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
TPT1P4-201ENST00000403538 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
TPT1P4-201ENST00000403538 LCA10Q71F78 164 aa4.76□□□□□ -1.65
TPT1P4-201ENST00000403538 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
TPT1P4-201ENST00000403538 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
TPT1P4-201ENST00000403538 H1FX-AS1Q4G0G2 97 aa4.74□□□□□ -1.65
TPT1P4-201ENST00000403538 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
TPT1P4-201ENST00000403538 MYCBP2O75592 4640 aa4.71□□□□□ -1.66
TPT1P4-201ENST00000403538 S4R3F8 94 aa4.7□□□□□ -1.66
TPT1P4-201ENST00000403538 KRTAP4-4Q9BYR3 166 aa4.69□□□□□ -1.66
TPT1P4-201ENST00000403538 EPPK1P58107 5090 aaKnown RBP4.68□□□□□ -1.66
TPT1P4-201ENST00000403538 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
TPT1P4-201ENST00000403538 A0A1B0GU33 70 aa4.67□□□□□ -1.66
TPT1P4-201ENST00000403538 H0YAA0 97 aa4.64□□□□□ -1.67
TPT1P4-201ENST00000403538 CSAG1Q6PB30 78 aa4.64□□□□□ -1.67
TPT1P4-201ENST00000403538 A6NN06 94 aa4.62□□□□□ -1.67
TPT1P4-201ENST00000403538 A8MU10 97 aa4.59□□□□□ -1.67
TPT1P4-201ENST00000403538 BIRC6Q9NR09 4857 aa4.59□□□□□ -1.68
TPT1P4-201ENST00000403538 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
TPT1P4-201ENST00000403538 HERC2O95714 4834 aa4.57□□□□□ -1.68
TPT1P4-201ENST00000403538 K7ERS5 55 aa4.57□□□□□ -1.68
TPT1P4-201ENST00000403538 M0QZ58 72 aa4.55□□□□□ -1.68
TPT1P4-201ENST00000403538 LRP2P98164 4655 aa4.54□□□□□ -1.68
TPT1P4-201ENST00000403538 ABCA13Q86UQ4 5058 aa4.49□□□□□ -1.69
TPT1P4-201ENST00000403538 ADM2Q7Z4H4 148 aa4.47□□□□□ -1.69
TPT1P4-201ENST00000403538 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
TPT1P4-201ENST00000403538 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
TPT1P4-201ENST00000403538 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
TPT1P4-201ENST00000403538 P0C880 135 aa4.43□□□□□ -1.7
TPT1P4-201ENST00000403538 CRIPTQ9P021 101 aa4.41□□□□□ -1.7
TPT1P4-201ENST00000403538 LPAP08519 4548 aa4.4□□□□□ -1.7
TPT1P4-201ENST00000403538 MT3P25713 68 aa4.39□□□□□ -1.71
TPT1P4-201ENST00000403538 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
TPT1P4-201ENST00000403538 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
TPT1P4-201ENST00000403538 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
TPT1P4-201ENST00000403538 R4GN34 69 aa4.36□□□□□ -1.71
TPT1P4-201ENST00000403538 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.72
TPT1P4-201ENST00000403538 ROMO1P60602 79 aa4.33□□□□□ -1.72
TPT1P4-201ENST00000403538 KRTAP12-1P59990 96 aa4.3□□□□□ -1.72
TPT1P4-201ENST00000403538 A0A0D9SG42 100 aa4.29□□□□□ -1.72
TPT1P4-201ENST00000403538 HERC1Q15751 4861 aa4.29□□□□□ -1.72
TPT1P4-201ENST00000403538 PCLOQ9Y6V0 5065 aa4.27□□□□□ -1.73
TPT1P4-201ENST00000403538 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
TPT1P4-201ENST00000403538 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
TPT1P4-201ENST00000403538 KRTAP25-1Q3LHN0 102 aa4.23□□□□□ -1.73
TPT1P4-201ENST00000403538 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
TPT1P4-201ENST00000403538 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
TPT1P4-201ENST00000403538 LINC01554Q52M75 96 aa4.19□□□□□ -1.74
TPT1P4-201ENST00000403538 MT1HP80294 61 aa4.16□□□□□ -1.74
TPT1P4-201ENST00000403538 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
TPT1P4-201ENST00000403538 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
TPT1P4-201ENST00000403538 M0R2T5 61 aa4.12□□□□□ -1.75
TPT1P4-201ENST00000403538 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
TPT1P4-201ENST00000403538 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
TPT1P4-201ENST00000403538 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
TPT1P4-201ENST00000403538 MUC2Q02817 5179 aa4.08□□□□□ -1.76
TPT1P4-201ENST00000403538 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
TPT1P4-201ENST00000403538 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
TPT1P4-201ENST00000403538 MT2AP02795 61 aa4.03□□□□□ -1.76
TPT1P4-201ENST00000403538 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
TPT1P4-201ENST00000403538 KRTAP10-10P60014 251 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms